Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:53:35 (14089): wrapper (7.7.26015): starting
01:53:35 (14089): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 01:53:35] Arguments: --nthreads 8
[2025-11-26 01:53:35] Threads: 8
[2025-11-26 01:53:35] Checking for CVMFS
[2025-11-26 01:53:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:53:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:53:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:53:36] 2.11.2.0 28641 284528 157976 153303 3 278 13200156 25165825 2893 130560 227 125951767 99.876 75049927 2586 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 01:53:36] CVMFS is ok
[2025-11-26 01:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:53:36] Checking for apptainer binary...
[2025-11-26 01:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:53:36] Running /usr/bin/apptainer --version
[2025-11-26 01:53:36] apptainer version 1.3.2-1.el7
[2025-11-26 01:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:53:37] cg-vwn402.simple-grid.lan
[2025-11-26 01:53:37] apptainer works
[2025-11-26 01:53:37] Set ATHENA_PROC_NUMBER=8
[2025-11-26 01:53:37] Set ATHENA_CORE_NUMBER=8
[2025-11-26 01:53:37] Starting ATLAS job with PandaID=6895341389
[2025-11-26 01:53:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:52:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:52:36] 2025-11-27 00:51:14,819 | INFO     | monitor loop #5740: job 0:6895341389 is in state 'finished'
[2025-11-27 01:52:36] 2025-11-27 00:51:14,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:52:36] 2025-11-27 00:51:15,819 | INFO     | PID=17821 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:52:36] 2025-11-27 00:51:15,819 | INFO     | .. there are 9 such processes running
[2025-11-27 01:52:36] 2025-11-27 00:51:16,820 | INFO     | time since job start (86241s) is within the limit (172800.0s)
[2025-11-27 01:52:36] 2025-11-27 00:51:17,324 | INFO     | monitor loop #5741: job 0:6895341389 is in state 'finished'
[2025-11-27 01:52:36] 2025-11-27 00:51:17,324 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:52:36] 2025-11-27 00:51:18,829 | INFO     | time since job start (86243s) is within the limit (172800.0s)
[2025-11-27 01:52:36] 2025-11-27 00:51:19,833 | INFO     | monitor loop #5742: job 0:6895341389 is in state 'finished'
[2025-11-27 01:52:36] 2025-11-27 00:51:19,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:52:36] 2025-11-27 00:51:20,836 | INFO     | time since job start (86245s) is within the limit (172800.0s)
[2025-11-27 01:52:36] 2025-11-27 00:51:22,340 | INFO     | monitor loop #5743: job 0:6895341389 is in state 'finished'
[2025-11-27 01:52:36] 2025-11-27 00:51:22,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:52:36] 2025-11-27 00:51:22,843 | INFO     | time since job start (86247s) is within the limit (172800.0s)
[2025-11-27 01:52:36] 2025-11-27 00:51:24,128 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:52:36] 2025-11-27 00:51:24,129 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 01:52:36] 2025-11-27 00:51:24,131 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6895341389/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:52:36] 2025-11-27 00:51:24,131 | INFO     | extracted standard info from prmon json
[2025-11-27 01:52:36] 2025-11-27 00:51:24,132 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:52:36] 2025-11-27 00:51:24,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:52:36] 2025-11-27 00:51:24,160 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:52:36] 2025-11-27 00:51:24,162 | INFO     | sum of square deviations: 872931326111.5775
