Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:43:36 (1246840): wrapper (7.7.26015): starting
03:43:36 (1246840): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 03:43:36] Arguments: --nthreads 12
[2025-11-24 03:43:36] Threads: 12
[2025-11-24 03:43:36] Checking for CVMFS
[2025-11-24 03:43:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 03:43:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 03:43:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 03:43:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 03:43:36] 2.13.3.0 13543 3557 83912 153229 1 81 3695560 4097024 1044 130560 0 2768293 99.889 430088 18296 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-24 03:43:36] CVMFS is ok
[2025-11-24 03:43:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 03:43:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 03:43:36] Further information can be found at the LHC@home message board.
[2025-11-24 03:43:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 03:43:36] Checking for apptainer binary...
[2025-11-24 03:43:36] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-24 03:43:36] apptainer is not installed, using version from CVMFS
[2025-11-24 03:43:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 03:43:36] pckelar5.cern.ch
[2025-11-24 03:43:36] apptainer works
[2025-11-24 03:43:36] Set ATHENA_PROC_NUMBER=12
[2025-11-24 03:43:36] Set ATHENA_CORE_NUMBER=12
[2025-11-24 03:43:36] Starting ATLAS job with PandaID=6893847136
[2025-11-24 03:43:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:53:05]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:53:05] 2025-11-24 14:52:05,461 | INFO     | fitting pss+swap vs Time
[2025-11-24 15:53:05] 2025-11-24 14:52:05,462 | INFO     | sum of square deviations: 113819180276.6424
[2025-11-24 15:53:05] 2025-11-24 14:52:05,479 | INFO     | sum of deviations: 1416602765770.956
[2025-11-24 15:53:05] 2025-11-24 14:52:05,479 | INFO     | mean x: 1763974066.4776537
[2025-11-24 15:53:05] 2025-11-24 14:52:05,479 | INFO     | mean y: 3579453.5907821227
[2025-11-24 15:53:05] 2025-11-24 14:52:05,479 | INFO     | intersect: -21950985104.39427
[2025-11-24 15:53:05] 2025-11-24 14:52:05,480 | INFO     | chi2: 6.316234117746067
[2025-11-24 15:53:05] 2025-11-24 14:52:05,482 | INFO     | sum of square deviations: 111451516816.82977
[2025-11-24 15:53:05] 2025-11-24 14:52:05,498 | INFO     | sum of deviations: 1681503392775.9976
[2025-11-24 15:53:05] 2025-11-24 14:52:05,499 | INFO     | mean x: 1763973913.9845288
[2025-11-24 15:53:05] 2025-11-24 14:52:05,499 | INFO     | mean y: 3596505.0
[2025-11-24 15:53:05] 2025-11-24 14:52:05,499 | INFO     | intersect: -26610021737.703358
[2025-11-24 15:53:05] 2025-11-24 14:52:05,500 | INFO     | chi2: 3.6798209731853966
[2025-11-24 15:53:05] 2025-11-24 14:52:05,500 | INFO     | current chi2=3.6798209731853966 (change=41.740269524738075 %)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,501 | INFO     | sum of square deviations: 109116923744.44919
[2025-11-24 15:53:05] 2025-11-24 14:52:05,518 | INFO     | sum of deviations: 1833051273955.3118
[2025-11-24 15:53:05] 2025-11-24 14:52:05,518 | INFO     | mean x: 1763973761.4915013
[2025-11-24 15:53:05] 2025-11-24 14:52:05,518 | INFO     | mean y: 3606392.468838527
[2025-11-24 15:53:05] 2025-11-24 14:52:05,519 | INFO     | intersect: -29629325326.70664
[2025-11-24 15:53:05] 2025-11-24 14:52:05,520 | INFO     | chi2: 2.643416699790939
[2025-11-24 15:53:05] 2025-11-24 14:52:05,520 | INFO     | current chi2=2.643416699790939 (change=28.164529767797518 %)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,521 | INFO     | sum of square deviations: 106814996480.96428
[2025-11-24 15:53:05] 2025-11-24 14:52:05,537 | INFO     | sum of deviations: 1810521330742.687
[2025-11-24 15:53:05] 2025-11-24 14:52:05,537 | INFO     | mean x: 1763973608.9928672
[2025-11-24 15:53:05] 2025-11-24 14:52:05,538 | INFO     | mean y: 3604896.937232525
[2025-11-24 15:53:05] 2025-11-24 14:52:05,538 | INFO     | intersect: -29895865693.95404
[2025-11-24 15:53:05] 2025-11-24 14:52:05,539 | INFO     | chi2: 2.6309926145593354
[2025-11-24 15:53:05] 2025-11-24 14:52:05,539 | INFO     | current chi2=2.6309926145593354 (change=0.47000101166745123 %)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,539 | INFO     | right removable region: 700
[2025-11-24 15:53:05] 2025-11-24 14:52:05,540 | INFO     | sum of square deviations: 111451133249.79732
[2025-11-24 15:53:05] 2025-11-24 14:52:05,557 | INFO     | sum of deviations: 1159871765935.19
[2025-11-24 15:53:05] 2025-11-24 14:52:05,557 | INFO     | mean x: 1763974218.9831223
[2025-11-24 15:53:05] 2025-11-24 14:52:05,557 | INFO     | mean y: 3595961.599156118
[2025-11-24 15:53:05] 2025-11-24 14:52:05,558 | INFO     | intersect: -18354080921.330364
[2025-11-24 15:53:05] 2025-11-24 14:52:05,559 | INFO     | chi2: 3.9460871937684283
[2025-11-24 15:53:05] 2025-11-24 14:52:05,559 | INFO     | current chi2=3.9460871937684283 (change=37.52468448435885 %)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,560 | INFO     | sum of square deviations: 109116330342.2961
[2025-11-24 15:53:05] 2025-11-24 14:52:05,577 | INFO     | sum of deviations: 1087011079342.3204
[2025-11-24 15:53:05] 2025-11-24 14:52:05,577 | INFO     | mean x: 1763974371.483003
[2025-11-24 15:53:05] 2025-11-24 14:52:05,577 | INFO     | mean y: 3600718.943342776
[2025-11-24 15:53:05] 2025-11-24 14:52:05,577 | INFO     | intersect: -17569018149.95457
[2025-11-24 15:53:05] 2025-11-24 14:52:05,578 | INFO     | chi2: 3.8684506114059936
[2025-11-24 15:53:05] 2025-11-24 14:52:05,579 | INFO     | current chi2=3.8684506114059936 (change=1.9674320041644464 %)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,579 | INFO     | left removable region: 20
[2025-11-24 15:53:05] 2025-11-24 14:52:05,580 | INFO     | sum of square deviations: 97499899427.99944
[2025-11-24 15:53:05] 2025-11-24 14:52:05,595 | INFO     | sum of deviations: 1386325930577.0771
[2025-11-24 15:53:05] 2025-11-24 14:52:05,596 | INFO     | mean x: 1763974188.4985294
[2025-11-24 15:53:05] 2025-11-24 14:52:05,596 | INFO     | mean y: 3632908.0764705883
[2025-11-24 15:53:05] 2025-11-24 14:52:05,596 | INFO     | intersect: -25077861254.797512
[2025-11-24 15:53:05] 2025-11-24 14:52:05,597 | INFO     | chi2: 0.14177304683049136
[2025-11-24 15:53:05] 2025-11-24 14:52:05,597 | INFO     | current memory leak: 14.22 B/s (using 680 data points, chi2=0.14)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,598 | INFO     | could have reported an average CPU frequency of 2801 MHz (27 samples)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,598 | INFO     | ..............................
[2025-11-24 15:53:05] 2025-11-24 14:52:05,599 | INFO     | . Timing measurements:
[2025-11-24 15:53:05] 2025-11-24 14:52:05,599 | INFO     | . get job = 0 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,599 | INFO     | . initial setup = 1 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,599 | INFO     | . payload setup = 8 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,599 | INFO     | . stage-in = 0 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,599 | INFO     | . payload execution = 43658 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,599 | INFO     | . stage-out = 2 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,600 | INFO     | . log creation = 0 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,600 | INFO     | ..............................
