Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:28:57 (1752732): wrapper (7.7.26015): starting
05:28:57 (1752732): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 05:28:57] Arguments: --nthreads 3
[2025-11-26 05:28:57] Threads: 3
[2025-11-26 05:28:57] Checking for CVMFS
[2025-11-26 05:28:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 05:28:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 05:28:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 05:28:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 05:28:58] 2.9.2.0 2059758 10698 92448 153309 0 81 19092251 36864001 0 130560 1 3966282 99.929 550607 718 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 05:28:58] CVMFS is ok
[2025-11-26 05:28:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:28:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:28:58] Further information can be found at the LHC@home message board.
[2025-11-26 05:28:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:28:58] Checking for apptainer binary...
[2025-11-26 05:28:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 05:28:58] Running /usr/bin/apptainer --version
[2025-11-26 05:28:58] apptainer version 1.4.1-1.1
[2025-11-26 05:28:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:28:58] atlasA303
[2025-11-26 05:28:58] apptainer works
[2025-11-26 05:28:58] Set ATHENA_PROC_NUMBER=3
[2025-11-26 05:28:58] Set ATHENA_CORE_NUMBER=3
[2025-11-26 05:28:58] Starting ATLAS job with PandaID=6895340903
[2025-11-26 05:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:30:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:30:40] ANSI_COLOR="0;31"
[2025-11-26 13:30:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:30:40] HOME_URL="https://www.centos.org/"
[2025-11-26 13:30:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:30:40] 
[2025-11-26 13:30:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:30:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:30:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:30:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:30:40] 
[2025-11-26 13:30:40] 2025-11-26 12:29:35,073 | INFO     | ***************************************
[2025-11-26 13:30:40] 2025-11-26 12:29:35,576 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 13:30:40] 2025-11-26 12:29:35,590 | INFO     | sufficient remaining disk space (383120310272 B)
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | INFO     | update_server=False
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:30:40] 2025-11-26 12:29:35,591 | INFO     | aborting loop
[2025-11-26 13:30:40] 2025-11-26 12:29:35,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:30:40] 2025-11-26 12:29:35,965 | INFO     | all payload control threads have been joined
[2025-11-26 13:30:40] 2025-11-26 12:29:36,181 | INFO     | all job control threads have been joined
[2025-11-26 13:30:40] 2025-11-26 12:29:36,362 | INFO     | all data control threads have been joined
[2025-11-26 13:30:40] 2025-11-26 12:29:36,596 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:36,597 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:36,597 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:36,853 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:36,971 | INFO     | [payload] control thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,022 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,186 | INFO     | [job] control thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,260 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,367 | INFO     | [data] control thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,525 | INFO     | [job] validate thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,526 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,654 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,791 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:37,914 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:29:39,598 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:30:40] 2025-11-26 12:30:05,529 | INFO     | PID=1756451 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 13:30:40] 2025-11-26 12:30:05,529 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:30:40] 2025-11-26 12:30:05,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:30:40] 2025-11-26 12:30:05,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:30:40] 2025-11-26 12:30:35,435 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:30:40] 2025-11-26 12:30:35,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682923550528)>', '<ExcThread(monitor, started 139682570548992)>']
[2025-11-26 13:30:40] 2025-11-26 12:30:35,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:30:40] 2025-11-26 12:30:35,688 | INFO     | [monitor] control thread has ended
[2025-11-26 13:30:40] 2025-11-26 12:30:40,486 | INFO     | all workflow threads have been joined
[2025-11-26 13:30:40] 2025-11-26 12:30:40,486 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:30:40] 2025-11-26 12:30:40,487 | INFO     | traces error code: 0