[2025-11-27 01:52:36] 2025-11-27 00:51:24,223 | INFO     | sum of deviations: 2335945289373.046
[2025-11-27 01:52:36] 2025-11-27 00:51:24,223 | INFO     | mean x: 1764161523.5899434
[2025-11-27 01:52:36] 2025-11-27 00:51:24,223 | INFO     | mean y: 2850999.8342776205
[2025-11-27 01:52:36] 2025-11-27 00:51:24,223 | INFO     | intersect: -4718006961.673181
[2025-11-27 01:52:36] 2025-11-27 00:51:24,225 | INFO     | chi2: 15.108803254464847
[2025-11-27 01:52:36] 2025-11-27 00:51:24,227 | INFO     | sum of square deviations: 863691194335.6165
[2025-11-27 01:52:36] 2025-11-27 00:51:24,283 | INFO     | sum of deviations: 2804108040773.3945
[2025-11-27 01:52:36] 2025-11-27 00:51:24,284 | INFO     | mean x: 1764161371.0938165
[2025-11-27 01:52:36] 2025-11-27 00:51:24,284 | INFO     | mean y: 2858725.459132907
[2025-11-27 01:52:36] 2025-11-27 00:51:24,284 | INFO     | intersect: -5724766053.338487
[2025-11-27 01:52:36] 2025-11-27 00:51:24,286 | INFO     | chi2: 11.866256158673906
[2025-11-27 01:52:36] 2025-11-27 00:51:24,286 | INFO     | current chi2=11.866256158673906 (change=21.46130994744886 %)
[2025-11-27 01:52:36] 2025-11-27 00:51:24,286 | INFO     | right removable region: 1406
[2025-11-27 01:52:36] 2025-11-27 00:51:24,288 | INFO     | sum of square deviations: 863690255545.6168
[2025-11-27 01:52:36] 2025-11-27 00:51:24,352 | INFO     | sum of deviations: 1902373494816.538
[2025-11-27 01:52:36] 2025-11-27 00:51:24,353 | INFO     | mean x: 1764161676.0938165
[2025-11-27 01:52:36] 2025-11-27 00:51:24,353 | INFO     | mean y: 2858151.935323383
[2025-11-27 01:52:36] 2025-11-27 00:51:24,353 | INFO     | intersect: -3882903429.3990154
[2025-11-27 01:52:36] 2025-11-27 00:51:24,355 | INFO     | chi2: 12.637422640313568
[2025-11-27 01:52:36] 2025-11-27 00:51:24,355 | INFO     | current chi2=12.637422640313568 (change=16.35722282253529 %)
[2025-11-27 01:52:36] 2025-11-27 00:51:24,355 | INFO     | left removable region: 10
[2025-11-27 01:52:36] 2025-11-27 00:51:24,357 | INFO     | sum of square deviations: 843591486743.3582
[2025-11-27 01:52:36] 2025-11-27 00:51:24,416 | INFO     | sum of deviations: 2379262088420.6196
[2025-11-27 01:52:36] 2025-11-27 00:51:24,416 | INFO     | mean x: 1764161645.5988538
[2025-11-27 01:52:36] 2025-11-27 00:51:24,417 | INFO     | mean y: 2869182.136819484
[2025-11-27 01:52:36] 2025-11-27 00:51:24,417 | INFO     | intersect: -4972765336.678615
[2025-11-27 01:52:36] 2025-11-27 00:51:24,418 | INFO     | chi2: 8.584905217481632
[2025-11-27 01:52:36] 2025-11-27 00:51:24,419 | INFO     | current memory leak: 2.82 B/s (using 1396 data points, chi2=8.58)
[2025-11-27 01:52:36] 2025-11-27 00:51:24,420 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 01:52:36] 2025-11-27 00:51:24,421 | INFO     | ..............................
[2025-11-27 01:52:36] 2025-11-27 00:51:24,421 | INFO     | . Timing measurements:
[2025-11-27 01:52:36] 2025-11-27 00:51:24,421 | INFO     | . get job = 0 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,421 | INFO     | . initial setup = 2 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,421 | INFO     | . payload setup = 11 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,421 | INFO     | . stage-in = 0 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,421 | INFO     | . payload execution = 86112 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,422 | INFO     | . stage-out = 5 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,422 | INFO     | . log creation = 2 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,422 | INFO     | ..............................