[2025-11-24 15:53:05] 2025-11-24 14:52:05,983 | INFO     | 
[2025-11-24 15:53:05] 2025-11-24 14:52:05,984 | INFO     | job summary report
[2025-11-24 15:53:05] 2025-11-24 14:52:05,984 | INFO     | --------------------------------------------------
[2025-11-24 15:53:05] 2025-11-24 14:52:05,984 | INFO     | PanDA job id: 6893847136
[2025-11-24 15:53:05] 2025-11-24 14:52:05,984 | INFO     | task id: 47523449
[2025-11-24 15:53:05] 2025-11-24 14:52:05,984 | INFO     | errors: (none)
[2025-11-24 15:53:05] 2025-11-24 14:52:05,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 15:53:05] 2025-11-24 14:52:05,984 | INFO     | pilot state: finished 
[2025-11-24 15:53:05] 2025-11-24 14:52:05,985 | INFO     | transexitcode: 0
[2025-11-24 15:53:05] 2025-11-24 14:52:05,985 | INFO     | exeerrorcode: 0
[2025-11-24 15:53:05] 2025-11-24 14:52:05,985 | INFO     | exeerrordiag: 
[2025-11-24 15:53:05] 2025-11-24 14:52:05,985 | INFO     | exitcode: 0
[2025-11-24 15:53:05] 2025-11-24 14:52:05,985 | INFO     | exitmsg: OK
[2025-11-24 15:53:05] 2025-11-24 14:52:05,985 | INFO     | cpuconsumptiontime: 508607 s
[2025-11-24 15:53:05] 2025-11-24 14:52:05,986 | INFO     | nevents: 1000
[2025-11-24 15:53:05] 2025-11-24 14:52:05,986 | INFO     | neventsw: 0
[2025-11-24 15:53:05] 2025-11-24 14:52:05,986 | INFO     | pid: 1258202
[2025-11-24 15:53:05] 2025-11-24 14:52:05,986 | INFO     | pgrp: 1258202
[2025-11-24 15:53:05] 2025-11-24 14:52:05,986 | INFO     | corecount: 12
[2025-11-24 15:53:05] 2025-11-24 14:52:05,986 | INFO     | event service: False
[2025-11-24 15:53:05] 2025-11-24 14:52:05,987 | INFO     | sizes: {0: 2298580, 1: 2298835, 2: 2298835, 6: 2299125, 12: 2299153, 43670: 2344195, 43674: 2353980, 43675: 2354036, 43681: 2354282}
[2025-11-24 15:53:05] 2025-11-24 14:52:05,987 | INFO     | --------------------------------------------------
[2025-11-24 15:53:05] 2025-11-24 14:52:05,987 | INFO     | 
[2025-11-24 15:53:05] 2025-11-24 14:52:05,987 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 15:53:05] 2025-11-24 14:52:06,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,010 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 15:53:05] 2025-11-24 14:52:06,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,011 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 15:53:05] 2025-11-24 14:52:06,011 | INFO     | job 6893847136 has completed (purged errors)
[2025-11-24 15:53:05] 2025-11-24 14:52:06,011 | INFO     | overall cleanup function is called
[2025-11-24 15:53:05] 2025-11-24 14:52:07,034 | INFO     | --- collectZombieJob: --- 10, [1258202]
[2025-11-24 15:53:05] 2025-11-24 14:52:07,034 | INFO     | zombie collector waiting for pid 1258202
[2025-11-24 15:53:05] 2025-11-24 14:52:07,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 15:53:05] 2025-11-24 14:52:07,035 | INFO     | collected zombie processes
[2025-11-24 15:53:05] 2025-11-24 14:52:07,035 | INFO     | will attempt to kill all subprocesses of pid=1258202
[2025-11-24 15:53:05] 2025-11-24 14:52:07,233 | INFO     | process IDs to be killed: [1258202] (in reverse order)
[2025-11-24 15:53:05] 2025-11-24 14:52:07,297 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 15:53:05] 2025-11-24 14:52:07,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 15:53:05] 2025-11-24 14:52:07,304 | INFO     | did not find any defunct processes belonging to 1258202
[2025-11-24 15:53:05] 2025-11-24 14:52:07,311 | INFO     | did not find any defunct processes belonging to 1258202
[2025-11-24 15:53:05] 2025-11-24 14:52:07,313 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 15:53:05] 2025-11-24 14:52:07,313 | INFO     | ready for new job
[2025-11-24 15:53:05] 2025-11-24 14:52:07,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 15:53:05] 2025-11-24 14:52:07,316 | INFO     | ***************************************
[2025-11-24 15:53:05] 2025-11-24 14:52:07,317 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 15:53:05] 2025-11-24 14:52:07,317 | INFO     | ***************************************
[2025-11-24 15:53:05] 2025-11-24 14:52:07,317 | INFO     | 
[2025-11-24 15:53:05] 2025-11-24 14:52:07,319 | INFO     | architecture information:
[2025-11-24 15:53:05] 2025-11-24 14:52:07,319 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:53:05] 2025-11-24 14:52:07,332 | INFO     | cat /etc/os-release:
[2025-11-24 15:53:05] NAME="CentOS Linux"
[2025-11-24 15:53:05] VERSION="7 (Core)"
[2025-11-24 15:53:05] ID="centos"
[2025-11-24 15:53:05] ID_LIKE="rhel fedora"
[2025-11-24 15:53:05] VERSION_ID="7"
[2025-11-24 15:53:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:53:05] ANSI_COLOR="0;31"
[2025-11-24 15:53:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:53:05] HOME_URL="https://www.centos.org/"
[2025-11-24 15:53:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:53:05] 
[2025-11-24 15:53:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:53:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:53:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:53:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:53:05] 
[2025-11-24 15:53:05] 2025-11-24 14:52:07,332 | INFO     | ***************************************
[2025-11-24 15:53:05] 2025-11-24 14:52:07,834 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 15:53:05] 2025-11-24 14:52:07,852 | INFO     | sufficient remaining disk space (1813544697856 B)
[2025-11-24 15:53:05] 2025-11-24 14:52:07,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:53:05] 2025-11-24 14:52:07,853 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:53:05] 2025-11-24 14:52:07,853 | INFO     | update_server=False
[2025-11-24 15:53:05] 2025-11-24 14:52:07,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:53:05] 2025-11-24 14:52:08,196 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 15:53:05] 2025-11-24 14:52:08,196 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 15:53:05] 2025-11-24 14:52:08,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:53:05] 2025-11-24 14:52:08,196 | INFO     | will abort loop
[2025-11-24 15:53:05] 2025-11-24 14:52:08,231 | INFO     | all job control threads have been joined
[2025-11-24 15:53:05] 2025-11-24 14:52:08,859 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:08,912 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:08,925 | INFO     | all payload control threads have been joined
[2025-11-24 15:53:05] 2025-11-24 14:52:08,925 | INFO     | all data control threads have been joined
[2025-11-24 15:53:05] 2025-11-24 14:52:09,080 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,123 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,202 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,237 | INFO     | [job] control thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:53:05] 2025-11-24 14:52:09,299 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,371 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,490 | INFO     | [job] validate thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,930 | INFO     | [data] control thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:09,930 | INFO     | [payload] control thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:10,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:53:05] 2025-11-24 14:52:10,195 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:10,274 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:10,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:53:05] 2025-11-24 14:52:11,287 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:11,770 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:14,142 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:53:05] 2025-11-24 14:52:38,009 | INFO     | PID=1250680 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 15:53:05] 2025-11-24 14:52:38,009 | INFO     | .. there are 2 such processes running
[2025-11-24 15:53:05] 2025-11-24 14:52:38,009 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:53:05] 2025-11-24 14:52:38,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:53:05] 2025-11-24 14:52:38,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:53:05] 2025-11-24 14:53:00,195 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:53:05] 2025-11-24 14:53:00,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473858279232)>', '<ExcThread(monitor, started 140473305900800)>']
[2025-11-24 15:53:05] 2025-11-24 14:53:01,119 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:53:05] 2025-11-24 14:53:01,120 | INFO     | [monitor] control thread has ended
[2025-11-24 15:53:05] 2025-11-24 14:53:05,681 | INFO     | all workflow threads have been joined
[2025-11-24 15:53:05] 2025-11-24 14:53:05,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:53:05] 2025-11-24 14:53:05,682 | INFO     | traces error code: 0
[2025-11-24 15:53:05] 2025-11-24 14:53:05,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:53:05] 2025-11-24 14:53:05,796 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:53:05] 2025-11-24 14:53:05,799 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:53:05] 2025-11-24 14:53:05,802 [wrapper] pilotpid: 1250680
[2025-11-24 15:53:05] 2025-11-24 14:53:05,804 [wrapper] Pilot exit status: 0
[2025-11-24 15:53:05] 2025-11-24 14:53:05,815 [wrapper] pandaids: 6893847136
[2025-11-24 15:53:05] 2025-11-24 14:53:05,856 [wrapper] cleanup supervisor_pilot 1495667 1250681
[2025-11-24 15:53:05] 2025-11-24 14:53:05,859 [wrapper] Test setup, not cleaning
[2025-11-24 15:53:05] 2025-11-24 14:53:05,862 [wrapper] apfmon messages muted
[2025-11-24 15:53:05] 2025-11-24 14:53:05,864 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:53:05] 2025-11-24 14:53:05,867 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:53:05]  *** Error codes and diagnostics ***
[2025-11-24 15:53:05]     "exeErrorCode": 0,
[2025-11-24 15:53:05]     "exeErrorDiag": "",
[2025-11-24 15:53:05]     "pilotErrorCode": 0,
[2025-11-24 15:53:05]     "pilotErrorDiag": "",
[2025-11-24 15:53:05]  *** Listing of results directory ***
[2025-11-24 15:53:05] total 1330172
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 15:53:05] -rwx------ 1 boinc boinc     36292 Nov 20 11:20 runpilot2-wrapper.sh
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc       100 Nov 24 03:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:53:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 03:43 run_atlas
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc       105 Nov 24 03:43 job.xml
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc      6296 Nov 24 03:43 init_data.xml
[2025-11-24 15:53:05] -rw-r--r-- 2 boinc boinc 412891510 Nov 24 03:43 EVNT.47493127._000231.pool.root.1
[2025-11-24 15:53:05] -rw-r--r-- 2 boinc boinc     15847 Nov 24 03:43 start_atlas.sh
[2025-11-24 15:53:05] drwxrwx--x 2 boinc boinc        68 Nov 24 03:43 shared
[2025-11-24 15:53:05] -rw-r--r-- 2 boinc boinc    590100 Nov 24 03:43 input.tar.gz
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc         0 Nov 24 03:43 boinc_lockfile
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc      2786 Nov 24 03:43 pandaJob.out
[2025-11-24 15:53:05] -rw------- 1 boinc boinc    989786 Nov 24 03:43 agis_schedconf.cvmfs.json
[2025-11-24 15:53:05] drwx------ 5 boinc boinc      4096 Nov 24 03:43 pilot3
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc       533 Nov 24 15:40 boinc_task_state.xml
[2025-11-24 15:53:05] -rw------- 1 boinc boinc 928321228 Nov 24 15:51 HITS.47523449._002307.pool.root.1
[2025-11-24 15:53:05] -rw------- 1 boinc boinc        95 Nov 24 15:51 pilot_heartbeat.json
[2025-11-24 15:53:05] -rw------- 1 boinc boinc      1034 Nov 24 15:51 memory_monitor_summary.json
[2025-11-24 15:53:05] -rw------- 1 boinc boinc   1516227 Nov 24 15:51 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:53:05] -rw------- 1 boinc boinc   2413529 Nov 24 15:51 log.47523449._002307.job.log.tgz.1
[2025-11-24 15:53:05] -rw------- 1 boinc boinc      8610 Nov 24 15:52 heartbeat.json
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc      8192 Nov 24 15:52 boinc_mmap_file
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc        29 Nov 24 15:52 wrapper_checkpoint.txt
[2025-11-24 15:53:05] -rw------- 1 boinc boinc      5011 Nov 24 15:53 pilotlog.txt
[2025-11-24 15:53:05] -rw------- 1 boinc boinc   6077073 Nov 24 15:53 log.47523449._002307.job.log.1
[2025-11-24 15:53:05] -rw------- 1 boinc boinc       353 Nov 24 15:53 output.list
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc       620 Nov 24 15:53 runtime_log
[2025-11-24 15:53:05] -rw------- 1 boinc boinc   8509440 Nov 24 15:53 result.tar.gz
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc      8842 Nov 24 15:53 runtime_log.err
[2025-11-24 15:53:05] -rw------- 1 boinc boinc       665 Nov 24 15:53 MygMDmswGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuNHKDmY0Ctan.diag
[2025-11-24 15:53:05] -rw-r--r-- 1 boinc boinc     21263 Nov 24 15:53 stderr.txt
[2025-11-24 15:53:05] HITS file was successfully produced:
[2025-11-24 15:53:05] -rw------- 1 boinc boinc 928321228 Nov 24 15:51 shared/HITS.pool.root.1
[2025-11-24 15:53:05]  *** Contents of shared directory: ***
[2025-11-24 15:53:05] total 1318688
[2025-11-24 15:53:05] -rw-r--r-- 2 boinc boinc 412891510 Nov 24 03:43 ATLAS.root_0
[2025-11-24 15:53:05] -rw-r--r-- 2 boinc boinc     15847 Nov 24 03:43 start_atlas.sh
[2025-11-24 15:53:05] -rw-r--r-- 2 boinc boinc    590100 Nov 24 03:43 input.tar.gz
[2025-11-24 15:53:05] -rw------- 1 boinc boinc 928321228 Nov 24 15:51 HITS.pool.root.1
[2025-11-24 15:53:05] -rw------- 1 boinc boinc   8509440 Nov 24 15:53 result.tar.gz
15:53:07 (1246840): run_atlas exited; CPU time 508674.827601
15:53:07 (1246840): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN