Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:00:56 (3313412): wrapper (7.7.26015): starting
11:00:56 (3313412): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 11:00:56] Arguments: --nthreads 9
[2025-11-23 11:00:56] Threads: 9
[2025-11-23 11:00:56] Checking for CVMFS
[2025-11-23 11:00:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:00:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:00:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:00:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:00:56] 2.13.3.0 3025293 4845 92284 153213 2 81 12593456 37030912 1932 16776704 0 5364465 99.895 630524 15903 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 11:00:56] CVMFS is ok
[2025-11-23 11:00:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:00:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:00:56] Further information can be found at the LHC@home message board.
[2025-11-23 11:00:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:00:56] Checking for apptainer binary...
[2025-11-23 11:00:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:00:56] Running /usr/bin/apptainer --version
[2025-11-23 11:00:56] apptainer version 1.4.4-1.el9
[2025-11-23 11:00:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:00:57] c-205-37.aglt2.org
[2025-11-23 11:00:57] apptainer works
[2025-11-23 11:00:57] Set ATHENA_PROC_NUMBER=9
[2025-11-23 11:00:57] Set ATHENA_CORE_NUMBER=9
[2025-11-23 11:00:57] Starting ATLAS job with PandaID=6895340545
[2025-11-23 11:00:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:51:01]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:51:01] 2025-11-24 00:49:58,303 | INFO     | monitor loop #2357: job 0:6895340545 is in state 'finished'
[2025-11-23 19:51:01] 2025-11-24 00:49:58,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,156 | INFO     | time since job start (31732s) is within the limit (172800.0s)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,507 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 19:51:01] 2025-11-24 00:49:59,513 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2656.4523125
[2025-11-23 19:51:01] 2025-11-24 00:49:59,519 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895340545/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,520 | INFO     | extracted standard info from prmon json
[2025-11-23 19:51:01] 2025-11-24 00:49:59,520 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:51:01] 2025-11-24 00:49:59,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:51:01] 2025-11-24 00:49:59,531 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:51:01] 2025-11-24 00:49:59,532 | INFO     | sum of square deviations: 43599768390.15185
[2025-11-23 19:51:01] 2025-11-24 00:49:59,539 | INFO     | sum of deviations: 641603351751.362
[2025-11-23 19:51:01] 2025-11-24 00:49:59,540 | INFO     | mean x: 1763929520.5596154
[2025-11-23 19:51:01] 2025-11-24 00:49:59,540 | INFO     | mean y: 3109563.4076923076
[2025-11-23 19:51:01] 2025-11-24 00:49:59,540 | INFO     | intersect: -25954438708.79497
[2025-11-23 19:51:01] 2025-11-24 00:49:59,541 | INFO     | chi2: 4.833361076277784
[2025-11-23 19:51:01] 2025-11-24 00:49:59,542 | INFO     | sum of square deviations: 42354135885.13395
[2025-11-23 19:51:01] 2025-11-24 00:49:59,549 | INFO     | sum of deviations: 798028317561.7865
[2025-11-23 19:51:01] 2025-11-24 00:49:59,549 | INFO     | mean x: 1763929368.0601943
[2025-11-23 19:51:01] 2025-11-24 00:49:59,549 | INFO     | mean y: 3128696.13592233
[2025-11-23 19:51:01] 2025-11-24 00:49:59,549 | INFO     | intersect: -33232482336.244606
[2025-11-23 19:51:01] 2025-11-24 00:49:59,550 | INFO     | chi2: 2.4892496927638166
[2025-11-23 19:51:01] 2025-11-24 00:49:59,550 | INFO     | current chi2=2.4892496927638166 (change=48.498577832699176 %)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,551 | INFO     | sum of square deviations: 41132457317.61564