[2025-11-27 01:52:36] 2025-11-27 00:51:24,673 | INFO     | 
[2025-11-27 01:52:36] 2025-11-27 00:51:24,673 | INFO     | job summary report
[2025-11-27 01:52:36] 2025-11-27 00:51:24,673 | INFO     | --------------------------------------------------
[2025-11-27 01:52:36] 2025-11-27 00:51:24,673 | INFO     | PanDA job id: 6895341389
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | task id: 47556137
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | errors: (none)
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | pilot state: finished 
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | transexitcode: 0
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | exeerrorcode: 0
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | exeerrordiag: 
[2025-11-27 01:52:36] 2025-11-27 00:51:24,674 | INFO     | exitcode: 0
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | exitmsg: OK
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | cpuconsumptiontime: 327206 s
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | nevents: 1000
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | neventsw: 0
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | pid: 24385
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | pgrp: 24385
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | corecount: 8
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | event service: False
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | sizes: {0: 2284042, 1: 2284241, 10: 2284503, 12: 2284531, 86125: 2344443, 86130: 2353437, 86131: 2353621, 86229: 2353867}
[2025-11-27 01:52:36] 2025-11-27 00:51:24,675 | INFO     | --------------------------------------------------
[2025-11-27 01:52:36] 2025-11-27 00:51:24,676 | INFO     | 
[2025-11-27 01:52:36] 2025-11-27 00:51:24,676 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-27 01:52:36] 2025-11-27 00:51:24,849 | INFO     | time since job start (86249s) is within the limit (172800.0s)
[2025-11-27 01:52:36] 2025-11-27 00:51:25,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:52:36] 2025-11-27 00:51:25,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:52:36] 2025-11-27 00:51:25,199 | INFO     | job 6895341389 has completed (purged errors)
[2025-11-27 01:52:36] 2025-11-27 00:51:25,199 | INFO     | overall cleanup function is called
[2025-11-27 01:52:36] 2025-11-27 00:51:26,222 | INFO     | --- collectZombieJob: --- 10, [24385]
[2025-11-27 01:52:36] 2025-11-27 00:51:26,222 | INFO     | zombie collector waiting for pid 24385
[2025-11-27 01:52:36] 2025-11-27 00:51:26,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:52:36] 2025-11-27 00:51:26,223 | INFO     | collected zombie processes
[2025-11-27 01:52:36] 2025-11-27 00:51:26,223 | INFO     | will attempt to kill all subprocesses of pid=24385
[2025-11-27 01:52:36] 2025-11-27 00:51:26,356 | INFO     | process IDs to be killed: [24385] (in reverse order)
[2025-11-27 01:52:36] 2025-11-27 00:51:27,159 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:52:36] 2025-11-27 00:51:27,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:52:36] 2025-11-27 00:51:27,163 | INFO     | did not find any defunct processes belonging to 24385
[2025-11-27 01:52:36] 2025-11-27 00:51:27,165 | INFO     | did not find any defunct processes belonging to 24385
[2025-11-27 01:52:36] 2025-11-27 00:51:27,231 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:52:36] 2025-11-27 00:51:27,232 | INFO     | ready for new job
[2025-11-27 01:52:36] 2025-11-27 00:51:27,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:52:36] 2025-11-27 00:51:27,237 | INFO     | ***************************************
[2025-11-27 01:52:36] 2025-11-27 00:51:27,237 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:52:36] 2025-11-27 00:51:27,237 | INFO     | ***************************************
[2025-11-27 01:52:36] 2025-11-27 00:51:27,237 | INFO     | 
[2025-11-27 01:52:36] 2025-11-27 00:51:27,238 | INFO     | pilot is running in a VM
[2025-11-27 01:52:36] 2025-11-27 00:51:27,238 | INFO     | architecture information:
[2025-11-27 01:52:36] 2025-11-27 00:51:27,250 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:52:36] 2025-11-27 00:51:27,425 | INFO     | cat /etc/os-release:
[2025-11-27 01:52:36] NAME="CentOS Linux"
[2025-11-27 01:52:36] VERSION="7 (Core)"
[2025-11-27 01:52:36] ID="centos"
[2025-11-27 01:52:36] ID_LIKE="rhel fedora"
[2025-11-27 01:52:36] VERSION_ID="7"
[2025-11-27 01:52:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:52:36] ANSI_COLOR="0;31"
[2025-11-27 01:52:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:52:36] HOME_URL="https://www.centos.org/"
