Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:25:07 (1364933): wrapper (7.7.26015): starting
08:25:07 (1364933): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 08:25:07] Arguments: --nthreads 3
[2025-11-26 08:25:07] Threads: 3
[2025-11-26 08:25:07] Checking for CVMFS
[2025-11-26 08:25:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:25:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:25:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:25:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:25:07] 2.9.2.0 3958803 10861 93708 153314 0 81 33717435 36864001 0 130560 1 4016609 99.928 553454 754 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 08:25:07] CVMFS is ok
[2025-11-26 08:25:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:25:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:25:07] Further information can be found at the LHC@home message board.
[2025-11-26 08:25:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:25:07] Checking for apptainer binary...
[2025-11-26 08:25:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:25:07] Running /usr/bin/apptainer --version
[2025-11-26 08:25:07] apptainer version 1.4.1-1.1
[2025-11-26 08:25:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:25:07] atlasA223b
[2025-11-26 08:25:07] apptainer works
[2025-11-26 08:25:07] Set ATHENA_PROC_NUMBER=3
[2025-11-26 08:25:07] Set ATHENA_CORE_NUMBER=3
[2025-11-26 08:25:07] Starting ATLAS job with PandaID=6895333400
[2025-11-26 08:25:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:46:57]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:46:57] 2025-11-26 15:45:50,332 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:46:57] 2025-11-26 15:45:50,342 | INFO     | cat /etc/os-release:
[2025-11-26 16:46:57] NAME="CentOS Linux"
[2025-11-26 16:46:57] VERSION="7 (Core)"
[2025-11-26 16:46:57] ID="centos"
[2025-11-26 16:46:57] ID_LIKE="rhel fedora"
[2025-11-26 16:46:57] VERSION_ID="7"
[2025-11-26 16:46:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:46:57] ANSI_COLOR="0;31"
[2025-11-26 16:46:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:46:57] HOME_URL="https://www.centos.org/"
[2025-11-26 16:46:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:46:57] 
[2025-11-26 16:46:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:46:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:46:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:46:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:46:57] 
[2025-11-26 16:46:57] 2025-11-26 15:45:50,342 | INFO     | ***************************************
[2025-11-26 16:46:57] 2025-11-26 15:45:50,844 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | INFO     | sufficient remaining disk space (368537763840 B)
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | INFO     | update_server=False
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:46:57] 2025-11-26 15:45:50,854 | INFO     | aborting loop
[2025-11-26 16:46:57] 2025-11-26 15:45:50,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:46:57] 2025-11-26 15:45:51,013 | INFO     | all data control threads have been joined
[2025-11-26 16:46:57] 2025-11-26 15:45:51,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:46:57] 2025-11-26 15:45:51,859 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:51,860 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:51,860 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:52,018 | INFO     | [data] control thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:52,033 | INFO     | all payload control threads have been joined
[2025-11-26 16:46:57] 2025-11-26 15:45:52,241 | INFO     | all job control threads have been joined
[2025-11-26 16:46:57] 2025-11-26 15:45:52,478 | INFO     | [job] validate thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:52,598 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:52,712 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:52,724 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:52,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:52,802 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:53,002 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:53,014 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:53,039 | INFO     | [payload] control thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:53,247 | INFO     | [job] control thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:53,436 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:45:55,801 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:46:57] 2025-11-26 15:46:20,593 | INFO     | PID=1368655 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:46:57] 2025-11-26 15:46:20,594 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:46:57] 2025-11-26 15:46:20,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:46:57] 2025-11-26 15:46:20,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:46:57] 2025-11-26 15:46:50,790 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:46:57] 2025-11-26 15:46:52,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847034402624)>', '<ExcThread(monitor, started 139846366500608)>']
[2025-11-26 16:46:57] 2025-11-26 15:46:53,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:46:57] 2025-11-26 15:46:53,757 | INFO     | [monitor] control thread has ended
[2025-11-26 16:46:57] 2025-11-26 15:46:57,825 | INFO     | all workflow threads have been joined
[2025-11-26 16:46:57] 2025-11-26 15:46:57,825 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:46:57] 2025-11-26 15:46:57,825 | INFO     | traces error code: 0
[2025-11-26 16:46:57] 2025-11-26 15:46:57,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:46:57] 2025-11-26 15:46:57,873 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:46:57] 2025-11-26 15:46:57,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:46:57] 2025-11-26 15:46:57,878 [wrapper] pilotpid: 1368655
[2025-11-26 16:46:57] 2025-11-26 15:46:57,881 [wrapper] Pilot exit status: 0
[2025-11-26 16:46:57] 2025-11-26 15:46:57,888 [wrapper] pandaids: 6895333400
[2025-11-26 16:46:57] 2025-11-26 15:46:57,910 [wrapper] cleanup supervisor_pilot 1441130 1368656
[2025-11-26 16:46:57] 2025-11-26 15:46:57,912 [wrapper] Test setup, not cleaning
[2025-11-26 16:46:57] 2025-11-26 15:46:57,915 [wrapper] apfmon messages muted
[2025-11-26 16:46:57] 2025-11-26 15:46:57,917 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:46:57] 2025-11-26 15:46:57,920 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:46:57]  *** Error codes and diagnostics ***
[2025-11-26 16:46:57]     "exeErrorCode": 0,
[2025-11-26 16:46:57]     "exeErrorDiag": "",
[2025-11-26 16:46:57]     "pilotErrorCode": 0,
[2025-11-26 16:46:57]     "pilotErrorDiag": "",
[2025-11-26 16:46:57]  *** Listing of results directory ***
[2025-11-26 16:46:57] total 1309992
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc    576529 Nov 22 02:38 pilot3.tar.gz
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc      5112 Nov 22 02:44 queuedata.json
[2025-11-26 16:46:57] -rwx------ 1 boinc boinc     36292 Nov 22 02:45 runpilot2-wrapper.sh
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc       100 Nov 26 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:46:57] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 08:25 run_atlas
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc       105 Nov 26 08:25 job.xml
[2025-11-26 16:46:57] -rw-r--r-- 2 boinc boinc 410594431 Nov 26 08:25 EVNT.47483658._000204.pool.root.1
[2025-11-26 16:46:57] -rw-r--r-- 2 boinc boinc    590099 Nov 26 08:25 input.tar.gz
[2025-11-26 16:46:57] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:25 start_atlas.sh
[2025-11-26 16:46:57] drwxrwx--x 2 boinc boinc      4096 Nov 26 08:25 shared
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:25 boinc_setup_complete
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc      6450 Nov 26 08:25 init_data.xml
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:25 boinc_lockfile
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc      2786 Nov 26 08:25 pandaJob.out
[2025-11-26 16:46:57] -rw------- 1 boinc boinc    991877 Nov 26 08:25 agis_schedconf.cvmfs.json
[2025-11-26 16:46:57] drwx------ 5 boinc boinc      4096 Nov 26 08:25 pilot3
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc       531 Nov 26 16:38 boinc_task_state.xml
[2025-11-26 16:46:57] -rw------- 1 boinc boinc 916120072 Nov 26 16:44 HITS.47556137._002013.pool.root.1
[2025-11-26 16:46:57] -rw------- 1 boinc boinc      1020 Nov 26 16:45 memory_monitor_summary.json
[2025-11-26 16:46:57] -rw------- 1 boinc boinc   1516240 Nov 26 16:45 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:46:57] -rw------- 1 boinc boinc   1183651 Nov 26 16:45 log.47556137._002013.job.log.tgz.1
[2025-11-26 16:46:57] -rw------- 1 boinc boinc      8564 Nov 26 16:45 heartbeat.json
[2025-11-26 16:46:57] -rw------- 1 boinc boinc        95 Nov 26 16:46 pilot_heartbeat.json
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc      8192 Nov 26 16:46 boinc_mmap_file
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc        28 Nov 26 16:46 wrapper_checkpoint.txt
[2025-11-26 16:46:57] -rw------- 1 boinc boinc      4752 Nov 26 16:46 pilotlog.txt
[2025-11-26 16:46:57] -rw------- 1 boinc boinc   4220508 Nov 26 16:46 log.47556137._002013.job.log.1
[2025-11-26 16:46:57] -rw------- 1 boinc boinc       353 Nov 26 16:46 output.list
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc       620 Nov 26 16:46 runtime_log
[2025-11-26 16:46:57] -rw------- 1 boinc boinc   5427200 Nov 26 16:46 result.tar.gz
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc      8918 Nov 26 16:46 runtime_log.err
[2025-11-26 16:46:57] -rw------- 1 boinc boinc       669 Nov 26 16:46 QALODmwrrg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTqJKDmIVJOxm.diag
[2025-11-26 16:46:57] -rw-r--r-- 1 boinc boinc      8889 Nov 26 16:46 stderr.txt
[2025-11-26 16:46:57] HITS file was successfully produced:
[2025-11-26 16:46:57] -rw------- 1 boinc boinc 916120072 Nov 26 16:44 shared/HITS.pool.root.1
[2025-11-26 16:46:57]  *** Contents of shared directory: ***
[2025-11-26 16:46:57] total 1301528
[2025-11-26 16:46:57] -rw-r--r-- 2 boinc boinc 410594431 Nov 26 08:25 ATLAS.root_0
[2025-11-26 16:46:57] -rw-r--r-- 2 boinc boinc    590099 Nov 26 08:25 input.tar.gz
[2025-11-26 16:46:57] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:25 start_atlas.sh
[2025-11-26 16:46:57] -rw------- 1 boinc boinc 916120072 Nov 26 16:44 HITS.pool.root.1
[2025-11-26 16:46:57] -rw------- 1 boinc boinc   5427200 Nov 26 16:46 result.tar.gz
16:46:59 (1364933): run_atlas exited; CPU time 87987.920180
16:46:59 (1364933): called boinc_finish(0)

</stderr_txt>
]]>

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