[2025-11-23 19:51:01] 2025-11-24 00:49:59,559 | INFO     | sum of deviations: 828598016357.7643
[2025-11-23 19:51:01] 2025-11-24 00:49:59,559 | INFO     | mean x: 1763929215.5607843
[2025-11-23 19:51:01] 2025-11-24 00:49:59,559 | INFO     | mean y: 3132485.588235294
[2025-11-23 19:51:01] 2025-11-24 00:49:59,559 | INFO     | intersect: -35530563877.92138
[2025-11-23 19:51:01] 2025-11-24 00:49:59,560 | INFO     | chi2: 2.1810761811806056
[2025-11-23 19:51:01] 2025-11-24 00:49:59,560 | INFO     | current chi2=2.1810761811806056 (change=12.38017674478632 %)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,560 | INFO     | right removable region: 509
[2025-11-23 19:51:01] 2025-11-24 00:49:59,561 | INFO     | sum of square deviations: 42354116975.133934
[2025-11-23 19:51:01] 2025-11-24 00:49:59,568 | INFO     | sum of deviations: 494038265284.65625
[2025-11-23 19:51:01] 2025-11-24 00:49:59,568 | INFO     | mean x: 1763929673.0601943
[2025-11-23 19:51:01] 2025-11-24 00:49:59,568 | INFO     | mean y: 3127586.236893204
[2025-11-23 19:51:01] 2025-11-24 00:49:59,569 | INFO     | intersect: -20572174603.970875
[2025-11-23 19:51:01] 2025-11-24 00:49:59,569 | INFO     | chi2: 2.820162356583119
[2025-11-23 19:51:01] 2025-11-24 00:49:59,569 | INFO     | current chi2=2.820162356583119 (change=41.65214822404802 %)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,570 | INFO     | sum of square deviations: 41132450789.735245
[2025-11-23 19:51:01] 2025-11-24 00:49:59,577 | INFO     | sum of deviations: 462349064372.64716
[2025-11-23 19:51:01] 2025-11-24 00:49:59,578 | INFO     | mean x: 1763929825.5588236
[2025-11-23 19:51:01] 2025-11-24 00:49:59,578 | INFO     | mean y: 3131537.8784313723
[2025-11-23 19:51:01] 2025-11-24 00:49:59,578 | INFO     | intersect: -19824310999.77003
[2025-11-23 19:51:01] 2025-11-24 00:49:59,579 | INFO     | chi2: 2.795650151131142
[2025-11-23 19:51:01] 2025-11-24 00:49:59,579 | INFO     | current chi2=2.795650151131142 (change=0.8691771023309312 %)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,579 | INFO     | left removable region: 20
[2025-11-23 19:51:01] 2025-11-24 00:49:59,580 | INFO     | sum of square deviations: 36257722439.28001
[2025-11-23 19:51:01] 2025-11-24 00:49:59,586 | INFO     | sum of deviations: 596347703024.9346
[2025-11-23 19:51:01] 2025-11-24 00:49:59,587 | INFO     | mean x: 1763929795.0593047
[2025-11-23 19:51:01] 2025-11-24 00:49:59,587 | INFO     | mean y: 3161808.2781186095
[2025-11-23 19:51:01] 2025-11-24 00:49:59,587 | INFO     | intersect: -29009015758.652054
[2025-11-23 19:51:01] 2025-11-24 00:49:59,588 | INFO     | chi2: 0.11404953820101574
[2025-11-23 19:51:01] 2025-11-24 00:49:59,588 | INFO     | current memory leak: 16.45 B/s (using 489 data points, chi2=0.11)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,589 | INFO     | could have reported an average CPU frequency of 2621 MHz (21 samples)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,589 | INFO     | ..............................
[2025-11-23 19:51:01] 2025-11-24 00:49:59,589 | INFO     | . Timing measurements:
[2025-11-23 19:51:01] 2025-11-24 00:49:59,589 | INFO     | . get job = 0 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,589 | INFO     | . initial setup = 2 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,589 | INFO     | . payload setup = 5 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,589 | INFO     | . stage-in = 0 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,590 | INFO     | . payload execution = 31697 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,590 | INFO     | . stage-out = 3 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,590 | INFO     | . log creation = 0 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,590 | INFO     | ..............................