[2025-11-27 01:52:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:52:36] 
[2025-11-27 01:52:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:52:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:52:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:52:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:52:36] 
[2025-11-27 01:52:36] 2025-11-27 00:51:27,426 | INFO     | ***************************************
[2025-11-27 01:52:36] 2025-11-27 00:51:27,929 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-27 01:52:36] 2025-11-27 00:51:28,039 | INFO     | sufficient remaining disk space (495537094656 B)
[2025-11-27 01:52:36] 2025-11-27 00:51:28,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:52:36] 2025-11-27 00:51:28,040 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:52:36] 2025-11-27 00:51:28,040 | INFO     | update_server=False
[2025-11-27 01:52:36] 2025-11-27 00:51:28,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:52:36] 2025-11-27 00:51:28,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:52:36] 2025-11-27 00:51:28,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:52:36] 2025-11-27 00:51:28,361 | INFO     | aborting loop
[2025-11-27 01:52:36] 2025-11-27 00:51:28,584 | INFO     | all data control threads have been joined
[2025-11-27 01:52:36] 2025-11-27 00:51:29,046 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:29,171 | INFO     | all job control threads have been joined
[2025-11-27 01:52:36] 2025-11-27 00:51:29,214 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:29,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:52:36] 2025-11-27 00:51:29,336 | INFO     | all payload control threads have been joined
[2025-11-27 01:52:36] 2025-11-27 00:51:29,355 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:29,367 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:29,449 | INFO     | [job] validate thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:29,517 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:29,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:52:36] 2025-11-27 00:51:29,590 | INFO     | [data] control thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:29,893 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:30,177 | INFO     | [job] control thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:30,342 | INFO     | [payload] control thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:30,490 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:30,558 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:30,612 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:31,323 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:32,050 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:38,837 | INFO     | job.realtimelogging is not enabled
[2025-11-27 01:52:36] 2025-11-27 00:51:39,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:52:36] 2025-11-27 00:51:57,989 | INFO     | PID=17821 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:52:36] 2025-11-27 00:51:57,989 | INFO     | .. there are 9 such processes running
[2025-11-27 01:52:36] 2025-11-27 00:51:57,990 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:52:36] 2025-11-27 00:51:57,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:52:36] 2025-11-27 00:51:57,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:52:36] 2025-11-27 00:52:25,912 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:52:36] 2025-11-27 00:52:26,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647461304128)>', '<ExcThread(monitor, started 140646866208512)>']
[2025-11-27 01:52:36] 2025-11-27 00:52:27,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:52:36] 2025-11-27 00:52:27,160 | INFO     | [monitor] control thread has ended
[2025-11-27 01:52:36] 2025-11-27 00:52:31,768 | INFO     | all workflow threads have been joined
[2025-11-27 01:52:36] 2025-11-27 00:52:31,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:52:36] 2025-11-27 00:52:31,768 | INFO     | traces error code: 0
[2025-11-27 01:52:36] 2025-11-27 00:52:31,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:52:36] 2025-11-27 00:52:32,079 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:52:36] 2025-11-27 00:52:32,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:52:36] 2025-11-27 00:52:32,252 [wrapper] pilotpid: 17821
[2025-11-27 01:52:36] 2025-11-27 00:52:32,313 [wrapper] Pilot exit status: 0
[2025-11-27 01:52:36] 2025-11-27 00:52:32,713 [wrapper] pandaids: 6895341389
[2025-11-27 01:52:36] 2025-11-27 00:52:33,827 [wrapper] cleanup supervisor_pilot  8054 17822
[2025-11-27 01:52:36] 2025-11-27 00:52:33,941 [wrapper] Test setup, not cleaning
[2025-11-27 01:52:36] 2025-11-27 00:52:33,993 [wrapper] apfmon messages muted
[2025-11-27 01:52:36] 2025-11-27 00:52:34,078 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:52:36] 2025-11-27 00:52:34,164 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:52:36]  *** Error codes and diagnostics ***
[2025-11-27 01:52:36]     "exeErrorCode": 0,
[2025-11-27 01:52:36]     "exeErrorDiag": "",
[2025-11-27 01:52:36]     "pilotErrorCode": 0,
[2025-11-27 01:52:36]     "pilotErrorDiag": "",
[2025-11-27 01:52:36]  *** Listing of results directory ***
[2025-11-27 01:52:36] total 1343452
[2025-11-27 01:52:36] -rwx------. 1 boinc boinc     36292 Nov 22 16:04 runpilot2-wrapper.sh
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc      5112 Nov 22 16:04 queuedata.json
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc    576529 Nov 22 16:04 pilot3.tar.gz
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc       100 Nov 26 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:52:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 01:53 run_atlas
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc       105 Nov 26 01:53 job.xml
[2025-11-27 01:52:36] -rw-r--r--. 2 boinc boinc 408545524 Nov 26 01:53 EVNT.47483658._000400.pool.root.1
[2025-11-27 01:52:36] drwxrwx--x. 2 boinc boinc        68 Nov 26 01:53 shared
[2025-11-27 01:52:36] -rw-r--r--. 2 boinc boinc    590091 Nov 26 01:53 input.tar.gz
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc      6390 Nov 26 01:53 init_data.xml
[2025-11-27 01:52:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:53 start_atlas.sh
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc         0 Nov 26 01:53 boinc_lockfile
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc      2784 Nov 26 01:53 pandaJob.out
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc    991877 Nov 26 01:53 agis_schedconf.cvmfs.json
[2025-11-27 01:52:36] drwx------. 5 boinc boinc      4096 Nov 26 01:53 pilot3
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc       533 Nov 27 01:26 boinc_task_state.xml
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc 935378121 Nov 27 01:48 HITS.47556137._003959.pool.root.1
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc      1032 Nov 27 01:49 memory_monitor_summary.json
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc   1516240 Nov 27 01:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc   2482508 Nov 27 01:49 log.47556137._003959.job.log.tgz.1
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc        95 Nov 27 01:51 pilot_heartbeat.json
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc      7942 Nov 27 01:51 heartbeat.json
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc        29 Nov 27 01:52 wrapper_checkpoint.txt
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc      8192 Nov 27 01:52 boinc_mmap_file
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc      4956 Nov 27 01:52 pilotlog.txt
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc  11451753 Nov 27 01:52 log.47556137._003959.job.log.1
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc       353 Nov 27 01:52 output.list
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc       620 Nov 27 01:52 runtime_log
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc  13957120 Nov 27 01:52 result.tar.gz
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc       662 Nov 27 01:52 rBfKDmyK4g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJDKKDmEOH7ym.diag
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc      8817 Nov 27 01:52 runtime_log.err
[2025-11-27 01:52:36] -rw-r--r--. 1 boinc boinc     21436 Nov 27 01:52 stderr.txt
[2025-11-27 01:52:36] HITS file was successfully produced:
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc 935378121 Nov 27 01:48 shared/HITS.pool.root.1
[2025-11-27 01:52:36]  *** Contents of shared directory: ***
[2025-11-27 01:52:36] total 1326656
[2025-11-27 01:52:36] -rw-r--r--. 2 boinc boinc 408545524 Nov 26 01:53 ATLAS.root_0
[2025-11-27 01:52:36] -rw-r--r--. 2 boinc boinc    590091 Nov 26 01:53 input.tar.gz
[2025-11-27 01:52:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:53 start_atlas.sh
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc 935378121 Nov 27 01:48 HITS.pool.root.1
[2025-11-27 01:52:36] -rw-------. 1 boinc boinc  13957120 Nov 27 01:52 result.tar.gz
01:52:38 (14089): run_atlas exited; CPU time 327790.627087
01:52:38 (14089): called boinc_finish(0)

</stderr_txt>
]]>

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