[2025-11-26 13:30:40] 2025-11-26 12:30:40,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:30:40] 2025-11-26 12:30:40,537 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:30:40] 2025-11-26 12:30:40,539 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:30:40] 2025-11-26 12:30:40,541 [wrapper] pilotpid: 1756451
[2025-11-26 13:30:40] 2025-11-26 12:30:40,543 [wrapper] Pilot exit status: 0
[2025-11-26 13:30:40] 2025-11-26 12:30:40,551 [wrapper] pandaids: 6895340903
[2025-11-26 13:30:40] 2025-11-26 12:30:40,567 [wrapper] cleanup supervisor_pilot 1923248 1756452
[2025-11-26 13:30:40] 2025-11-26 12:30:40,569 [wrapper] Test setup, not cleaning
[2025-11-26 13:30:40] 2025-11-26 12:30:40,572 [wrapper] apfmon messages muted
[2025-11-26 13:30:40] 2025-11-26 12:30:40,574 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:30:40] 2025-11-26 12:30:40,576 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:30:40]  *** Error codes and diagnostics ***
[2025-11-26 13:30:40]     "exeErrorCode": 0,
[2025-11-26 13:30:40]     "exeErrorDiag": "",
[2025-11-26 13:30:40]     "pilotErrorCode": 0,
[2025-11-26 13:30:40]     "pilotErrorDiag": "",
[2025-11-26 13:30:40]  *** Listing of results directory ***
[2025-11-26 13:30:40] total 1311220
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc    576529 Nov 22 15:16 pilot3.tar.gz
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc      5112 Nov 22 15:59 queuedata.json
[2025-11-26 13:30:40] -rwx------ 1 boinc boinc     36292 Nov 22 16:00 runpilot2-wrapper.sh
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc       100 Nov 26 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:30:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 05:28 run_atlas
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc       105 Nov 26 05:28 job.xml
[2025-11-26 13:30:40] -rw-r--r-- 2 boinc boinc 409911689 Nov 26 05:28 EVNT.47483658._001093.pool.root.1
[2025-11-26 13:30:40] drwxrwx--x 2 boinc boinc      4096 Nov 26 05:28 shared
[2025-11-26 13:30:40] -rw-r--r-- 2 boinc boinc    590102 Nov 26 05:28 input.tar.gz
[2025-11-26 13:30:40] -rw-r--r-- 2 boinc boinc     15847 Nov 26 05:28 start_atlas.sh
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc         0 Nov 26 05:28 boinc_setup_complete
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc      6448 Nov 26 05:28 init_data.xml
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc         0 Nov 26 05:28 boinc_lockfile
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc      2783 Nov 26 05:28 pandaJob.out
[2025-11-26 13:30:40] -rw------- 1 boinc boinc    991877 Nov 26 05:29 agis_schedconf.cvmfs.json
[2025-11-26 13:30:40] drwx------ 5 boinc boinc      4096 Nov 26 05:29 pilot3
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc       531 Nov 26 13:25 boinc_task_state.xml
[2025-11-26 13:30:40] -rw------- 1 boinc boinc 918438749 Nov 26 13:29 HITS.47556149._000800.pool.root.1
[2025-11-26 13:30:40] -rw------- 1 boinc boinc      1022 Nov 26 13:29 memory_monitor_summary.json
[2025-11-26 13:30:40] -rw------- 1 boinc boinc   1516240 Nov 26 13:29 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:30:40] -rw------- 1 boinc boinc   1157767 Nov 26 13:29 log.47556149._000800.job.log.tgz.1
[2025-11-26 13:30:40] -rw------- 1 boinc boinc        95 Nov 26 13:29 pilot_heartbeat.json
[2025-11-26 13:30:40] -rw------- 1 boinc boinc      8560 Nov 26 13:29 heartbeat.json
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc      8192 Nov 26 13:30 boinc_mmap_file
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc        28 Nov 26 13:30 wrapper_checkpoint.txt
[2025-11-26 13:30:40] -rw------- 1 boinc boinc      4752 Nov 26 13:30 pilotlog.txt
[2025-11-26 13:30:40] -rw------- 1 boinc boinc   4057592 Nov 26 13:30 log.47556149._000800.job.log.1
[2025-11-26 13:30:40] -rw------- 1 boinc boinc       353 Nov 26 13:30 output.list
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc       620 Nov 26 13:30 runtime_log
[2025-11-26 13:30:40] -rw------- 1 boinc boinc   5232640 Nov 26 13:30 result.tar.gz
[2025-11-26 13:30:40] -rw------- 1 boinc boinc       668 Nov 26 13:30 trmKDmyG4g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm38HKDmsBg95m.diag
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc      8913 Nov 26 13:30 runtime_log.err
[2025-11-26 13:30:40] -rw-r--r-- 1 boinc boinc      8454 Nov 26 13:30 stderr.txt
[2025-11-26 13:30:40] HITS file was successfully produced:
[2025-11-26 13:30:40] -rw------- 1 boinc boinc 918438749 Nov 26 13:29 shared/HITS.pool.root.1
[2025-11-26 13:30:40]  *** Contents of shared directory: ***
[2025-11-26 13:30:40] total 1302940
[2025-11-26 13:30:40] -rw-r--r-- 2 boinc boinc 409911689 Nov 26 05:28 ATLAS.root_0
[2025-11-26 13:30:40] -rw-r--r-- 2 boinc boinc    590102 Nov 26 05:28 input.tar.gz
[2025-11-26 13:30:40] -rw-r--r-- 2 boinc boinc     15847 Nov 26 05:28 start_atlas.sh
[2025-11-26 13:30:40] -rw------- 1 boinc boinc 918438749 Nov 26 13:29 HITS.pool.root.1
[2025-11-26 13:30:40] -rw------- 1 boinc boinc   5232640 Nov 26 13:30 result.tar.gz
13:30:41 (1752732): run_atlas exited; CPU time 85099.774062
13:30:41 (1752732): called boinc_finish(0)

</stderr_txt>
]]>

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