Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:55:08 (30899): wrapper (7.7.26015): starting
06:55:08 (30899): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 06:55:08] Arguments: --nthreads 8
[2025-11-23 06:55:08] Threads: 8
[2025-11-23 06:55:08] Checking for CVMFS
[2025-11-23 06:55:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 06:55:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 06:55:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 06:55:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 06:55:08] 2.11.2.0 2830 50115 84740 153207 1 82 12665908 20275201 1 130560 0 9881422 99.753 3152975 27874 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 06:55:08] CVMFS is ok
[2025-11-23 06:55:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 06:55:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 06:55:08] Further information can be found at the LHC@home message board.
[2025-11-23 06:55:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 06:55:08] Checking for apptainer binary...
[2025-11-23 06:55:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 06:55:08] Running /usr/bin/apptainer --version
[2025-11-23 06:55:08] apptainer version 1.3.2-1.el7
[2025-11-23 06:55:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 06:55:10] c-204-14.aglt2.org
[2025-11-23 06:55:10] apptainer works
[2025-11-23 06:55:10] Set ATHENA_PROC_NUMBER=8
[2025-11-23 06:55:10] Set ATHENA_CORE_NUMBER=8
[2025-11-23 06:55:10] Starting ATLAS job with PandaID=6895340585
[2025-11-23 06:55:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:19:48]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:19:48] 2025-11-24 00:19:04,066 | INFO     | time since job start (44616s) is within the limit (172800.0s)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,358 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 19:19:48] 2025-11-24 00:19:04,362 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-23 19:19:48] 2025-11-24 00:19:04,364 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895340585/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,365 | INFO     | extracted standard info from prmon json
[2025-11-23 19:19:48] 2025-11-24 00:19:04,366 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:19:48] 2025-11-24 00:19:04,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:19:48] 2025-11-24 00:19:04,380 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:19:48] 2025-11-24 00:19:04,381 | INFO     | sum of square deviations: 121124162580.94125
[2025-11-23 19:19:48] 2025-11-24 00:19:04,395 | INFO     | sum of deviations: 895164621735.4702
[2025-11-23 19:19:48] 2025-11-24 00:19:04,395 | INFO     | mean x: 1763921225.6470587
[2025-11-23 19:19:48] 2025-11-24 00:19:04,395 | INFO     | mean y: 3151674.3119015046
[2025-11-23 19:19:48] 2025-11-24 00:19:04,395 | INFO     | intersect: -13033057147.130718
[2025-11-23 19:19:48] 2025-11-24 00:19:04,396 | INFO     | chi2: 5.483385047600223
[2025-11-23 19:19:48] 2025-11-24 00:19:04,397 | INFO     | sum of square deviations: 118655823351.33331
[2025-11-23 19:19:48] 2025-11-24 00:19:04,408 | INFO     | sum of deviations: 1142020000582.9102
[2025-11-23 19:19:48] 2025-11-24 00:19:04,408 | INFO     | mean x: 1763921073.1515152
[2025-11-23 19:19:48] 2025-11-24 00:19:04,408 | INFO     | mean y: 3166918.082644628
[2025-11-23 19:19:48] 2025-11-24 00:19:04,408 | INFO     | intersect: -16973944597.330097
[2025-11-23 19:19:48] 2025-11-24 00:19:04,409 | INFO     | chi2: 2.7674437595802464
[2025-11-23 19:19:48] 2025-11-24 00:19:04,409 | INFO     | current chi2=2.7674437595802464 (change=49.53037702885 %)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,410 | INFO     | sum of square deviations: 116221252196.6964
[2025-11-23 19:19:48] 2025-11-24 00:19:04,421 | INFO     | sum of deviations: 1216312280503.8955
[2025-11-23 19:19:48] 2025-11-24 00:19:04,421 | INFO     | mean x: 1763920920.6560333
[2025-11-23 19:19:48] 2025-11-24 00:19:04,421 | INFO     | mean y: 3171567.725381415
[2025-11-23 19:19:48] 2025-11-24 00:19:04,421 | INFO     | intersect: -18457124093.180058
[2025-11-23 19:19:48] 2025-11-24 00:19:04,422 | INFO     | chi2: 2.4166445644934114
[2025-11-23 19:19:48] 2025-11-24 00:19:04,422 | INFO     | current chi2=2.4166445644934114 (change=12.675928602792732 %)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,422 | INFO     | right removable region: 720
[2025-11-23 19:19:48] 2025-11-24 00:19:04,423 | INFO     | sum of square deviations: 118655534821.33328
[2025-11-23 19:19:48] 2025-11-24 00:19:04,434 | INFO     | sum of deviations: 676219658990.0616
[2025-11-23 19:19:48] 2025-11-24 00:19:04,434 | INFO     | mean x: 1763921378.1515152
[2025-11-23 19:19:48] 2025-11-24 00:19:04,434 | INFO     | mean y: 3165177.990358127
[2025-11-23 19:19:48] 2025-11-24 00:19:04,434 | INFO     | intersect: -10049449009.918911
[2025-11-23 19:19:48] 2025-11-24 00:19:04,435 | INFO     | chi2: 3.255110181616585
[2025-11-23 19:19:48] 2025-11-24 00:19:04,435 | INFO     | current chi2=3.255110181616585 (change=40.63684834532697 %)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,436 | INFO     | sum of square deviations: 116220675136.69635
[2025-11-23 19:19:48] 2025-11-24 00:19:04,447 | INFO     | sum of deviations: 634000020371.9288
[2025-11-23 19:19:48] 2025-11-24 00:19:04,447 | INFO     | mean x: 1763921530.6560333
[2025-11-23 19:19:48] 2025-11-24 00:19:04,447 | INFO     | mean y: 3167820.947295423
[2025-11-23 19:19:48] 2025-11-24 00:19:04,447 | INFO     | intersect: -9619270570.974422
[2025-11-23 19:19:48] 2025-11-24 00:19:04,448 | INFO     | chi2: 3.2244210138903595
[2025-11-23 19:19:48] 2025-11-24 00:19:04,448 | INFO     | current chi2=3.2244210138903595 (change=0.9427996600405207 %)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,448 | INFO     | left removable region: 20
[2025-11-23 19:19:48] 2025-11-24 00:19:04,449 | INFO     | sum of square deviations: 106358788111.43277
[2025-11-23 19:19:48] 2025-11-24 00:19:04,459 | INFO     | sum of deviations: 881562172548.9719
[2025-11-23 19:19:48] 2025-11-24 00:19:04,459 | INFO     | mean x: 1763921500.162857
[2025-11-23 19:19:48] 2025-11-24 00:19:04,459 | INFO     | mean y: 3192654.1142857145
[2025-11-23 19:19:48] 2025-11-24 00:19:04,459 | INFO     | intersect: -14617192717.898603
[2025-11-23 19:19:48] 2025-11-24 00:19:04,460 | INFO     | chi2: 0.1154006325586098
[2025-11-23 19:19:48] 2025-11-24 00:19:04,460 | INFO     | current memory leak: 8.29 B/s (using 700 data points, chi2=0.12)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,461 | INFO     | could have reported an average CPU frequency of 2178 MHz (28 samples)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,461 | INFO     | ..............................
[2025-11-23 19:19:48] 2025-11-24 00:19:04,461 | INFO     | . Timing measurements:
[2025-11-23 19:19:48] 2025-11-24 00:19:04,461 | INFO     | . get job = 0 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,461 | INFO     | . initial setup = 2 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,462 | INFO     | . payload setup = 9 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,462 | INFO     | . stage-in = 0 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,462 | INFO     | . payload execution = 44573 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,462 | INFO     | . stage-out = 4 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,462 | INFO     | . log creation = 0 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,462 | INFO     | ..............................
[2025-11-23 19:19:48] 2025-11-24 00:19:04,560 | INFO     | 
[2025-11-23 19:19:48] 2025-11-24 00:19:04,562 | INFO     | job summary report
[2025-11-23 19:19:48] 2025-11-24 00:19:04,562 | INFO     | --------------------------------------------------
[2025-11-23 19:19:48] 2025-11-24 00:19:04,562 | INFO     | PanDA job id: 6895340585
[2025-11-23 19:19:48] 2025-11-24 00:19:04,562 | INFO     | task id: 47556149
[2025-11-23 19:19:48] 2025-11-24 00:19:04,562 | INFO     | errors: (none)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | pilot state: finished 
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | transexitcode: 0
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | exeerrorcode: 0
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | exeerrordiag: 
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | exitcode: 0
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | exitmsg: OK
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | cpuconsumptiontime: 343794 s
[2025-11-23 19:19:48] 2025-11-24 00:19:04,563 | INFO     | nevents: 1000
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | neventsw: 0
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | pid: 8751
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | pgrp: 8751
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | corecount: 8
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | event service: False
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | sizes: {0: 2298804, 6: 2299066, 11: 2299094, 44585: 2344879, 44586: 2344878, 44590: 2353928, 44593: 2354112, 44599: 2354358}
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | --------------------------------------------------
[2025-11-23 19:19:48] 2025-11-24 00:19:04,564 | INFO     | 
[2025-11-23 19:19:48] 2025-11-24 00:19:04,565 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 19:19:48] 2025-11-24 00:19:04,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,591 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,591 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,594 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,594 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:19:48] 2025-11-24 00:19:04,595 | INFO     | job 6895340585 has completed (purged errors)
[2025-11-23 19:19:48] 2025-11-24 00:19:04,595 | INFO     | overall cleanup function is called
[2025-11-23 19:19:48] 2025-11-24 00:19:05,611 | INFO     | --- collectZombieJob: --- 10, [8751]
[2025-11-23 19:19:48] 2025-11-24 00:19:05,612 | INFO     | zombie collector waiting for pid 8751
[2025-11-23 19:19:48] 2025-11-24 00:19:05,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:19:48] 2025-11-24 00:19:05,612 | INFO     | collected zombie processes
[2025-11-23 19:19:48] 2025-11-24 00:19:05,612 | INFO     | will attempt to kill all subprocesses of pid=8751
[2025-11-23 19:19:48] 2025-11-24 00:19:05,704 | INFO     | process IDs to be killed: [8751] (in reverse order)
[2025-11-23 19:19:48] 2025-11-24 00:19:05,762 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:19:48] 2025-11-24 00:19:05,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:19:48] 2025-11-24 00:19:05,766 | INFO     | did not find any defunct processes belonging to 8751
[2025-11-23 19:19:48] 2025-11-24 00:19:05,770 | INFO     | did not find any defunct processes belonging to 8751
[2025-11-23 19:19:48] 2025-11-24 00:19:05,773 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:19:48] 2025-11-24 00:19:05,773 | INFO     | ready for new job
[2025-11-23 19:19:48] 2025-11-24 00:19:05,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:19:48] 2025-11-24 00:19:05,778 | INFO     | ***************************************
[2025-11-23 19:19:48] 2025-11-24 00:19:05,778 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:19:48] 2025-11-24 00:19:05,778 | INFO     | ***************************************
[2025-11-23 19:19:48] 2025-11-24 00:19:05,778 | INFO     | 
[2025-11-23 19:19:48] 2025-11-24 00:19:05,779 | INFO     | architecture information:
[2025-11-23 19:19:48] 2025-11-24 00:19:05,779 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:19:48] 2025-11-24 00:19:05,798 | INFO     | cat /etc/os-release:
[2025-11-23 19:19:48] NAME="CentOS Linux"
[2025-11-23 19:19:48] VERSION="7 (Core)"
[2025-11-23 19:19:48] ID="centos"
[2025-11-23 19:19:48] ID_LIKE="rhel fedora"
[2025-11-23 19:19:48] VERSION_ID="7"
[2025-11-23 19:19:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:19:48] ANSI_COLOR="0;31"
[2025-11-23 19:19:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:19:48] HOME_URL="https://www.centos.org/"
[2025-11-23 19:19:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:19:48] 
[2025-11-23 19:19:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:19:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:19:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:19:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:19:48] 
[2025-11-23 19:19:48] 2025-11-24 00:19:05,799 | INFO     | ***************************************
[2025-11-23 19:19:48] 2025-11-24 00:19:06,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 19:19:48] 2025-11-24 00:19:06,323 | INFO     | sufficient remaining disk space (17482907648 B)
[2025-11-23 19:19:48] 2025-11-24 00:19:06,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:19:48] 2025-11-24 00:19:06,324 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:19:48] 2025-11-24 00:19:06,324 | INFO     | update_server=False
[2025-11-23 19:19:48] 2025-11-24 00:19:06,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:19:48] 2025-11-24 00:19:06,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:19:48] 2025-11-24 00:19:06,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:19:48] 2025-11-24 00:19:06,502 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 19:19:48] 2025-11-24 00:19:06,502 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 19:19:48] 2025-11-24 00:19:06,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:19:48] 2025-11-24 00:19:06,503 | INFO     | will abort loop
[2025-11-23 19:19:48] 2025-11-24 00:19:06,623 | INFO     | all data control threads have been joined
[2025-11-23 19:19:48] 2025-11-24 00:19:07,234 | INFO     | all job control threads have been joined
[2025-11-23 19:19:48] 2025-11-24 00:19:07,330 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:07,331 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:07,406 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:07,443 | INFO     | all payload control threads have been joined
[2025-11-23 19:19:48] 2025-11-24 00:19:07,508 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:07,630 | INFO     | [data] control thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:07,808 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:07,984 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:08,063 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:08,085 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:08,240 | INFO     | [job] control thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:08,331 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:08,448 | INFO     | [payload] control thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:08,513 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:08,751 | INFO     | [job] validate thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:09,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:19:48] 2025-11-24 00:19:13,052 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:16,871 | INFO     | job.realtimelogging is not enabled
[2025-11-23 19:19:48] 2025-11-24 00:19:17,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:19:48] 2025-11-24 00:19:37,271 | INFO     | PID=2194 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 19:19:48] 2025-11-24 00:19:37,272 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:19:48] 2025-11-24 00:19:37,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:19:48] 2025-11-24 00:19:37,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:19:48] 2025-11-24 00:19:42,083 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:19:48] 2025-11-24 00:19:43,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649237088064)>', '<ExcThread(monitor, started 139648370206464)>']
[2025-11-23 19:19:48] 2025-11-24 00:19:44,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:19:48] 2025-11-24 00:19:44,303 | INFO     | [monitor] control thread has ended
[2025-11-23 19:19:48] 2025-11-24 00:19:48,501 | INFO     | all workflow threads have been joined
[2025-11-23 19:19:48] 2025-11-24 00:19:48,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:19:48] 2025-11-24 00:19:48,502 | INFO     | traces error code: 0
[2025-11-23 19:19:48] 2025-11-24 00:19:48,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:19:48] 2025-11-24 00:19:48,623 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:19:48] 2025-11-24 00:19:48,628 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:19:48] 2025-11-24 00:19:48,632 [wrapper] pilotpid: 2194
[2025-11-23 19:19:48] 2025-11-24 00:19:48,637 [wrapper] Pilot exit status: 0
[2025-11-23 19:19:48] 2025-11-24 00:19:48,654 [wrapper] pandaids: 6895340585
[2025-11-23 19:19:48] 2025-11-24 00:19:48,708 [wrapper] cleanup supervisor_pilot  8020 2195
[2025-11-23 19:19:48] 2025-11-24 00:19:48,713 [wrapper] Test setup, not cleaning
[2025-11-23 19:19:48] 2025-11-24 00:19:48,718 [wrapper] apfmon messages muted
[2025-11-23 19:19:48] 2025-11-24 00:19:48,723 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:19:48] 2025-11-24 00:19:48,728 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:19:48]  *** Error codes and diagnostics ***
[2025-11-23 19:19:48]     "exeErrorCode": 0,
[2025-11-23 19:19:48]     "exeErrorDiag": "",
[2025-11-23 19:19:48]     "pilotErrorCode": 0,
[2025-11-23 19:19:48]     "pilotErrorDiag": "",
[2025-11-23 19:19:48]  *** Listing of results directory ***
[2025-11-23 19:19:48] total 1305120
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 09:16 pilot3.tar.gz
[2025-11-23 19:19:48] -rwx------ 1 boincer umatlas     36292 Nov 22 09:35 runpilot2-wrapper.sh
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 09:35 queuedata.json
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas       100 Nov 23 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:19:48] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 06:55 run_atlas
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas       105 Nov 23 06:55 job.xml
[2025-11-23 19:19:48] -rw-r--r-- 2 boincer umatlas 406675112 Nov 23 06:55 EVNT.47483658._001092.pool.root.1
[2025-11-23 19:19:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 06:55 start_atlas.sh
[2025-11-23 19:19:48] drwxrwx--x 2 boincer umatlas      4096 Nov 23 06:55 shared
[2025-11-23 19:19:48] -rw-r--r-- 2 boincer umatlas    590106 Nov 23 06:55 input.tar.gz
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas         0 Nov 23 06:55 boinc_lockfile
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 06:55 pandaJob.out
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas        57 Nov 23 06:55 setup.sh.local
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas    989784 Nov 23 06:55 agis_schedconf.cvmfs.json
[2025-11-23 19:19:48] drwx------ 5 boincer umatlas      4096 Nov 23 06:55 pilot3
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas       532 Nov 23 19:08 boinc_task_state.xml
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 19:10 init_data.xml
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas 909624124 Nov 23 19:18 HITS.47556149._000787.pool.root.1
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas      1064 Nov 23 19:18 memory_monitor_summary.json
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas   1526164 Nov 23 19:18 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas   1979212 Nov 23 19:18 log.47556149._000787.job.log.tgz.1
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas      8659 Nov 23 19:19 heartbeat.json
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas        95 Nov 23 19:19 pilot_heartbeat.json
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 19:19 boinc_mmap_file
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas        29 Nov 23 19:19 wrapper_checkpoint.txt
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas      5003 Nov 23 19:19 pilotlog.txt
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas   6128557 Nov 23 19:19 log.47556149._000787.job.log.1
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas       353 Nov 23 19:19 output.list
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas       620 Nov 23 19:19 runtime_log
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas   8130560 Nov 23 19:19 result.tar.gz
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 19:19 runtime_log.err
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas       668 Nov 23 19:19 54lMDmms3g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmR8HKDmlNaGym.diag
[2025-11-23 19:19:48] -rw-r--r-- 1 boincer umatlas     21255 Nov 23 19:19 stderr.txt
[2025-11-23 19:19:48] HITS file was successfully produced:
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas 909624124 Nov 23 19:18 shared/HITS.pool.root.1
[2025-11-23 19:19:48]  *** Contents of shared directory: ***
[2025-11-23 19:19:48] total 1293992
[2025-11-23 19:19:48] -rw-r--r-- 2 boincer umatlas 406675112 Nov 23 06:55 ATLAS.root_0
[2025-11-23 19:19:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 06:55 start_atlas.sh
[2025-11-23 19:19:48] -rw-r--r-- 2 boincer umatlas    590106 Nov 23 06:55 input.tar.gz
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas 909624124 Nov 23 19:18 HITS.pool.root.1
[2025-11-23 19:19:48] -rw------- 1 boincer umatlas   8130560 Nov 23 19:19 result.tar.gz
19:19:50 (30899): run_atlas exited; CPU time 341343.916686
19:19:50 (30899): called boinc_finish(0)

</stderr_txt>
]]>

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