[2025-11-23 19:51:01] 2025-11-24 00:49:59,696 | INFO     | 
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | job summary report
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | --------------------------------------------------
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | PanDA job id: 6895340545
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | task id: 47556137
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | errors: (none)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | pilot state: finished 
[2025-11-23 19:51:01] 2025-11-24 00:49:59,697 | INFO     | transexitcode: 0
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | exeerrorcode: 0
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | exeerrordiag: 
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | exitcode: 0
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | exitmsg: OK
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | cpuconsumptiontime: 279914 s
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | nevents: 1000
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | neventsw: 0
[2025-11-23 19:51:01] 2025-11-24 00:49:59,698 | INFO     | pid: 3323608
[2025-11-23 19:51:01] 2025-11-24 00:49:59,699 | INFO     | pgrp: 3323608
[2025-11-23 19:51:01] 2025-11-24 00:49:59,699 | INFO     | corecount: 9
[2025-11-23 19:51:01] 2025-11-24 00:49:59,699 | INFO     | event service: False
[2025-11-23 19:51:01] 2025-11-24 00:49:59,699 | INFO     | sizes: {0: 2298641, 1: 2298783, 4: 2299045, 11: 2299073, 31706: 2338548, 31707: 2338547, 31710: 2347725, 31713: 2347781, 31717: 2348027}
[2025-11-23 19:51:01] 2025-11-24 00:49:59,699 | INFO     | --------------------------------------------------
[2025-11-23 19:51:01] 2025-11-24 00:49:59,699 | INFO     | 
[2025-11-23 19:51:01] 2025-11-24 00:49:59,699 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 19:51:01] 2025-11-24 00:49:59,716 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,716 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,716 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,718 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:51:01] 2025-11-24 00:49:59,719 | INFO     | job 6895340545 has completed (purged errors)
[2025-11-23 19:51:01] 2025-11-24 00:49:59,719 | INFO     | overall cleanup function is called
[2025-11-23 19:51:01] 2025-11-24 00:50:00,735 | INFO     | --- collectZombieJob: --- 10, [3323608]
[2025-11-23 19:51:01] 2025-11-24 00:50:00,736 | INFO     | zombie collector waiting for pid 3323608
[2025-11-23 19:51:01] 2025-11-24 00:50:00,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:51:01] 2025-11-24 00:50:00,736 | INFO     | collected zombie processes
[2025-11-23 19:51:01] 2025-11-24 00:50:00,736 | INFO     | will attempt to kill all subprocesses of pid=3323608
[2025-11-23 19:51:01] 2025-11-24 00:50:00,931 | INFO     | process IDs to be killed: [3323608] (in reverse order)
[2025-11-23 19:51:01] 2025-11-24 00:50:00,985 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:51:01] 2025-11-24 00:50:00,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:51:01] 2025-11-24 00:50:00,992 | INFO     | did not find any defunct processes belonging to 3323608
[2025-11-23 19:51:01] 2025-11-24 00:50:00,996 | INFO     | did not find any defunct processes belonging to 3323608
[2025-11-23 19:51:01] 2025-11-24 00:50:00,997 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:51:01] 2025-11-24 00:50:00,998 | INFO     | ready for new job
[2025-11-23 19:51:01] 2025-11-24 00:50:00,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:51:01] 2025-11-24 00:50:01,001 | INFO     | ***************************************
[2025-11-23 19:51:01] 2025-11-24 00:50:01,001 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:51:01] 2025-11-24 00:50:01,001 | INFO     | ***************************************
[2025-11-23 19:51:01] 2025-11-24 00:50:01,001 | INFO     | 
[2025-11-23 19:51:01] 2025-11-24 00:50:01,003 | INFO     | architecture information:
[2025-11-23 19:51:01] 2025-11-24 00:50:01,004 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:51:01] 2025-11-24 00:50:01,016 | INFO     | cat /etc/os-release:
[2025-11-23 19:51:01] NAME="CentOS Linux"
[2025-11-23 19:51:01] VERSION="7 (Core)"
[2025-11-23 19:51:01] ID="centos"
[2025-11-23 19:51:01] ID_LIKE="rhel fedora"
[2025-11-23 19:51:01] VERSION_ID="7"
[2025-11-23 19:51:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:51:01] ANSI_COLOR="0;31"
[2025-11-23 19:51:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:51:01] HOME_URL="https://www.centos.org/"
