Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:39 (6028): wrapper (7.7.26015): starting
04:40:39 (6028): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:40:39] Arguments: --nthreads 8
[2025-11-26 04:40:39] Threads: 8
[2025-11-26 04:40:39] Checking for CVMFS
[2025-11-26 04:40:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:40:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:40:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:40:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:40:42] 2.11.2.0 1038 171648 134724 153307 2 85 20450667 25165824 1288 130560 10 56504451 99.890 27776987 2315 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 04:40:42] CVMFS is ok
[2025-11-26 04:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:40:42] Checking for apptainer binary...
[2025-11-26 04:40:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:40:42] Running /usr/bin/apptainer --version
[2025-11-26 04:40:42] apptainer version 1.3.2-1.el7
[2025-11-26 04:40:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:40:55] cg-vwn304.simple-grid.lan
[2025-11-26 04:40:55] apptainer works
[2025-11-26 04:40:56] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:40:56] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:40:56] Starting ATLAS job with PandaID=6895351847
[2025-11-26 04:40:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:39:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:39:34] 2025-11-27 03:38:07,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:39:34] 2025-11-27 03:38:08,221 | INFO     | time since job start (85995s) is within the limit (172800.0s)
[2025-11-27 04:39:34] 2025-11-27 03:38:09,717 | INFO     | monitor loop #5781: job 0:6895351847 is in state 'finished'
[2025-11-27 04:39:34] 2025-11-27 03:38:09,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:39:34] 2025-11-27 03:38:10,231 | INFO     | time since job start (85997s) is within the limit (172800.0s)
[2025-11-27 04:39:34] 2025-11-27 03:38:12,225 | INFO     | monitor loop #5782: job 0:6895351847 is in state 'finished'
[2025-11-27 04:39:34] 2025-11-27 03:38:12,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:39:34] 2025-11-27 03:38:12,238 | INFO     | time since job start (85999s) is within the limit (172800.0s)
[2025-11-27 04:39:34] 2025-11-27 03:38:14,245 | INFO     | time since job start (86001s) is within the limit (172800.0s)
[2025-11-27 04:39:34] 2025-11-27 03:38:14,729 | INFO     | monitor loop #5783: job 0:6895351847 is in state 'finished'
[2025-11-27 04:39:34] 2025-11-27 03:38:14,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:39:34] 2025-11-27 03:38:16,252 | INFO     | time since job start (86003s) is within the limit (172800.0s)
[2025-11-27 04:39:34] 2025-11-27 03:38:17,236 | INFO     | monitor loop #5784: job 0:6895351847 is in state 'finished'
[2025-11-27 04:39:34] 2025-11-27 03:38:17,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:39:34] 2025-11-27 03:38:18,265 | INFO     | time since job start (86005s) is within the limit (172800.0s)
[2025-11-27 04:39:34] 2025-11-27 03:38:18,784 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 04:39:34] 2025-11-27 03:38:18,787 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-27 04:39:34] 2025-11-27 03:38:18,789 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895351847/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:39:34] 2025-11-27 03:38:18,790 | INFO     | extracted standard info from prmon json
[2025-11-27 04:39:34] 2025-11-27 03:38:18,790 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:39:34] 2025-11-27 03:38:18,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:39:34] 2025-11-27 03:38:18,828 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:39:34] 2025-11-27 03:38:18,831 | INFO     | sum of square deviations: 850867664809.1749
[2025-11-27 04:39:34] 2025-11-27 03:38:18,922 | INFO     | sum of deviations: 3527893719821.056
[2025-11-27 04:39:34] 2025-11-27 03:38:18,922 | INFO     | mean x: 1764171895.5957143
[2025-11-27 04:39:34] 2025-11-27 03:38:18,922 | INFO     | mean y: 2839432.842857143
[2025-11-27 04:39:34] 2025-11-27 03:38:18,922 | INFO     | intersect: -7311824419.7936735
[2025-11-27 04:39:34] 2025-11-27 03:38:18,924 | INFO     | chi2: 24.05633028907491
[2025-11-27 04:39:34] 2025-11-27 03:38:18,926 | INFO     | sum of square deviations: 841784204213.1497
[2025-11-27 04:39:34] 2025-11-27 03:38:19,011 | INFO     | sum of deviations: 3992364648894.2495
[2025-11-27 04:39:34] 2025-11-27 03:38:19,012 | INFO     | mean x: 1764171743.0996416
[2025-11-27 04:39:34] 2025-11-27 03:38:19,012 | INFO     | mean y: 2847229.875985663
[2025-11-27 04:39:34] 2025-11-27 03:38:19,012 | INFO     | intersect: -8364162826.237791
[2025-11-27 04:39:34] 2025-11-27 03:38:19,020 | INFO     | chi2: 20.826851071957073
[2025-11-27 04:39:34] 2025-11-27 03:38:19,020 | INFO     | current chi2=20.826851071957073 (change=13.424654460221197 %)
[2025-11-27 04:39:34] 2025-11-27 03:38:19,020 | INFO     | right removable region: 1394
[2025-11-27 04:39:34] 2025-11-27 03:38:19,022 | INFO     | sum of square deviations: 841783268473.1499
[2025-11-27 04:39:34] 2025-11-27 03:38:19,090 | INFO     | sum of deviations: 2941338480493.9355
[2025-11-27 04:39:34] 2025-11-27 03:38:19,090 | INFO     | mean x: 1764172048.0996416
[2025-11-27 04:39:34] 2025-11-27 03:38:19,090 | INFO     | mean y: 2849279.058064516
[2025-11-27 04:39:34] 2025-11-27 03:38:19,091 | INFO     | intersect: -6161477484.8835335
[2025-11-27 04:39:34] 2025-11-27 03:38:19,092 | INFO     | chi2: 19.32786052739938
[2025-11-27 04:39:34] 2025-11-27 03:38:19,093 | INFO     | current chi2=19.32786052739938 (change=19.655823248415185 %)
[2025-11-27 04:39:34] 2025-11-27 03:38:19,093 | INFO     | left removable region: 10
[2025-11-27 04:39:34] 2025-11-27 03:38:19,095 | INFO     | sum of square deviations: 822026786953.7434
[2025-11-27 04:39:34] 2025-11-27 03:38:19,151 | INFO     | sum of deviations: 3001360425325.7817
[2025-11-27 04:39:34] 2025-11-27 03:38:19,152 | INFO     | mean x: 1764172017.6083815
[2025-11-27 04:39:34] 2025-11-27 03:38:19,152 | INFO     | mean y: 2867466.294797688
[2025-11-27 04:39:34] 2025-11-27 03:38:19,152 | INFO     | intersect: -6438426371.268292
[2025-11-27 04:39:34] 2025-11-27 03:38:19,154 | INFO     | chi2: 11.897696391054648
[2025-11-27 04:39:34] 2025-11-27 03:38:19,154 | INFO     | current memory leak: 3.65 B/s (using 1384 data points, chi2=11.90)
[2025-11-27 04:39:34] 2025-11-27 03:38:19,156 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 04:39:34] 2025-11-27 03:38:19,156 | INFO     | ..............................
[2025-11-27 04:39:34] 2025-11-27 03:38:19,156 | INFO     | . Timing measurements:
[2025-11-27 04:39:34] 2025-11-27 03:38:19,156 | INFO     | . get job = 0 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,156 | INFO     | . initial setup = 9 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,156 | INFO     | . payload setup = 170 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,156 | INFO     | . stage-in = 0 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,157 | INFO     | . payload execution = 85535 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,157 | INFO     | . stage-out = 6 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,157 | INFO     | . log creation = 2 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,157 | INFO     | ..............................
[2025-11-27 04:39:34] 2025-11-27 03:38:19,789 | INFO     | 
[2025-11-27 04:39:34] 2025-11-27 03:38:19,789 | INFO     | job summary report
[2025-11-27 04:39:34] 2025-11-27 03:38:19,789 | INFO     | --------------------------------------------------
[2025-11-27 04:39:34] 2025-11-27 03:38:19,789 | INFO     | PanDA job id: 6895351847
[2025-11-27 04:39:34] 2025-11-27 03:38:19,789 | INFO     | task id: 47556137
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | errors: (none)
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | pilot state: finished 
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | transexitcode: 0
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | exeerrorcode: 0
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | exeerrordiag: 
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | exitcode: 0
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | exitmsg: OK
[2025-11-27 04:39:34] 2025-11-27 03:38:19,790 | INFO     | cpuconsumptiontime: 321875 s
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | nevents: 1000
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | neventsw: 0
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | pid: 16393
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | pgrp: 16393
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | corecount: 8
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | event service: False
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | sizes: {0: 2284037, 1: 2284292, 2: 2284292, 12: 2284320, 23: 2284348, 34: 2284376, 44: 2284532, 55: 2284560, 66: 2284588, 77: 2284616, 87: 2284672, 90: 2285242, 98
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | --------------------------------------------------
[2025-11-27 04:39:34] 2025-11-27 03:38:19,791 | INFO     | 
[2025-11-27 04:39:34] 2025-11-27 03:38:19,792 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-27 04:39:34] 2025-11-27 03:38:20,287 | INFO     | time since job start (86007s) is within the limit (172800.0s)
[2025-11-27 04:39:34] 2025-11-27 03:38:20,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:39:34] 2025-11-27 03:38:20,299 | INFO     | job 6895351847 has completed (purged errors)
[2025-11-27 04:39:34] 2025-11-27 03:38:20,299 | INFO     | overall cleanup function is called
[2025-11-27 04:39:34] 2025-11-27 03:38:21,316 | INFO     | --- collectZombieJob: --- 10, [16393]
[2025-11-27 04:39:34] 2025-11-27 03:38:21,316 | INFO     | zombie collector waiting for pid 16393
[2025-11-27 04:39:34] 2025-11-27 03:38:21,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:39:34] 2025-11-27 03:38:21,316 | INFO     | collected zombie processes
[2025-11-27 04:39:34] 2025-11-27 03:38:21,316 | INFO     | will attempt to kill all subprocesses of pid=16393
[2025-11-27 04:39:34] 2025-11-27 03:38:21,448 | INFO     | process IDs to be killed: [16393] (in reverse order)
[2025-11-27 04:39:34] 2025-11-27 03:38:22,432 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:39:34] 2025-11-27 03:38:22,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:39:34] 2025-11-27 03:38:22,435 | INFO     | did not find any defunct processes belonging to 16393
[2025-11-27 04:39:34] 2025-11-27 03:38:22,438 | INFO     | did not find any defunct processes belonging to 16393
[2025-11-27 04:39:34] 2025-11-27 03:38:22,492 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:39:34] 2025-11-27 03:38:22,492 | INFO     | ready for new job
[2025-11-27 04:39:34] 2025-11-27 03:38:22,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:39:34] 2025-11-27 03:38:22,498 | INFO     | ***************************************
[2025-11-27 04:39:34] 2025-11-27 03:38:22,498 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:39:34] 2025-11-27 03:38:22,498 | INFO     | ***************************************
[2025-11-27 04:39:34] 2025-11-27 03:38:22,498 | INFO     | 
[2025-11-27 04:39:34] 2025-11-27 03:38:22,499 | INFO     | pilot is running in a VM
[2025-11-27 04:39:34] 2025-11-27 03:38:22,499 | INFO     | architecture information:
[2025-11-27 04:39:34] 2025-11-27 03:38:22,507 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:39:34] 2025-11-27 03:38:22,790 | INFO     | cat /etc/os-release:
[2025-11-27 04:39:34] NAME="CentOS Linux"
[2025-11-27 04:39:34] VERSION="7 (Core)"
[2025-11-27 04:39:34] ID="centos"
[2025-11-27 04:39:34] ID_LIKE="rhel fedora"
[2025-11-27 04:39:34] VERSION_ID="7"
[2025-11-27 04:39:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:39:34] ANSI_COLOR="0;31"
[2025-11-27 04:39:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:39:34] HOME_URL="https://www.centos.org/"
[2025-11-27 04:39:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:39:34] 
[2025-11-27 04:39:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:39:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:39:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:39:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:39:34] 
[2025-11-27 04:39:34] 2025-11-27 03:38:22,791 | INFO     | ***************************************
[2025-11-27 04:39:34] 2025-11-27 03:38:23,294 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-27 04:39:34] 2025-11-27 03:38:23,594 | INFO     | sufficient remaining disk space (495374565376 B)
[2025-11-27 04:39:34] 2025-11-27 03:38:23,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:39:34] 2025-11-27 03:38:23,595 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:39:34] 2025-11-27 03:38:23,595 | INFO     | update_server=False
[2025-11-27 04:39:34] 2025-11-27 03:38:23,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:39:34] 2025-11-27 03:38:23,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:39:34] 2025-11-27 03:38:23,596 | INFO     | aborting loop
[2025-11-27 04:39:34] 2025-11-27 03:38:23,667 | INFO     | all data control threads have been joined
[2025-11-27 04:39:34] 2025-11-27 03:38:23,805 | INFO     | all payload control threads have been joined
[2025-11-27 04:39:34] 2025-11-27 03:38:23,970 | INFO     | all job control threads have been joined
[2025-11-27 04:39:34] 2025-11-27 03:38:24,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:39:34] 2025-11-27 03:38:24,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:39:34] 2025-11-27 03:38:24,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:39:34] 2025-11-27 03:38:24,601 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:24,602 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:24,673 | INFO     | [data] control thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:24,811 | INFO     | [payload] control thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:24,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:24,918 | INFO     | [job] validate thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:24,976 | INFO     | [job] control thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:25,063 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:25,110 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:25,254 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:25,324 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:25,361 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:25,535 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:25,936 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:26,301 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:28,280 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:39:34] 2025-11-27 03:38:53,457 | INFO     | PID=9832 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 04:39:34] 2025-11-27 03:38:53,457 | INFO     | .. there are 9 such processes running
[2025-11-27 04:39:34] 2025-11-27 03:38:53,458 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:39:34] 2025-11-27 03:38:53,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:39:34] 2025-11-27 03:38:53,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:39:34] 2025-11-27 03:39:23,155 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:39:34] 2025-11-27 03:39:24,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113065420608)>', '<ExcThread(monitor, started 140112478324480)>']
[2025-11-27 04:39:34] 2025-11-27 03:39:24,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:39:34] 2025-11-27 03:39:24,645 | INFO     | [monitor] control thread has ended
[2025-11-27 04:39:34] 2025-11-27 03:39:29,218 | INFO     | all workflow threads have been joined
[2025-11-27 04:39:34] 2025-11-27 03:39:29,218 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:39:34] 2025-11-27 03:39:29,218 | INFO     | traces error code: 0
[2025-11-27 04:39:34] 2025-11-27 03:39:29,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:39:34] 2025-11-27 03:39:29,488 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:39:34] 2025-11-27 03:39:29,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:39:34] 2025-11-27 03:39:29,609 [wrapper] pilotpid: 9832
[2025-11-27 04:39:34] 2025-11-27 03:39:29,693 [wrapper] Pilot exit status: 0
[2025-11-27 04:39:34] 2025-11-27 03:39:30,033 [wrapper] pandaids: 6895351847
[2025-11-27 04:39:34] 2025-11-27 03:39:31,056 [wrapper] cleanup supervisor_pilot  4603 9833
[2025-11-27 04:39:34] 2025-11-27 03:39:31,136 [wrapper] Test setup, not cleaning
[2025-11-27 04:39:34] 2025-11-27 03:39:31,186 [wrapper] apfmon messages muted
[2025-11-27 04:39:34] 2025-11-27 03:39:31,250 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:39:34] 2025-11-27 03:39:31,347 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:39:34]  *** Error codes and diagnostics ***
[2025-11-27 04:39:34]     "exeErrorCode": 0,
[2025-11-27 04:39:34]     "exeErrorDiag": "",
[2025-11-27 04:39:34]     "pilotErrorCode": 0,
[2025-11-27 04:39:34]     "pilotErrorDiag": "",
[2025-11-27 04:39:34]  *** Listing of results directory ***
[2025-11-27 04:39:34] total 1338980
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc    576529 Nov 23 02:20 pilot3.tar.gz
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc      5112 Nov 23 02:22 queuedata.json
[2025-11-27 04:39:34] -rwx------. 1 boinc boinc     36292 Nov 23 02:22 runpilot2-wrapper.sh
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc       100 Nov 26 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:39:34] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 04:40 run_atlas
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc       105 Nov 26 04:40 job.xml
[2025-11-27 04:39:34] -rw-r--r--. 2 boinc boinc 410433052 Nov 26 04:40 EVNT.47483658._000570.pool.root.1
[2025-11-27 04:39:34] drwxrwx--x. 2 boinc boinc        68 Nov 26 04:40 shared
[2025-11-27 04:39:34] -rw-r--r--. 2 boinc boinc    590104 Nov 26 04:40 input.tar.gz
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc      6391 Nov 26 04:40 init_data.xml
[2025-11-27 04:39:34] -rw-r--r--. 2 boinc boinc     15847 Nov 26 04:40 start_atlas.sh
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc         0 Nov 26 04:40 boinc_lockfile
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc      2785 Nov 26 04:40 pandaJob.out
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc    991877 Nov 26 04:44 agis_schedconf.cvmfs.json
[2025-11-27 04:39:34] drwx------. 5 boinc boinc      4096 Nov 26 04:44 pilot3
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc       533 Nov 27 04:16 boinc_task_state.xml
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc 928847147 Nov 27 04:35 HITS.47556137._005654.pool.root.1
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc      1029 Nov 27 04:36 memory_monitor_summary.json
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc   1516240 Nov 27 04:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc   2485365 Nov 27 04:36 log.47556137._005654.job.log.tgz.1
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc      7956 Nov 27 04:38 heartbeat.json
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc        95 Nov 27 04:38 pilot_heartbeat.json
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc      8192 Nov 27 04:39 boinc_mmap_file
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc        29 Nov 27 04:39 wrapper_checkpoint.txt
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc      4883 Nov 27 04:39 pilotlog.txt
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc  11480750 Nov 27 04:39 log.47556137._005654.job.log.1
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc       353 Nov 27 04:39 output.list
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc       620 Nov 27 04:39 runtime_log
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc  13987840 Nov 27 04:39 result.tar.gz
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc      8817 Nov 27 04:39 runtime_log.err
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc       662 Nov 27 04:39 QmXLDmZzDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbWKKDmiJmjnm.diag
[2025-11-27 04:39:34] -rw-r--r--. 1 boinc boinc     21450 Nov 27 04:39 stderr.txt
[2025-11-27 04:39:34] HITS file was successfully produced:
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc 928847147 Nov 27 04:35 shared/HITS.pool.root.1
[2025-11-27 04:39:34]  *** Contents of shared directory: ***
[2025-11-27 04:39:34] total 1322152
[2025-11-27 04:39:34] -rw-r--r--. 2 boinc boinc 410433052 Nov 26 04:40 ATLAS.root_0
[2025-11-27 04:39:34] -rw-r--r--. 2 boinc boinc    590104 Nov 26 04:40 input.tar.gz
[2025-11-27 04:39:34] -rw-r--r--. 2 boinc boinc     15847 Nov 26 04:40 start_atlas.sh
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc 928847147 Nov 27 04:35 HITS.pool.root.1
[2025-11-27 04:39:34] -rw-------. 1 boinc boinc  13987840 Nov 27 04:39 result.tar.gz
04:39:35 (6028): run_atlas exited; CPU time 322482.836305
04:39:35 (6028): called boinc_finish(0)

</stderr_txt>
]]>

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