Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-23 22:55:05 (1976): vboxwrapper version 26210
2025-11-23 22:55:05 (1976): BOINC client version: 8.0.2
2025-11-23 22:55:06 (1976): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-11-23 22:55:06 (1976): Successfully copied 'init_data.xml' to the shared directory.
2025-11-23 22:55:06 (1976): Create VM. (boinc_efd1b41b0af887fb, slot#30)
2025-11-23 22:55:07 (1976): Setting Memory Size for VM. (4800MB)
2025-11-23 22:55:07 (1976): Setting CPU Count for VM. (8)
2025-11-23 22:55:07 (1976): Setting Chipset Options for VM.
2025-11-23 22:55:08 (1976): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-23 22:55:08 (1976): Setting Boot Options for VM.
2025-11-23 22:55:08 (1976): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-23 22:55:09 (1976): Enabling VM Network Access.
2025-11-23 22:55:09 (1976): Disabling USB Support for VM.
2025-11-23 22:55:09 (1976): Disabling COM Port Support for VM.
2025-11-23 22:55:09 (1976): Disabling LPT Port Support for VM.
2025-11-23 22:55:10 (1976): Disabling Audio Support for VM.
2025-11-23 22:55:10 (1976): Disabling Clipboard Support for VM.
2025-11-23 22:55:10 (1976): Disabling Drag and Drop Support for VM.
2025-11-23 22:55:10 (1976): Adding storage controller(s) to VM.
2025-11-23 22:55:11 (1976): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-23 22:55:11 (1976): Adding VirtualBox Guest Additions to VM.
2025-11-23 22:55:12 (1976): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-23 22:55:12 (1976): forwarding host port 57201 to guest port 80
2025-11-23 22:55:12 (1976): Enabling remote desktop for VM.
2025-11-23 22:55:12 (1976): Required extension pack not installed, remote desktop not enabled.
2025-11-23 22:55:12 (1976): Enabling shared directory for VM.
2025-11-23 22:55:13 (1976): Starting VM using VBoxManage interface. (boinc_efd1b41b0af887fb, slot#30)
2025-11-23 22:55:21 (1976): Successfully started VM. (PID = '7384')
2025-11-23 22:55:21 (1976): Reporting VM Process ID to BOINC.
2025-11-23 22:55:21 (1976): Guest Log: BIOS: VirtualBox 7.2.2
2025-11-23 22:55:21 (1976): Guest Log: CPUID EDX: 0x178bfbff
2025-11-23 22:55:21 (1976): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-23 22:55:21 (1976): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-23 22:55:21 (1976): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-23 22:55:21 (1976): Detected: Web Application Enabled (http://localhost:57201)
2025-11-23 22:55:21 (1976): Preference change detected
2025-11-23 22:55:21 (1976): Setting CPU throttle for VM. (100%)
2025-11-23 22:55:21 (1976): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 23 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 22:55:23 (1976): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-23 22:55:23 (1976): Guest Log: BIOS: Booting from Hard Disk...
2025-11-23 22:55:26 (1976): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-23 22:55:26 (1976): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-23 22:55:26 (1976): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-23 22:55:32 (1976): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-23 22:55:32 (1976): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-23 22:55:40 (1976): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.000399 main     Log opened 2025-11-23T22:55:38.402037000Z
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.000665 main     OS Product: Linux
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.000696 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.000723 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.000750 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.000750 main     Process ID: 1372
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.000750 main     Package type: LINUX_64BITS_GENERIC
2025-11-23 22:55:40 (1976): Guest Log: 00:00:00.001931 main     5.2.32 r132073 started. Verbose level = 0
2025-11-23 22:55:40 (1976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-23 22:55:40 (1976): Guest Log: [INFO] Mounting shared directory
2025-11-23 22:55:40 (1976): Guest Log: [INFO] Checking for init_data.xml
2025-11-23 22:55:45 (1976): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-23 22:55:45 (1976): Guest Log: [INFO] Detected branch: prod
2025-11-23 22:55:45 (1976): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-23 22:55:45 (1976): Guest Log: Copying input files
2025-11-23 22:55:49 (1976): Guest Log: Copied input files into RunAtlas.
2025-11-23 22:55:49 (1976): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-23 22:55:49 (1976): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-23 22:55:49 (1976): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-23 22:55:49 (1976): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 22:55:50 (1976): Guest Log: 00:00:10.007762 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 087 220 000ns (GuestNow=1 763 931 349 319 532 000 ns GuestLast=1 763 938 538 406 752 000 ns fSetTimeLastLoop=true )
2025-11-23 22:55:58 (1976): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 22:55:58 (1976): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 22:55:58 (1976): Guest Log: 2.6.3.0 1651 0 32016 153220 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 22:56:00 (1976): Guest Log: copied the webapp to /var/www
2025-11-23 22:56:00 (1976): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-23 22:56:00 (1976): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-23 22:56:01 (1976): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 22:56:01 (1976): Guest Log:  *** Starting ATLAS job. (PandaID=6895340348 taskID=47556137) ***
2025-11-24 00:35:27 (1976): Status Report: Elapsed Time: '6000.000000'
2025-11-24 00:35:27 (1976): Status Report: CPU Time: '43494.281250'
2025-11-24 01:03:36 (1976): VM state change detected. (old = 'running', new = 'paused')
2025-11-24 04:09:22 (1976): VM state change detected. (old = 'paused', new = 'running')
2025-11-24 04:09:23 (1976): Guest Log: 02:07:54.174026 timesync vgsvcTimeSyncWorker: Radical host time change: 11 154 050 000 000ns (HostNow=1 763 950 134 624 000 000 ns HostLast=1 763 938 980 574 000 000 ns)
2025-11-24 04:09:33 (1976): Guest Log: 02:08:04.174854 timesync vgsvcTimeSyncWorker: Radical guest time change: 11 131 158 286 000ns (GuestNow=1 763 950 144 634 480 000 ns GuestLast=1 763 939 013 476 194 000 ns fSetTimeLastLoop=true )
2025-11-24 05:21:46 (1976): Status Report: Elapsed Time: '12000.049252'
2025-11-24 05:21:46 (1976): Status Report: CPU Time: '91254.687500'
2025-11-24 07:02:31 (1976): Status Report: Elapsed Time: '18000.855742'
2025-11-24 07:02:31 (1976): Status Report: CPU Time: '139137.812500'
2025-11-24 08:22:52 (1976): Guest Log:  *** Job finished ***
2025-11-24 08:22:52 (1976): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:11,762 | INFO     | end of generic workflow (traces error code: 0)
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:11,763 | INFO     | traces error code: 0
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:11,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:21,779 | INFO     | PID=6087 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:21,782 | INFO     | found 0 job(s) in 20 queues
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:21,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:21,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:21,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:21,782 | CRITICAL | thread 'MainThread' is not alive
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:21,782 | INFO     | [monitor] control thread has ended
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,091 [wrapper] ==== pilot stdout END ====
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,102 [wrapper] ==== wrapper stdout RESUME ====
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,113 [wrapper] pilotpid: 6087
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,123 [wrapper] Pilot exit status: 0
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,156 [wrapper] pandaids: 6895340348
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,208 [wrapper] cleanup supervisor_pilot 29638 6088
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,218 [wrapper] Test setup, not cleaning
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,229 [wrapper] apfmon messages muted
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,239 [wrapper] ==== wrapper stdout END ====
2025-11-24 08:22:52 (1976): Guest Log: 2025-11-24 06:22:22,247 [wrapper] ==== wrapper stderr END ====
2025-11-24 08:22:52 (1976): Guest Log:  *** Error codes and diagnostics ***
2025-11-24 08:22:52 (1976): Guest Log:     "exeErrorCode": 0,
2025-11-24 08:22:52 (1976): Guest Log:     "exeErrorDiag": "",
2025-11-24 08:22:52 (1976): Guest Log:     "pilotErrorCode": 0,
2025-11-24 08:22:52 (1976): Guest Log:     "pilotErrorDiag": "",
2025-11-24 08:22:52 (1976): Guest Log:  *** Listing of results directory ***
2025-11-24 08:22:52 (1976): Guest Log: total 906864
2025-11-24 08:22:52 (1976): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 22 12:54 pilot3.tar.gz
2025-11-24 08:22:52 (1976): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 22 13:03 queuedata.json
2025-11-24 08:22:52 (1976): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 22 13:04 runpilot2-wrapper.sh
2025-11-24 08:22:52 (1976): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 23 20:55 start_atlas.sh
2025-11-24 08:22:52 (1976): Guest Log: -rwxr-xr-x. 1 atlas atlas    590106 Nov 23 20:55 input.tar.gz
2025-11-24 08:22:52 (1976): Guest Log: -rwxr-xr-x. 1 atlas atlas      9173 Nov 23 20:55 init_data.xml
2025-11-24 08:22:52 (1976): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 20:55 EVNT.47483658._000380.pool.root.1 -> /data/./ATLAS.root_0
2025-11-24 08:22:52 (1976): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 23 20:56 pandaJob.out
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas    989786 Nov 23 20:57 agis_schedconf.cvmfs.json
2025-11-24 08:22:52 (1976): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 20:57 pilot3
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas 915303167 Nov 24 06:20 HITS.47556137._003763.pool.root.1
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas      1039 Nov 24 06:21 memory_monitor_summary.json
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 24 06:21 agis_ddmendpoints.agis.ALL.json
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas   1720279 Nov 24 06:21 log.47556137._003763.job.log.tgz.1
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas      8646 Nov 24 06:21 heartbeat.json
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas        98 Nov 24 06:22 pilot_heartbeat.json
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas       814 Nov 24 06:22 pilotlog.txt
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas   3016917 Nov 24 06:22 log.47556137._003763.job.log.1
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas       353 Nov 24 06:22 output.list
2025-11-24 08:22:52 (1976): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 24 06:22 runtime_log
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas   4761600 Nov 24 06:22 result.tar.gz
2025-11-24 08:22:52 (1976): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Nov 24 06:22 runtime_log.err
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas       665 Nov 24 06:22 57bMDmWT2g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmO7HKDm8vy1Ao.diag
2025-11-24 08:22:52 (1976): Guest Log: Looking for outputfile HITS.47556137._003763.pool.root.1
2025-11-24 08:22:52 (1976): Guest Log: HITS file was successfully produced
2025-11-24 08:22:52 (1976): Guest Log: -rw-------. 1 atlas atlas 915303167 Nov 24 06:20 /home/atlas/RunAtlas/HITS.47556137._003763.pool.root.1
2025-11-24 08:22:59 (1976): Guest Log: Successfully finished the ATLAS job!
2025-11-24 08:22:59 (1976): Guest Log: Copying the results back to the shared directory!
2025-11-24 08:22:59 (1976): Guest Log:  *** Contents of shared directory: ***
2025-11-24 08:22:59 (1976): Guest Log: total 1299168
2025-11-24 08:22:59 (1976): Guest Log: -rwxrwxrwx. 1 root root 409655454 Nov 23 20:55 ATLAS.root_0
2025-11-24 08:22:59 (1976): Guest Log: -rwxrwxrwx. 1 root root 915303167 Nov 24  2025 HITS.pool.root.1
2025-11-24 08:22:59 (1976): Guest Log: -rwxrwxrwx. 1 root root      9173 Nov 23 20:55 init_data.xml
2025-11-24 08:22:59 (1976): Guest Log: -rwxrwxrwx. 1 root root    590106 Nov 23 11:15 input.tar.gz
2025-11-24 08:22:59 (1976): Guest Log: -rwxrwxrwx. 1 root root   4761600 Nov 24  2025 result.tar.gz
2025-11-24 08:22:59 (1976): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 23 11:15 start_atlas.sh
2025-11-24 08:22:59 (1976): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-24 08:22:59 (1976): VM Completion File Detected.
2025-11-24 08:22:59 (1976): Powering off VM.
2025-11-24 08:23:01 (1976): Successfully stopped VM.
2025-11-24 08:23:01 (1976): Deregistering VM. (boinc_efd1b41b0af887fb, slot#30)
2025-11-24 08:23:01 (1976): Removing network bandwidth throttle group from VM.
2025-11-24 08:23:01 (1976): Removing VM from VirtualBox.
2025-11-24 08:23:07 (1976): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN