Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-23 13:37:08 (21856): vboxwrapper version 26210
2025-11-23 13:37:08 (21856): BOINC client version: 8.2.4
2025-11-23 13:37:09 (21856): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-11-23 13:37:09 (21856): Successfully copied 'init_data.xml' to the shared directory.
2025-11-23 13:37:09 (21856): Create VM. (boinc_df819021386f8f9a, slot#4)
2025-11-23 13:37:10 (21856): Setting Memory Size for VM. (4400MB)
2025-11-23 13:37:10 (21856): Setting CPU Count for VM. (4)
2025-11-23 13:37:10 (21856): Setting Chipset Options for VM.
2025-11-23 13:37:10 (21856): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-23 13:37:11 (21856): Setting Boot Options for VM.
2025-11-23 13:37:11 (21856): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-23 13:37:11 (21856): Enabling VM Network Access.
2025-11-23 13:37:12 (21856): Disabling USB Support for VM.
2025-11-23 13:37:12 (21856): Disabling COM Port Support for VM.
2025-11-23 13:37:12 (21856): Disabling LPT Port Support for VM.
2025-11-23 13:37:12 (21856): Disabling Audio Support for VM.
2025-11-23 13:37:13 (21856): Disabling Clipboard Support for VM.
2025-11-23 13:37:13 (21856): Disabling Drag and Drop Support for VM.
2025-11-23 13:37:13 (21856): Adding storage controller(s) to VM.
2025-11-23 13:37:13 (21856): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-23 13:37:14 (21856): Adding VirtualBox Guest Additions to VM.
2025-11-23 13:37:14 (21856): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-23 13:37:14 (21856): forwarding host port 60631 to guest port 80
2025-11-23 13:37:15 (21856): Enabling remote desktop for VM.
2025-11-23 13:37:15 (21856): Required extension pack not installed, remote desktop not enabled.
2025-11-23 13:37:15 (21856): Enabling shared directory for VM.
2025-11-23 13:37:15 (21856): Starting VM using VBoxManage interface. (boinc_df819021386f8f9a, slot#4)
2025-11-23 13:37:20 (21856): Successfully started VM. (PID = '18460')
2025-11-23 13:37:20 (21856): Reporting VM Process ID to BOINC.
2025-11-23 13:37:20 (21856): Guest Log: BIOS: VirtualBox 7.1.8
2025-11-23 13:37:20 (21856): Guest Log: CPUID EDX: 0x178bfbff
2025-11-23 13:37:20 (21856): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-23 13:37:20 (21856): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-23 13:37:20 (21856): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-23 13:37:20 (21856): Detected: Web Application Enabled (http://localhost:60631)
2025-11-23 13:37:20 (21856): Preference change detected
2025-11-23 13:37:20 (21856): Setting CPU throttle for VM. (100%)
2025-11-23 13:37:20 (21856): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 13:37:22 (21856): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-23 13:37:22 (21856): Guest Log: BIOS: Booting from Hard Disk...
2025-11-23 13:37:25 (21856): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-23 13:37:25 (21856): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-23 13:37:25 (21856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-23 13:37:29 (21856): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-23 13:37:29 (21856): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-23 13:37:33 (21856): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000154 main     Log opened 2025-11-23T13:37:31.275102000Z
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000234 main     OS Product: Linux
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000258 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000276 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000292 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000293 main     Process ID: 1316
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000293 main     Package type: LINUX_64BITS_GENERIC
2025-11-23 13:37:33 (21856): Guest Log: 00:00:00.000823 main     5.2.32 r132073 started. Verbose level = 0
2025-11-23 13:37:33 (21856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-23 13:37:33 (21856): Guest Log: [INFO] Mounting shared directory
2025-11-23 13:37:33 (21856): Guest Log: [INFO] Checking for init_data.xml
2025-11-23 13:37:38 (21856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-23 13:37:38 (21856): Guest Log: [INFO] Detected branch: prod
2025-11-23 13:37:38 (21856): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-23 13:37:38 (21856): Guest Log: Copying input files
2025-11-23 13:37:40 (21856): Guest Log: Copied input files into RunAtlas.
