Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:08:01 (14696): wrapper (7.7.26015): starting
07:08:01 (14696): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 07:08:01] Arguments: --nthreads 12
[2025-11-23 07:08:01] Threads: 12
[2025-11-23 07:08:01] Checking for CVMFS
[2025-11-23 07:08:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 07:08:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 07:08:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 07:08:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 07:08:02] 2.11.2.0 2998 283295 94652 153208 3 9 12532893 20275201 1 130560 1 127673458 99.967 16752346 14436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 07:08:02] CVMFS is ok
[2025-11-23 07:08:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:08:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:08:02] Further information can be found at the LHC@home message board.
[2025-11-23 07:08:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:08:02] Checking for apptainer binary...
[2025-11-23 07:08:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 07:08:02] Running /usr/bin/apptainer --version
[2025-11-23 07:08:02] apptainer version 1.3.2-1.el7
[2025-11-23 07:08:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:08:03] c-205-25.aglt2.org
[2025-11-23 07:08:03] apptainer works
[2025-11-23 07:08:03] Set ATHENA_PROC_NUMBER=12
[2025-11-23 07:08:03] Set ATHENA_CORE_NUMBER=12
[2025-11-23 07:08:03] Starting ATLAS job with PandaID=6895327966
[2025-11-23 07:08:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 14:07:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 14:07:05] 2025-11-23 19:06:23,380 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 14:07:05] 2025-11-23 19:06:23,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 14:07:05] 2025-11-23 19:06:23,387 | INFO     | fitting pss+swap vs Time
[2025-11-23 14:07:05] 2025-11-23 19:06:23,387 | INFO     | sum of square deviations: 21527960982.85163
[2025-11-23 14:07:05] 2025-11-23 19:06:23,391 | INFO     | sum of deviations: 320280012785.48694
[2025-11-23 14:07:05] 2025-11-23 19:06:23,391 | INFO     | mean x: 1763912232.2214112
[2025-11-23 14:07:05] 2025-11-23 19:06:23,391 | INFO     | mean y: 3404681.126520681
[2025-11-23 14:07:05] 2025-11-23 19:06:23,391 | INFO     | intersect: -26239017104.121284
[2025-11-23 14:07:05] 2025-11-23 19:06:23,392 | INFO     | chi2: 6.994217667371999
[2025-11-23 14:07:05] 2025-11-23 19:06:23,392 | INFO     | sum of square deviations: 20751816045.103382
[2025-11-23 14:07:05] 2025-11-23 19:06:23,396 | INFO     | sum of deviations: 486321573286.8273
[2025-11-23 14:07:05] 2025-11-23 19:06:23,396 | INFO     | mean x: 1763912079.724138
[2025-11-23 14:07:05] 2025-11-23 19:06:23,396 | INFO     | mean y: 3437293.9359605913
[2025-11-23 14:07:05] 2025-11-23 19:06:23,396 | INFO     | intersect: -41334077258.36253
[2025-11-23 14:07:05] 2025-11-23 19:06:23,397 | INFO     | chi2: 3.574088975220903
[2025-11-23 14:07:05] 2025-11-23 19:06:23,397 | INFO     | current chi2=3.574088975220903 (change=48.89937452341503 %)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,397 | INFO     | sum of square deviations: 19994555182.349182
[2025-11-23 14:07:05] 2025-11-23 19:06:23,401 | INFO     | sum of deviations: 564753919340.7955
[2025-11-23 14:07:05] 2025-11-23 19:06:23,401 | INFO     | mean x: 1763911927.2269328
[2025-11-23 14:07:05] 2025-11-23 19:06:23,401 | INFO     | mean y: 3453052.1670822944
[2025-11-23 14:07:05] 2025-11-23 19:06:23,401 | INFO     | intersect: -49818919348.13477
[2025-11-23 14:07:05] 2025-11-23 19:06:23,402 | INFO     | chi2: 2.6186450237975953
[2025-11-23 14:07:05] 2025-11-23 19:06:23,402 | INFO     | current chi2=2.6186450237975953 (change=26.732517238585384 %)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,402 | INFO     | sum of square deviations: 19255872813.44432
[2025-11-23 14:07:05] 2025-11-23 19:06:23,406 | INFO     | sum of deviations: 553584536171.055
[2025-11-23 14:07:05] 2025-11-23 19:06:23,406 | INFO     | mean x: 1763911774.7222223
[2025-11-23 14:07:05] 2025-11-23 19:06:23,406 | INFO     | mean y: 3450741.845959596
[2025-11-23 14:07:05] 2025-11-23 19:06:23,406 | INFO     | intersect: -50707015156.87436
[2025-11-23 14:07:05] 2025-11-23 19:06:23,407 | INFO     | chi2: 2.6113088778189315
[2025-11-23 14:07:05] 2025-11-23 19:06:23,407 | INFO     | current chi2=2.6113088778189315 (change=0.2801504561326473 %)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,407 | INFO     | right removable region: 395
[2025-11-23 14:07:05] 2025-11-23 19:06:23,407 | INFO     | sum of square deviations: 20751760535.10337
[2025-11-23 14:07:05] 2025-11-23 19:06:23,411 | INFO     | sum of deviations: 181602498482.75848
[2025-11-23 14:07:05] 2025-11-23 19:06:23,411 | INFO     | mean x: 1763912384.724138
[2025-11-23 14:07:05] 2025-11-23 19:06:23,411 | INFO     | mean y: 3431847.4532019706
[2025-11-23 14:07:05] 2025-11-23 19:06:23,411 | INFO     | intersect: -15432892007.032166
[2025-11-23 14:07:05] 2025-11-23 19:06:23,412 | INFO     | chi2: 4.594777712552606
[2025-11-23 14:07:05] 2025-11-23 19:06:23,412 | INFO     | current chi2=4.594777712552606 (change=34.306052069451205 %)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,412 | INFO     | sum of square deviations: 19994468927.800495
[2025-11-23 14:07:05] 2025-11-23 19:06:23,416 | INFO     | sum of deviations: 146926172110.03265
[2025-11-23 14:07:05] 2025-11-23 19:06:23,416 | INFO     | mean x: 1763912537.224439
[2025-11-23 14:07:05] 2025-11-23 19:06:23,416 | INFO     | mean y: 3438828.5885286783
[2025-11-23 14:07:05] 2025-11-23 19:06:23,416 | INFO     | intersect: -12958391663.990194
[2025-11-23 14:07:05] 2025-11-23 19:06:23,417 | INFO     | chi2: 4.524172221459055
[2025-11-23 14:07:05] 2025-11-23 19:06:23,417 | INFO     | current chi2=4.524172221459055 (change=1.5366465041532262 %)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,417 | INFO     | left removable region: 20
[2025-11-23 14:07:05] 2025-11-23 19:06:23,417 | INFO     | sum of square deviations: 16352016061.184008
[2025-11-23 14:07:05] 2025-11-23 19:06:23,420 | INFO     | sum of deviations: 328189673605.35986
[2025-11-23 14:07:05] 2025-11-23 19:06:23,421 | INFO     | mean x: 1763912354.224
[2025-11-23 14:07:05] 2025-11-23 19:06:23,421 | INFO     | mean y: 3498413.6266666665
[2025-11-23 14:07:05] 2025-11-23 19:06:23,421 | INFO     | intersect: -35398730744.85668
[2025-11-23 14:07:05] 2025-11-23 19:06:23,421 | INFO     | chi2: 0.05263626508577363
[2025-11-23 14:07:05] 2025-11-23 19:06:23,422 | INFO     | current memory leak: 20.07 B/s (using 375 data points, chi2=0.05)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,422 | INFO     | could have reported an average CPU frequency of 2390 MHz (17 samples)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,422 | INFO     | ..............................
[2025-11-23 14:07:05] 2025-11-23 19:06:23,422 | INFO     | . Timing measurements:
[2025-11-23 14:07:05] 2025-11-23 19:06:23,422 | INFO     | . get job = 0 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,422 | INFO     | . initial setup = 2 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,422 | INFO     | . payload setup = 7 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,423 | INFO     | . stage-in = 0 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,423 | INFO     | . payload execution = 25047 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,423 | INFO     | . stage-out = 3 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,423 | INFO     | . log creation = 0 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,423 | INFO     | ..............................
[2025-11-23 14:07:05] 2025-11-23 19:06:23,893 | INFO     | time since job start (25085s) is within the limit (172800.0s)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,974 | INFO     | 
[2025-11-23 14:07:05] 2025-11-23 19:06:23,975 | INFO     | job summary report
[2025-11-23 14:07:05] 2025-11-23 19:06:23,975 | INFO     | --------------------------------------------------
[2025-11-23 14:07:05] 2025-11-23 19:06:23,975 | INFO     | PanDA job id: 6895327966
[2025-11-23 14:07:05] 2025-11-23 19:06:23,975 | INFO     | task id: 47556137
[2025-11-23 14:07:05] 2025-11-23 19:06:23,975 | INFO     | errors: (none)
[2025-11-23 14:07:05] 2025-11-23 19:06:23,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 14:07:05] 2025-11-23 19:06:23,976 | INFO     | pilot state: finished 
[2025-11-23 14:07:05] 2025-11-23 19:06:23,976 | INFO     | transexitcode: 0
[2025-11-23 14:07:05] 2025-11-23 19:06:23,976 | INFO     | exeerrorcode: 0
[2025-11-23 14:07:05] 2025-11-23 19:06:23,976 | INFO     | exeerrordiag: 
[2025-11-23 14:07:05] 2025-11-23 19:06:23,976 | INFO     | exitcode: 0
[2025-11-23 14:07:05] 2025-11-23 19:06:23,976 | INFO     | exitmsg: OK
[2025-11-23 14:07:05] 2025-11-23 19:06:23,977 | INFO     | cpuconsumptiontime: 285744 s
[2025-11-23 14:07:05] 2025-11-23 19:06:23,977 | INFO     | nevents: 1000
[2025-11-23 14:07:05] 2025-11-23 19:06:23,977 | INFO     | neventsw: 0
[2025-11-23 14:07:05] 2025-11-23 19:06:23,977 | INFO     | pid: 24781
[2025-11-23 14:07:05] 2025-11-23 19:06:23,977 | INFO     | pgrp: 24781
[2025-11-23 14:07:05] 2025-11-23 19:06:23,977 | INFO     | corecount: 12
[2025-11-23 14:07:05] 2025-11-23 19:06:23,978 | INFO     | event service: False
[2025-11-23 14:07:05] 2025-11-23 19:06:23,978 | INFO     | sizes: {0: 2297974, 1: 2298830, 6: 2299092, 12: 2299120, 25059: 2336043, 25063: 2345037, 25064: 2345221, 25070: 2345531}
[2025-11-23 14:07:05] 2025-11-23 19:06:23,978 | INFO     | --------------------------------------------------
[2025-11-23 14:07:05] 2025-11-23 19:06:23,978 | INFO     | 
[2025-11-23 14:07:05] 2025-11-23 19:06:23,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 14:07:05] 2025-11-23 19:06:24,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,002 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,005 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 14:07:05] 2025-11-23 19:06:24,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 14:07:05] 2025-11-23 19:06:24,005 | INFO     | job 6895327966 has completed (purged errors)
[2025-11-23 14:07:05] 2025-11-23 19:06:24,006 | INFO     | overall cleanup function is called
[2025-11-23 14:07:05] 2025-11-23 19:06:25,022 | INFO     | --- collectZombieJob: --- 10, [24781]
[2025-11-23 14:07:05] 2025-11-23 19:06:25,022 | INFO     | zombie collector waiting for pid 24781
[2025-11-23 14:07:05] 2025-11-23 19:06:25,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 14:07:05] 2025-11-23 19:06:25,023 | INFO     | collected zombie processes
[2025-11-23 14:07:05] 2025-11-23 19:06:25,023 | INFO     | will attempt to kill all subprocesses of pid=24781
[2025-11-23 14:07:05] 2025-11-23 19:06:25,112 | INFO     | process IDs to be killed: [24781] (in reverse order)
[2025-11-23 14:07:05] 2025-11-23 19:06:25,167 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 14:07:05] 2025-11-23 19:06:25,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 14:07:05] 2025-11-23 19:06:25,171 | INFO     | did not find any defunct processes belonging to 24781
[2025-11-23 14:07:05] 2025-11-23 19:06:25,175 | INFO     | did not find any defunct processes belonging to 24781
[2025-11-23 14:07:05] 2025-11-23 19:06:25,177 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 14:07:05] 2025-11-23 19:06:25,177 | INFO     | ready for new job
[2025-11-23 14:07:05] 2025-11-23 19:06:25,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 14:07:05] 2025-11-23 19:06:25,179 | INFO     | ***************************************
[2025-11-23 14:07:05] 2025-11-23 19:06:25,179 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 14:07:05] 2025-11-23 19:06:25,179 | INFO     | ***************************************
[2025-11-23 14:07:05] 2025-11-23 19:06:25,179 | INFO     | 
[2025-11-23 14:07:05] 2025-11-23 19:06:25,180 | INFO     | architecture information:
[2025-11-23 14:07:05] 2025-11-23 19:06:25,180 | INFO     | executing command: cat /etc/os-release
[2025-11-23 14:07:05] 2025-11-23 19:06:25,196 | INFO     | cat /etc/os-release:
[2025-11-23 14:07:05] NAME="CentOS Linux"
[2025-11-23 14:07:05] VERSION="7 (Core)"
[2025-11-23 14:07:05] ID="centos"
[2025-11-23 14:07:05] ID_LIKE="rhel fedora"
[2025-11-23 14:07:05] VERSION_ID="7"
[2025-11-23 14:07:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 14:07:05] ANSI_COLOR="0;31"
[2025-11-23 14:07:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 14:07:05] HOME_URL="https://www.centos.org/"
[2025-11-23 14:07:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 14:07:05] 
[2025-11-23 14:07:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 14:07:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 14:07:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 14:07:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 14:07:05] 
[2025-11-23 14:07:05] 2025-11-23 19:06:25,196 | INFO     | ***************************************
[2025-11-23 14:07:05] 2025-11-23 19:06:25,699 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 14:07:05] 2025-11-23 19:06:25,717 | INFO     | sufficient remaining disk space (28259123200 B)
[2025-11-23 14:07:05] 2025-11-23 19:06:25,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 14:07:05] 2025-11-23 19:06:25,718 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 14:07:05] 2025-11-23 19:06:25,718 | INFO     | update_server=False
[2025-11-23 14:07:05] 2025-11-23 19:06:25,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 14:07:05] 2025-11-23 19:06:25,718 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 14:07:05] 2025-11-23 19:06:25,719 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 14:07:05] 2025-11-23 19:06:25,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 14:07:05] 2025-11-23 19:06:25,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 14:07:05] 2025-11-23 19:06:25,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 14:07:05] 2025-11-23 19:06:26,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:07:05] 2025-11-23 19:06:26,635 | INFO     | aborting loop
[2025-11-23 14:07:05] 2025-11-23 19:06:26,706 | INFO     | all data control threads have been joined
[2025-11-23 14:07:05] 2025-11-23 19:06:26,720 | INFO     | [job] retrieve thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:26,894 | INFO     | all payload control threads have been joined
[2025-11-23 14:07:05] 2025-11-23 19:06:26,933 | INFO     | [payload] validate_post thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,012 | INFO     | all job control threads have been joined
[2025-11-23 14:07:05] 2025-11-23 19:06:27,047 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,057 | INFO     | [data] copytool_in thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,069 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,549 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,640 | INFO     | [job] job monitor thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,712 | INFO     | [data] control thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,725 | INFO     | [data] copytool_out thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,733 | INFO     | [payload] failed_post thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,814 | INFO     | [job] validate thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:27,899 | INFO     | [payload] control thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:28,018 | INFO     | [job] control thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:28,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 14:07:05] 2025-11-23 19:06:28,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 14:07:05] 2025-11-23 19:06:29,520 | INFO     | [job] queue monitor thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:32,585 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 14:07:05] 2025-11-23 19:06:58,882 | INFO     | [monitor] cgroup control has ended
[2025-11-23 14:07:05] 2025-11-23 19:07:00,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140224292349760)>', '<ExcThread(monitor, started 140223518316288)>']
[2025-11-23 14:07:05] 2025-11-23 19:07:00,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 14:07:05] 2025-11-23 19:07:00,897 | INFO     | [monitor] control thread has ended
[2025-11-23 14:07:05] 2025-11-23 19:07:05,261 | INFO     | all workflow threads have been joined
[2025-11-23 14:07:05] 2025-11-23 19:07:05,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 14:07:05] 2025-11-23 19:07:05,262 | INFO     | traces error code: 0
[2025-11-23 14:07:05] 2025-11-23 19:07:05,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 14:07:05] 2025-11-23 19:07:05,357 [wrapper] ==== pilot stdout END ====
[2025-11-23 14:07:05] 2025-11-23 19:07:05,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 14:07:05] 2025-11-23 19:07:05,365 [wrapper] pilotpid: 18399
[2025-11-23 14:07:05] 2025-11-23 19:07:05,368 [wrapper] Pilot exit status: 0
[2025-11-23 14:07:05] 2025-11-23 19:07:05,382 [wrapper] pandaids: 6895327966
[2025-11-23 14:07:05] 2025-11-23 19:07:05,420 [wrapper] cleanup supervisor_pilot 22611 18400
[2025-11-23 14:07:05] 2025-11-23 19:07:05,424 [wrapper] Test setup, not cleaning
[2025-11-23 14:07:05] 2025-11-23 19:07:05,428 [wrapper] apfmon messages muted
[2025-11-23 14:07:05] 2025-11-23 19:07:05,432 [wrapper] ==== wrapper stdout END ====
[2025-11-23 14:07:05] 2025-11-23 19:07:05,435 [wrapper] ==== wrapper stderr END ====
[2025-11-23 14:07:05]  *** Error codes and diagnostics ***
[2025-11-23 14:07:05]     "exeErrorCode": 0,
[2025-11-23 14:07:05]     "exeErrorDiag": "",
[2025-11-23 14:07:05]     "pilotErrorCode": 0,
[2025-11-23 14:07:05]     "pilotErrorDiag": "",
[2025-11-23 14:07:05]  *** Listing of results directory ***
[2025-11-23 14:07:05] total 1302892
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 10:53 pilot3.tar.gz
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 11:05 queuedata.json
[2025-11-23 14:07:05] -rwx------ 1 boincer umatlas     36292 Nov 21 11:05 runpilot2-wrapper.sh
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas       100 Nov 23 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 14:07:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 07:07 run_atlas
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas       105 Nov 23 07:07 job.xml
[2025-11-23 14:07:05] -rw-r--r-- 2 boincer umatlas 408982546 Nov 23 07:08 EVNT.47483658._000055.pool.root.1
[2025-11-23 14:07:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 07:08 start_atlas.sh
[2025-11-23 14:07:05] drwxrwx--x 2 boincer umatlas      4096 Nov 23 07:08 shared
[2025-11-23 14:07:05] -rw-r--r-- 2 boincer umatlas    590095 Nov 23 07:08 input.tar.gz
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas         0 Nov 23 07:08 boinc_lockfile
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas      2783 Nov 23 07:08 pandaJob.out
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas        57 Nov 23 07:08 setup.sh.local
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas    989784 Nov 23 07:08 agis_schedconf.cvmfs.json
[2025-11-23 14:07:05] drwx------ 5 boincer umatlas      4096 Nov 23 07:08 pilot3
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas       532 Nov 23 13:55 boinc_task_state.xml
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas      5956 Nov 23 14:00 init_data.xml
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas 909883940 Nov 23 14:05 HITS.47556137._000545.pool.root.1
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas      1063 Nov 23 14:06 memory_monitor_summary.json
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas   1526164 Nov 23 14:06 agis_ddmendpoints.agis.ALL.json
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas   2161922 Nov 23 14:06 log.47556137._000545.job.log.tgz.1
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas        95 Nov 23 14:06 pilot_heartbeat.json
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas      8675 Nov 23 14:06 heartbeat.json
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 14:07 boinc_mmap_file
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas        29 Nov 23 14:07 wrapper_checkpoint.txt
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas      4552 Nov 23 14:07 pilotlog.txt
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas   3523737 Nov 23 14:07 log.47556137._000545.job.log.1
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas       353 Nov 23 14:07 output.list
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas       620 Nov 23 14:07 runtime_log
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas   5703680 Nov 23 14:07 result.tar.gz
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 14:07 runtime_log.err
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas       670 Nov 23 14:07 jCUKDm0oig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHXJKDm4EuQ0m.diag
[2025-11-23 14:07:05] -rw-r--r-- 1 boincer umatlas     21048 Nov 23 14:07 stderr.txt
[2025-11-23 14:07:05] HITS file was successfully produced:
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas 909883940 Nov 23 14:05 shared/HITS.pool.root.1
[2025-11-23 14:07:05]  *** Contents of shared directory: ***
[2025-11-23 14:07:05] total 1294132
[2025-11-23 14:07:05] -rw-r--r-- 2 boincer umatlas 408982546 Nov 23 07:08 ATLAS.root_0
[2025-11-23 14:07:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 07:08 start_atlas.sh
[2025-11-23 14:07:05] -rw-r--r-- 2 boincer umatlas    590095 Nov 23 07:08 input.tar.gz
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas 909883940 Nov 23 14:05 HITS.pool.root.1
[2025-11-23 14:07:05] -rw------- 1 boincer umatlas   5703680 Nov 23 14:07 result.tar.gz
14:07:06 (14696): run_atlas exited; CPU time 278914.611845
14:07:06 (14696): called boinc_finish(0)

</stderr_txt>
]]>

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