[2025-11-23 19:51:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:51:01] 
[2025-11-23 19:51:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:51:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:51:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:51:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:51:01] 
[2025-11-23 19:51:01] 2025-11-24 00:50:01,016 | INFO     | ***************************************
[2025-11-23 19:51:01] 2025-11-24 00:50:01,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 19:51:01] 2025-11-24 00:50:01,531 | INFO     | sufficient remaining disk space (38426116096 B)
[2025-11-23 19:51:01] 2025-11-24 00:50:01,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:51:01] 2025-11-24 00:50:01,531 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:51:01] 2025-11-24 00:50:01,531 | INFO     | update_server=False
[2025-11-23 19:51:01] 2025-11-24 00:50:01,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:51:01] 2025-11-24 00:50:01,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:51:01] 2025-11-24 00:50:01,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:51:01] 2025-11-24 00:50:01,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:51:01] 2025-11-24 00:50:01,812 | INFO     | aborting loop
[2025-11-23 19:51:01] 2025-11-24 00:50:02,142 | INFO     | all data control threads have been joined
[2025-11-23 19:51:01] 2025-11-24 00:50:02,455 | INFO     | all payload control threads have been joined
[2025-11-23 19:51:01] 2025-11-24 00:50:02,537 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:02,538 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:02,616 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:02,760 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:02,817 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:02,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:51:01] 2025-11-24 00:50:03,053 | INFO     | all job control threads have been joined
[2025-11-23 19:51:01] 2025-11-24 00:50:03,098 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:03,130 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:03,147 | INFO     | [data] control thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:03,246 | INFO     | [job] validate thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:03,459 | INFO     | [payload] control thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:03,516 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:03,616 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:03,718 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:04,058 | INFO     | [job] control thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:04,865 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:05,538 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:51:01] 2025-11-24 00:50:32,475 | INFO     | PID=3317125 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 19:51:01] 2025-11-24 00:50:32,476 | INFO     | .. there are 3 such processes running
[2025-11-23 19:51:01] 2025-11-24 00:50:32,477 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:51:01] 2025-11-24 00:50:32,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:51:01] 2025-11-24 00:50:32,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:51:01] 2025-11-24 00:50:56,083 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:51:01] 2025-11-24 00:50:56,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838018836288)>', '<ExcThread(monitor, started 139837533308672)>']
[2025-11-23 19:51:01] 2025-11-24 00:50:56,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:51:01] 2025-11-24 00:50:56,590 | INFO     | [monitor] control thread has ended
[2025-11-23 19:51:01] 2025-11-24 00:51:01,538 | INFO     | all workflow threads have been joined
[2025-11-23 19:51:01] 2025-11-24 00:51:01,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:51:01] 2025-11-24 00:51:01,539 | INFO     | traces error code: 0
[2025-11-23 19:51:01] 2025-11-24 00:51:01,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:51:01] 2025-11-24 00:51:01,646 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:51:01] 2025-11-24 00:51:01,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:51:01] 2025-11-24 00:51:01,651 [wrapper] pilotpid: 3317125
[2025-11-23 19:51:01] 2025-11-24 00:51:01,654 [wrapper] Pilot exit status: 0
[2025-11-23 19:51:01] 2025-11-24 00:51:01,662 [wrapper] pandaids: 6895340545
[2025-11-23 19:51:01] 2025-11-24 00:51:01,700 [wrapper] cleanup supervisor_pilot 3787575 3317126
[2025-11-23 19:51:01] 2025-11-24 00:51:01,703 [wrapper] Test setup, not cleaning
[2025-11-23 19:51:01] 2025-11-24 00:51:01,705 [wrapper] apfmon messages muted
[2025-11-23 19:51:01] 2025-11-24 00:51:01,707 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:51:01] 2025-11-24 00:51:01,709 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:51:01]  *** Error codes and diagnostics ***
[2025-11-23 19:51:01]     "exeErrorCode": 0,
[2025-11-23 19:51:01]     "exeErrorDiag": "",
[2025-11-23 19:51:01]     "pilotErrorCode": 0,
[2025-11-23 19:51:01]     "pilotErrorDiag": "",
[2025-11-23 19:51:01]  *** Listing of results directory ***
[2025-11-23 19:51:01] total 1320656
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 08:39 pilot3.tar.gz
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 08:49 queuedata.json
[2025-11-23 19:51:01] -rwx------. 1 boincer umatlas     36292 Nov 22 08:51 runpilot2-wrapper.sh
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas       100 Nov 23 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:51:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 11:00 run_atlas
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas       105 Nov 23 11:00 job.xml
[2025-11-23 19:51:01] -rw-r--r--. 2 boincer umatlas 409404631 Nov 23 11:00 EVNT.47483658._000390.pool.root.1
[2025-11-23 19:51:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 11:00 start_atlas.sh
[2025-11-23 19:51:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 11:00 shared
[2025-11-23 19:51:01] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 11:00 input.tar.gz
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas         0 Nov 23 11:00 boinc_lockfile
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 11:00 pandaJob.out
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas    989785 Nov 23 11:01 agis_schedconf.cvmfs.json
[2025-11-23 19:51:01] drwx------. 5 boincer umatlas      4096 Nov 23 11:01 pilot3
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas       533 Nov 23 19:41 boinc_task_state.xml
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas      6530 Nov 23 19:47 init_data.xml
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas 926102725 Nov 23 19:49 HITS.47556137._003857.pool.root.1
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas      1047 Nov 23 19:49 memory_monitor_summary.json
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas   1526164 Nov 23 19:49 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas   1925571 Nov 23 19:49 log.47556137._003857.job.log.tgz.1
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas      8620 Nov 23 19:49 heartbeat.json
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas        95 Nov 23 19:50 pilot_heartbeat.json
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 19:50 boinc_mmap_file
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas        29 Nov 23 19:51 wrapper_checkpoint.txt
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas      4823 Nov 23 19:51 pilotlog.txt
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas   4533967 Nov 23 19:51 log.47556137._003857.job.log.1
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas       353 Nov 23 19:51 output.list
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas       620 Nov 23 19:51 runtime_log
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas   6481920 Nov 23 19:51 result.tar.gz
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas       659 Nov 23 19:51 WUcNDmWC3g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOCKKDmMTaJin.diag
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas      8818 Nov 23 19:51 runtime_log.err
[2025-11-23 19:51:01] -rw-r--r--. 1 boincer umatlas     21345 Nov 23 19:51 stderr.txt
[2025-11-23 19:51:01] HITS file was successfully produced:
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas 926102725 Nov 23 19:49 shared/HITS.pool.root.1
[2025-11-23 19:51:01]  *** Contents of shared directory: ***
[2025-11-23 19:51:01] total 1311144
[2025-11-23 19:51:01] -rw-r--r--. 2 boincer umatlas 409404631 Nov 23 11:00 ATLAS.root_0
[2025-11-23 19:51:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 11:00 start_atlas.sh
[2025-11-23 19:51:01] -rw-r--r--. 2 boincer umatlas    590101 Nov 23 11:00 input.tar.gz
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas 926102725 Nov 23 19:49 HITS.pool.root.1
[2025-11-23 19:51:01] -rw-------. 1 boincer umatlas   6481920 Nov 23 19:51 result.tar.gz
19:51:03 (3313412): run_atlas exited; CPU time 280204.548860
19:51:03 (3313412): called boinc_finish(0)

</stderr_txt>
]]>

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