2025-11-23 13:37:40 (21856): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-23 13:37:40 (21856): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-23 13:37:40 (21856): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-23 13:37:40 (21856): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 13:37:43 (21856): Guest Log: 00:00:10.076853 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 647 414 000ns (GuestNow=1 763 926 662 924 086 000 ns GuestLast=1 763 905 051 276 672 000 ns fSetTimeLastLoop=true )
2025-11-23 13:37:48 (21856): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 13:37:48 (21856): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 13:37:48 (21856): Guest Log: 2.6.3.0 1595 0 32208 153219 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 13:37:48 (21856): Guest Log: copied the webapp to /var/www
2025-11-23 13:37:48 (21856): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-23 13:37:48 (21856): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-23 13:37:50 (21856): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 13:37:50 (21856): Guest Log:  *** Starting ATLAS job. (PandaID=6895328018 taskID=47556149) ***
2025-11-23 15:17:23 (21856): Status Report: Elapsed Time: '6000.000000'
2025-11-23 15:17:23 (21856): Status Report: CPU Time: '20787.703125'
2025-11-23 16:57:26 (21856): Status Report: Elapsed Time: '12000.000000'
2025-11-23 16:57:26 (21856): Status Report: CPU Time: '44667.937500'
2025-11-23 18:37:28 (21856): Status Report: Elapsed Time: '18000.000000'
2025-11-23 18:37:28 (21856): Status Report: CPU Time: '68553.781250'
2025-11-23 20:17:31 (21856): Status Report: Elapsed Time: '24000.000000'
2025-11-23 20:17:31 (21856): Status Report: CPU Time: '92444.953125'
2025-11-23 21:57:35 (21856): Status Report: Elapsed Time: '30000.370333'
2025-11-23 21:57:35 (21856): Status Report: CPU Time: '116343.906250'
2025-11-23 23:37:38 (21856): Status Report: Elapsed Time: '36000.370333'
2025-11-23 23:37:38 (21856): Status Report: CPU Time: '140235.812500'
2025-11-24 01:17:40 (21856): Status Report: Elapsed Time: '42000.370333'
2025-11-24 01:17:40 (21856): Status Report: CPU Time: '164134.843750'
2025-11-24 02:57:43 (21856): Status Report: Elapsed Time: '48000.370333'
2025-11-24 02:57:43 (21856): Status Report: CPU Time: '188028.140625'
2025-11-24 04:37:46 (21856): Status Report: Elapsed Time: '54000.370333'
2025-11-24 04:37:46 (21856): Status Report: CPU Time: '211918.734375'
2025-11-24 06:17:49 (21856): Status Report: Elapsed Time: '60000.370333'
2025-11-24 06:17:49 (21856): Status Report: CPU Time: '235810.000000'
2025-11-24 07:42:15 (21856): Guest Log:  *** Job finished ***
2025-11-24 07:42:15 (21856): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:30,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:30,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:47,052 | INFO     | [monitor] cgroup control has ended
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:48,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163628009280)>', '<ExcThread(monitor, started 140162851903232)>']
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:48,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:48,927 | INFO     | [monitor] control thread has ended
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,442 | INFO     | all workflow threads have been joined
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,442 | INFO     | end of generic workflow (traces error code: 0)
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,442 | INFO     | traces error code: 0
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,535 [wrapper] ==== pilot stdout END ====
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,539 [wrapper] ==== wrapper stdout RESUME ====
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,542 [wrapper] pilotpid: 6015
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,546 [wrapper] Pilot exit status: 0
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,559 [wrapper] pandaids: 6895328018
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,585 [wrapper] cleanup supervisor_pilot 31640 6016
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,589 [wrapper] Test setup, not cleaning
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,593 [wrapper] apfmon messages muted
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,597 [wrapper] ==== wrapper stdout END ====
2025-11-24 07:42:15 (21856): Guest Log: 2025-11-24 13:41:53,600 [wrapper] ==== wrapper stderr END ====
2025-11-24 07:42:15 (21856): Guest Log:  *** Error codes and diagnostics ***
2025-11-24 07:42:15 (21856): Guest Log:     "exeErrorCode": 0,
2025-11-24 07:42:15 (21856): Guest Log:     "exeErrorDiag": "",
2025-11-24 07:42:15 (21856): Guest Log:     "pilotErrorCode": 0,
2025-11-24 07:42:15 (21856): Guest Log:     "pilotErrorDiag": "",
2025-11-24 07:42:15 (21856): Guest Log:  *** Listing of results directory ***
2025-11-24 07:42:15 (21856): Guest Log: total 938788
2025-11-24 07:42:15 (21856): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 15:53 pilot3.tar.gz
2025-11-24 07:42:15 (21856): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 16:11 runpilot2-wrapper.sh
2025-11-24 07:42:15 (21856): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 16:11 queuedata.json
2025-11-24 07:42:15 (21856): Guest Log: -rwxr-xr-x. 1 atlas atlas      8719 Nov 23 19:37 init_data.xml
2025-11-24 07:42:15 (21856): Guest Log: -rwxr-xr-x. 1 atlas atlas    590099 Nov 23 19:37 input.tar.gz
2025-11-24 07:42:15 (21856): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 23 19:37 start_atlas.sh
2025-11-24 07:42:15 (21856): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 19:37 EVNT.47483658._001025.pool.root.1 -> /data/./ATLAS.root_0
2025-11-24 07:42:15 (21856): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 23 19:37 pandaJob.out
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas    989786 Nov 23 19:39 agis_schedconf.cvmfs.json
2025-11-24 07:42:15 (21856): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 19:39 pilot3
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas 936828092 Nov 24 13:40 HITS.47556149._000119.pool.root.1
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas      1037 Nov 24 13:40 memory_monitor_summary.json
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas   1516227 Nov 24 13:40 agis_ddmendpoints.agis.ALL.json
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas   1745605 Nov 24 13:40 log.47556149._000119.job.log.tgz.1
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas      8598 Nov 24 13:40 heartbeat.json
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas        95 Nov 24 13:41 pilot_heartbeat.json
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 24 13:41 pilotlog.txt
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas   8577586 Nov 24 13:41 log.47556149._000119.job.log.1
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas       353 Nov 24 13:41 output.list
2025-11-24 07:42:15 (21856): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 24 13:41 runtime_log
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas  10342400 Nov 24 13:41 result.tar.gz
2025-11-24 07:42:15 (21856): Guest Log: -rw-r--r--. 1 atlas atlas      8746 Nov 24 13:41 runtime_log.err
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas       665 Nov 24 13:41 6FNNDmRuig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWXJKDmsIWGon.diag
2025-11-24 07:42:15 (21856): Guest Log: Looking for outputfile HITS.47556149._000119.pool.root.1
2025-11-24 07:42:15 (21856): Guest Log: HITS file was successfully produced
2025-11-24 07:42:15 (21856): Guest Log: -rw-------. 1 atlas atlas 936828092 Nov 24 13:40 /home/atlas/RunAtlas/HITS.47556149._000119.pool.root.1
2025-11-24 07:42:18 (21856): Guest Log: Successfully finished the ATLAS job!
2025-11-24 07:42:18 (21856): Guest Log: Copying the results back to the shared directory!
2025-11-24 07:42:18 (21856): Guest Log:  *** Contents of shared directory: ***
2025-11-24 07:42:18 (21856): Guest Log: total 1327932
2025-11-24 07:42:18 (21856): Guest Log: -rwxrwxrwx. 1 root root 412005441 Nov 23 19:37 ATLAS.root_0
2025-11-24 07:42:18 (21856): Guest Log: -rwxrwxrwx. 1 root root 936828092 Nov 24  2025 HITS.pool.root.1
2025-11-24 07:42:18 (21856): Guest Log: -rwxrwxrwx. 1 root root      8719 Nov 23 19:37 init_data.xml
2025-11-24 07:42:18 (21856): Guest Log: -rwxrwxrwx. 1 root root    590099 Nov 23 12:26 input.tar.gz
2025-11-24 07:42:18 (21856): Guest Log: -rwxrwxrwx. 1 root root  10342400 Nov 24  2025 result.tar.gz
2025-11-24 07:42:18 (21856): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 23 12:26 start_atlas.sh
2025-11-24 07:42:18 (21856): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-24 07:42:18 (21856): VM Completion File Detected.
2025-11-24 07:42:18 (21856): Powering off VM.
2025-11-24 07:42:18 (21856): Successfully stopped VM.
2025-11-24 07:42:18 (21856): Deregistering VM. (boinc_df819021386f8f9a, slot#4)
2025-11-24 07:42:18 (21856): Removing network bandwidth throttle group from VM.
2025-11-24 07:42:18 (21856): Removing VM from VirtualBox.
2025-11-24 07:42:24 (21856): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN