Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-23 13:15:24 (19632): vboxwrapper version 26210
2025-11-23 13:15:24 (19632): BOINC client version: 8.0.2
2025-11-23 13:15:25 (19632): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-11-23 13:15:25 (19632): Successfully copied 'init_data.xml' to the shared directory.
2025-11-23 13:15:25 (19632): Create VM. (boinc_3032c27f9ec334b7, slot#11)
2025-11-23 13:15:26 (19632): Setting Memory Size for VM. (4800MB)
2025-11-23 13:15:26 (19632): Setting CPU Count for VM. (8)
2025-11-23 13:15:26 (19632): Setting Chipset Options for VM.
2025-11-23 13:15:27 (19632): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-23 13:15:27 (19632): Setting Boot Options for VM.
2025-11-23 13:15:27 (19632): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-23 13:15:28 (19632): Enabling VM Network Access.
2025-11-23 13:15:28 (19632): Disabling USB Support for VM.
2025-11-23 13:15:28 (19632): Disabling COM Port Support for VM.
2025-11-23 13:15:28 (19632): Disabling LPT Port Support for VM.
2025-11-23 13:15:29 (19632): Disabling Audio Support for VM.
2025-11-23 13:15:29 (19632): Disabling Clipboard Support for VM.
2025-11-23 13:15:29 (19632): Disabling Drag and Drop Support for VM.
2025-11-23 13:15:29 (19632): Adding storage controller(s) to VM.
2025-11-23 13:15:30 (19632): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-23 13:15:32 (19632): Adding VirtualBox Guest Additions to VM.
2025-11-23 13:15:32 (19632): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-23 13:15:32 (19632): forwarding host port 54477 to guest port 80
2025-11-23 13:15:33 (19632): Enabling remote desktop for VM.
2025-11-23 13:15:33 (19632): Required extension pack not installed, remote desktop not enabled.
2025-11-23 13:15:33 (19632): Enabling shared directory for VM.
2025-11-23 13:15:33 (19632): Starting VM using VBoxManage interface. (boinc_3032c27f9ec334b7, slot#11)
2025-11-23 13:15:38 (19632): Successfully started VM. (PID = '11108')
2025-11-23 13:15:38 (19632): Reporting VM Process ID to BOINC.
2025-11-23 13:15:38 (19632): Guest Log: BIOS: VirtualBox 7.2.2
2025-11-23 13:15:38 (19632): Guest Log: CPUID EDX: 0x178bfbff
2025-11-23 13:15:38 (19632): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-23 13:15:38 (19632): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-23 13:15:38 (19632): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-23 13:15:38 (19632): Detected: Web Application Enabled (http://localhost:54477)
2025-11-23 13:15:38 (19632): Preference change detected
2025-11-23 13:15:38 (19632): Setting CPU throttle for VM. (100%)
2025-11-23 13:15:39 (19632): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 23 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 13:15:40 (19632): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-23 13:15:40 (19632): Guest Log: BIOS: Booting from Hard Disk...
2025-11-23 13:15:42 (19632): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-23 13:15:42 (19632): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-23 13:15:42 (19632): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-23 13:15:48 (19632): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-23 13:15:48 (19632): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-23 13:15:52 (19632): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000108 main     Log opened 2025-11-23T13:15:50.579601000Z
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000212 main     OS Product: Linux
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000246 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000261 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000261 main     Process ID: 1371
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000261 main     Package type: LINUX_64BITS_GENERIC
2025-11-23 13:15:52 (19632): Guest Log: 00:00:00.000828 main     5.2.32 r132073 started. Verbose level = 0
2025-11-23 13:15:53 (19632): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-23 13:15:53 (19632): Guest Log: [INFO] Mounting shared directory
2025-11-23 13:15:53 (19632): Guest Log: [INFO] Checking for init_data.xml
2025-11-23 13:15:56 (19632): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-23 13:15:56 (19632): Guest Log: [INFO] Detected branch: prod
2025-11-23 13:15:57 (19632): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-23 13:15:57 (19632): Guest Log: Copying input files
2025-11-23 13:15:59 (19632): Guest Log: Copied input files into RunAtlas.
2025-11-23 13:15:59 (19632): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-23 13:15:59 (19632): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-23 13:15:59 (19632): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-23 13:15:59 (19632): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 13:16:02 (19632): Guest Log: 00:00:10.005242 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 798 718 000ns (GuestNow=1 763 896 562 782 443 000 ns GuestLast=1 763 903 750 581 161 000 ns fSetTimeLastLoop=true )
2025-11-23 13:16:51 (19632): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 13:16:51 (19632): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 13:16:51 (19632): Guest Log: 2.6.3.0 1647 0 32228 153207 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 13:16:51 (19632): Guest Log: copied the webapp to /var/www
2025-11-23 13:16:51 (19632): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-23 13:16:51 (19632): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-23 13:16:52 (19632): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 13:16:52 (19632): Guest Log:  *** Starting ATLAS job. (PandaID=6895340343 taskID=47556137) ***
2025-11-23 14:55:46 (19632): Status Report: Elapsed Time: '6000.000000'
2025-11-23 14:55:46 (19632): Status Report: CPU Time: '43736.515625'
2025-11-23 15:07:43 (19632): VM state change detected. (old = 'running', new = 'paused')
2025-11-23 16:21:35 (19632): VM state change detected. (old = 'paused', new = 'running')
2025-11-23 16:21:37 (19632): Guest Log: 01:51:52.223312 timesync vgsvcTimeSyncWorker: Radical host time change: 4 437 170 000 000ns (HostNow=1 763 907 669 238 000 000 ns HostLast=1 763 903 232 068 000 000 ns)
2025-11-23 16:21:47 (19632): Guest Log: 01:52:02.225213 timesync vgsvcTimeSyncWorker: Radical guest time change: 4 414 239 411 000ns (GuestNow=1 763 907 679 239 688 000 ns GuestLast=1 763 903 265 000 277 000 ns fSetTimeLastLoop=true )
2025-11-23 17:49:44 (19632): Status Report: Elapsed Time: '12000.000000'
2025-11-23 17:49:44 (19632): Status Report: CPU Time: '90265.828125'
2025-11-23 19:29:44 (19632): Status Report: Elapsed Time: '18000.000000'
2025-11-23 19:29:44 (19632): Status Report: CPU Time: '137664.281250'
2025-11-23 21:09:56 (19632): Status Report: Elapsed Time: '24000.156580'
2025-11-23 21:09:56 (19632): Status Report: CPU Time: '182948.656250'
2025-11-23 21:14:48 (19632): Guest Log:  *** Job finished ***
2025-11-23 21:14:48 (19632): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:17,215 | INFO     | PID=6099 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:17,215 | INFO     | found 0 job(s) in 20 queues
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:17,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:17,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:17,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:17,216 | INFO     | [monitor] control thread has ended
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,482 | INFO     | all workflow threads have been joined
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,482 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,483 | INFO     | traces error code: 0
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,643 [wrapper] ==== pilot stdout END ====
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,652 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,662 [wrapper] pilotpid: 6099
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,671 [wrapper] Pilot exit status: 0
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,701 [wrapper] pandaids: 6895340343
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,738 [wrapper] cleanup supervisor_pilot 32219 6100
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,745 [wrapper] Test setup, not cleaning
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,752 [wrapper] apfmon messages muted
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,757 [wrapper] ==== wrapper stdout END ====
2025-11-23 21:14:48 (19632): Guest Log: 2025-11-23 19:14:18,761 [wrapper] ==== wrapper stderr END ====
2025-11-23 21:14:48 (19632): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 21:14:48 (19632): Guest Log:     "exeErrorCode": 0,
2025-11-23 21:14:48 (19632): Guest Log:     "exeErrorDiag": "",
2025-11-23 21:14:48 (19632): Guest Log:     "pilotErrorCode": 0,
2025-11-23 21:14:48 (19632): Guest Log:     "pilotErrorDiag": "",
2025-11-23 21:14:48 (19632): Guest Log:  *** Listing of results directory ***
2025-11-23 21:14:48 (19632): Guest Log: total 900956
2025-11-23 21:14:48 (19632): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 22 12:54 pilot3.tar.gz
2025-11-23 21:14:48 (19632): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 22 13:03 runpilot2-wrapper.sh
2025-11-23 21:14:48 (19632): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 22 13:03 queuedata.json
2025-11-23 21:14:48 (19632): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 23 11:15 start_atlas.sh
2025-11-23 21:14:48 (19632): Guest Log: -rwxr-xr-x. 1 atlas atlas    590102 Nov 23 11:15 input.tar.gz
2025-11-23 21:14:48 (19632): Guest Log: -rwxr-xr-x. 1 atlas atlas      9173 Nov 23 11:15 init_data.xml
2025-11-23 21:14:48 (19632): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 11:15 EVNT.47483658._000379.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 21:14:48 (19632): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 23 11:16 pandaJob.out
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 23 11:17 agis_schedconf.cvmfs.json
2025-11-23 21:14:48 (19632): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 11:17 pilot3
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas 908825313 Nov 23 19:12 HITS.47556137._003758.pool.root.1
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas      1039 Nov 23 19:13 memory_monitor_summary.json
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 19:13 agis_ddmendpoints.agis.ALL.json
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas   1726654 Nov 23 19:13 log.47556137._003758.job.log.tgz.1
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas        97 Nov 23 19:13 pilot_heartbeat.json
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas      8632 Nov 23 19:13 heartbeat.json
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas      4993 Nov 23 19:14 pilotlog.txt
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas   3224911 Nov 23 19:14 log.47556137._003758.job.log.1
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 19:14 output.list
2025-11-23 21:14:48 (19632): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 19:14 runtime_log
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas   4966400 Nov 23 19:14 result.tar.gz
2025-11-23 21:14:48 (19632): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Nov 23 19:14 runtime_log.err
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas       665 Nov 23 19:14 FL7KDmXS2g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1AKKDm9UqUVm.diag
2025-11-23 21:14:48 (19632): Guest Log: Looking for outputfile HITS.47556137._003758.pool.root.1
2025-11-23 21:14:48 (19632): Guest Log: HITS file was successfully produced
2025-11-23 21:14:48 (19632): Guest Log: -rw-------. 1 atlas atlas 908825313 Nov 23 19:12 /home/atlas/RunAtlas/HITS.47556137._003758.pool.root.1
2025-11-23 21:14:58 (19632): Guest Log: Successfully finished the ATLAS job!
2025-11-23 21:14:58 (19632): Guest Log: Copying the results back to the shared directory!
2025-11-23 21:14:58 (19632): Guest Log:  *** Contents of shared directory: ***
2025-11-23 21:14:58 (19632): Guest Log: total 1291144
2025-11-23 21:14:58 (19632): Guest Log: -rwxrwxrwx. 1 root root 407708839 Nov 23 11:15 ATLAS.root_0
2025-11-23 21:14:58 (19632): Guest Log: -rwxrwxrwx. 1 root root 908825313 Nov 23  2025 HITS.pool.root.1
2025-11-23 21:14:58 (19632): Guest Log: -rwxrwxrwx. 1 root root      9173 Nov 23 11:15 init_data.xml
2025-11-23 21:14:58 (19632): Guest Log: -rwxrwxrwx. 1 root root    590102 Nov 23 11:14 input.tar.gz
2025-11-23 21:14:58 (19632): Guest Log: -rwxrwxrwx. 1 root root   4966400 Nov 23  2025 result.tar.gz
2025-11-23 21:14:58 (19632): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 23 11:14 start_atlas.sh
2025-11-23 21:14:58 (19632): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 21:14:58 (19632): VM Completion File Detected.
2025-11-23 21:14:58 (19632): Powering off VM.
2025-11-23 21:15:00 (19632): Successfully stopped VM.
2025-11-23 21:15:00 (19632): Deregistering VM. (boinc_3032c27f9ec334b7, slot#11)
2025-11-23 21:15:00 (19632): Removing network bandwidth throttle group from VM.
2025-11-23 21:15:00 (19632): Removing VM from VirtualBox.
2025-11-23 21:15:06 (19632): called boinc_finish(0)

</stderr_txt>
]]>

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