Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:24:43 (1576774): wrapper (7.7.26015): starting
21:24:43 (1576774): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 21:24:43] Arguments: --nthreads 3
[2025-11-25 21:24:43] Threads: 3
[2025-11-25 21:24:43] Checking for CVMFS
[2025-11-25 21:24:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:24:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:24:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:24:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:24:43] 2.9.2.0 2059758 10214 91260 153296 3 81 18969230 36864000 0 130560 1 3789481 99.927 530626 695 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 21:24:43] CVMFS is ok
[2025-11-25 21:24:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:24:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:24:43] Further information can be found at the LHC@home message board.
[2025-11-25 21:24:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:24:43] Checking for apptainer binary...
[2025-11-25 21:24:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:24:43] Running /usr/bin/apptainer --version
[2025-11-25 21:24:43] apptainer version 1.4.1-1.1
[2025-11-25 21:24:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:24:43] atlasA303
[2025-11-25 21:24:43] apptainer works
[2025-11-25 21:24:43] Set ATHENA_PROC_NUMBER=3
[2025-11-25 21:24:43] Set ATHENA_CORE_NUMBER=3
[2025-11-25 21:24:43] Starting ATLAS job with PandaID=6895342745
[2025-11-25 21:24:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:28:52]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:28:52] 
[2025-11-26 05:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:28:52] 
[2025-11-26 05:28:52] 2025-11-26 04:28:21,057 | INFO     | ***************************************
[2025-11-26 05:28:52] 2025-11-26 04:28:21,560 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 05:28:52] 2025-11-26 04:28:21,572 | INFO     | sufficient remaining disk space (383205244928 B)
[2025-11-26 05:28:52] 2025-11-26 04:28:21,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:28:52] 2025-11-26 04:28:21,572 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:28:52] 2025-11-26 04:28:21,572 | INFO     | update_server=False
[2025-11-26 05:28:52] 2025-11-26 04:28:21,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:28:52] 2025-11-26 04:28:21,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:28:52] 2025-11-26 04:28:21,864 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 05:28:52] 2025-11-26 04:28:21,864 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 05:28:52] 2025-11-26 04:28:21,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:28:52] 2025-11-26 04:28:21,864 | INFO     | will abort loop
[2025-11-26 05:28:52] 2025-11-26 04:28:21,986 | INFO     | all data control threads have been joined
[2025-11-26 05:28:52] 2025-11-26 04:28:22,287 | INFO     | all payload control threads have been joined
[2025-11-26 05:28:52] 2025-11-26 04:28:22,578 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:22,578 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:22,793 | INFO     | all job control threads have been joined
[2025-11-26 05:28:52] 2025-11-26 04:28:22,832 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:22,870 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:22,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:28:52] 2025-11-26 04:28:22,973 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:22,991 | INFO     | [data] control thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:23,293 | INFO     | [payload] control thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:23,515 | INFO     | [job] validate thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:23,529 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:23,559 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:23,665 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:23,798 | INFO     | [job] control thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:23,968 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:24,206 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:28:52] 2025-11-26 04:28:24,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:28:52] 2025-11-26 04:28:24,942 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:28,868 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:31,681 | INFO     | job.realtimelogging is not enabled
[2025-11-26 05:28:52] 2025-11-26 04:28:32,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:28:52] 2025-11-26 04:28:34,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176756332352)>', '<ExcThread(monitor, started 140176474998528)>']
[2025-11-26 05:28:52] 2025-11-26 04:28:39,699 | INFO     | all workflow threads have been joined
[2025-11-26 05:28:52] 2025-11-26 04:28:39,699 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:28:52] 2025-11-26 04:28:39,699 | INFO     | traces error code: 0
[2025-11-26 05:28:52] 2025-11-26 04:28:39,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:28:52] 2025-11-26 04:28:52,363 | INFO     | PID=1580515 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 05:28:52] 2025-11-26 04:28:52,364 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:28:52] 2025-11-26 04:28:52,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:28:52] 2025-11-26 04:28:52,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:28:52] 2025-11-26 04:28:52,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:28:52] 2025-11-26 04:28:52,364 | INFO     | [monitor] control thread has ended
[2025-11-26 05:28:52] 2025-11-26 04:28:52,412 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:28:52] 2025-11-26 04:28:52,414 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:28:52] 2025-11-26 04:28:52,417 [wrapper] pilotpid: 1580515
[2025-11-26 05:28:52] 2025-11-26 04:28:52,419 [wrapper] Pilot exit status: 0
[2025-11-26 05:28:52] 2025-11-26 04:28:52,426 [wrapper] pandaids: 6895342745
[2025-11-26 05:28:52] 2025-11-26 04:28:52,442 [wrapper] cleanup supervisor_pilot 1749137 1580516
[2025-11-26 05:28:52] 2025-11-26 04:28:52,444 [wrapper] Test setup, not cleaning
[2025-11-26 05:28:52] 2025-11-26 04:28:52,446 [wrapper] apfmon messages muted
[2025-11-26 05:28:52] 2025-11-26 04:28:52,449 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:28:52] 2025-11-26 04:28:52,451 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:28:52]  *** Error codes and diagnostics ***
[2025-11-26 05:28:52]     "exeErrorCode": 0,
[2025-11-26 05:28:52]     "exeErrorDiag": "",
[2025-11-26 05:28:52]     "pilotErrorCode": 0,
[2025-11-26 05:28:52]     "pilotErrorDiag": "",
[2025-11-26 05:28:52]  *** Listing of results directory ***
[2025-11-26 05:28:52] total 1316760
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc    576529 Nov 22 16:04 pilot3.tar.gz
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc      5112 Nov 22 16:21 queuedata.json
[2025-11-26 05:28:52] -rwx------ 1 boinc boinc     36292 Nov 22 16:22 runpilot2-wrapper.sh
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc       100 Nov 25 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:28:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 21:24 run_atlas
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc       105 Nov 25 21:24 job.xml
[2025-11-26 05:28:52] -rw-r--r-- 2 boinc boinc 410005521 Nov 25 21:24 EVNT.47483658._000409.pool.root.1
[2025-11-26 05:28:52] drwxrwx--x 2 boinc boinc      4096 Nov 25 21:24 shared
[2025-11-26 05:28:52] -rw-r--r-- 2 boinc boinc    590104 Nov 25 21:24 input.tar.gz
[2025-11-26 05:28:52] -rw-r--r-- 2 boinc boinc     15847 Nov 25 21:24 start_atlas.sh
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc         0 Nov 25 21:24 boinc_setup_complete
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc      6448 Nov 25 21:24 init_data.xml
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc         0 Nov 25 21:24 boinc_lockfile
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc      2781 Nov 25 21:24 pandaJob.out
[2025-11-26 05:28:52] -rw------- 1 boinc boinc    991893 Nov 25 21:24 agis_schedconf.cvmfs.json
[2025-11-26 05:28:52] drwx------ 5 boinc boinc      4096 Nov 25 21:24 pilot3
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc       531 Nov 26 05:24 boinc_task_state.xml
[2025-11-26 05:28:52] -rw------- 1 boinc boinc 923965715 Nov 26 05:27 HITS.47556137._004041.pool.root.1
[2025-11-26 05:28:52] -rw------- 1 boinc boinc      1021 Nov 26 05:28 memory_monitor_summary.json
[2025-11-26 05:28:52] -rw------- 1 boinc boinc   1516240 Nov 26 05:28 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:28:52] -rw------- 1 boinc boinc   1161540 Nov 26 05:28 log.47556137._004041.job.log.tgz.1
[2025-11-26 05:28:52] -rw------- 1 boinc boinc        95 Nov 26 05:28 pilot_heartbeat.json
[2025-11-26 05:28:52] -rw------- 1 boinc boinc      8558 Nov 26 05:28 heartbeat.json
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc        28 Nov 26 05:28 wrapper_checkpoint.txt
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc      8192 Nov 26 05:28 boinc_mmap_file
[2025-11-26 05:28:52] -rw------- 1 boinc boinc       747 Nov 26 05:28 pilotlog.txt
[2025-11-26 05:28:52] -rw------- 1 boinc boinc   4082476 Nov 26 05:28 log.47556137._004041.job.log.1
[2025-11-26 05:28:52] -rw------- 1 boinc boinc       353 Nov 26 05:28 output.list
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc       620 Nov 26 05:28 runtime_log
[2025-11-26 05:28:52] -rw------- 1 boinc boinc   5263360 Nov 26 05:28 result.tar.gz
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc      8913 Nov 26 05:28 runtime_log.err
[2025-11-26 05:28:52] -rw------- 1 boinc boinc       668 Nov 26 05:28 ZIHMDm0c4g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm09HKDm7fIF3n.diag
[2025-11-26 05:28:52] -rw-r--r-- 1 boinc boinc      8561 Nov 26 05:28 stderr.txt
[2025-11-26 05:28:52] HITS file was successfully produced:
[2025-11-26 05:28:52] -rw------- 1 boinc boinc 923965715 Nov 26 05:27 shared/HITS.pool.root.1
[2025-11-26 05:28:52]  *** Contents of shared directory: ***
[2025-11-26 05:28:52] total 1308456
[2025-11-26 05:28:52] -rw-r--r-- 2 boinc boinc 410005521 Nov 25 21:24 ATLAS.root_0
[2025-11-26 05:28:52] -rw-r--r-- 2 boinc boinc    590104 Nov 25 21:24 input.tar.gz
[2025-11-26 05:28:52] -rw-r--r-- 2 boinc boinc     15847 Nov 25 21:24 start_atlas.sh
[2025-11-26 05:28:52] -rw------- 1 boinc boinc 923965715 Nov 26 05:27 HITS.pool.root.1
[2025-11-26 05:28:52] -rw------- 1 boinc boinc   5263360 Nov 26 05:28 result.tar.gz
05:28:54 (1576774): run_atlas exited; CPU time 85615.265799
05:28:54 (1576774): called boinc_finish(0)

</stderr_txt>
]]>

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