Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:34 (2283225): wrapper (7.7.26015): starting
03:10:34 (2283225): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 03:10:34] Arguments: --nthreads 12
[2025-11-23 03:10:34] Threads: 12
[2025-11-23 03:10:34] Checking for CVMFS
[2025-11-23 03:10:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 03:10:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 03:10:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 03:10:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 03:10:37] 2.11.5.0 1589369 23912 310476 153205 3 460 30403877 45568001 18017 130560 0 242652501 99.804 133166932 27463 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-23 03:10:37] CVMFS is ok
[2025-11-23 03:10:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 03:10:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 03:10:37] Further information can be found at the LHC@home message board.
[2025-11-23 03:10:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:10:37] Checking for apptainer binary...
[2025-11-23 03:10:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 03:10:37] Running /usr/bin/apptainer --version
[2025-11-23 03:10:37] apptainer version 1.4.1-1.el9
[2025-11-23 03:10:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:10:37] wns0055.triumf.lcg
[2025-11-23 03:10:37] apptainer works
[2025-11-23 03:10:37] Set ATHENA_PROC_NUMBER=12
[2025-11-23 03:10:37] Set ATHENA_CORE_NUMBER=12
[2025-11-23 03:10:37] Starting ATLAS job with PandaID=6895351221
[2025-11-23 03:10:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:19:27]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:19:27] 2025-11-23 11:18:34,309 | WARNING  | wrong length of table data, x=[1763896363.0, 1763896424.0, 1763896485.0, 1763896546.0], y=[1655.0, 649068.0, 242813.0, 666959.0] (must be same and length>=4)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | ..............................
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . Timing measurements:
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . get job = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . initial setup = 4 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . payload setup = 19 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . stage-in = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . payload execution = 228 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . stage-out = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . log creation = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | ..............................
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895351221/pilotlog.txt
[2025-11-23 03:19:27] 2025-11-23 11:18:34,323 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 03:19:27] - Log from pilotlog.txt -
[2025-11-23 03:19:27] 2025-11-23 11:18:34,307 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895351221/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,308 | INFO     | extracted standard info from prmon json
[2025-11-23 03:19:27] 2025-11-23 11:18:34,308 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:19:27] 2025-11-23 11:18:34,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:19:27] 2025-11-23 11:18:34,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 03:19:27] 2025-11-23 11:18:34,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 03:19:27] 2025-11-23 11:18:34,309 | WARNING  | wrong length of table data, x=[1763896363.0, 1763896424.0, 1763896485.0, 1763896546.0], y=[1655.0, 649068.0, 242813.0, 666959.0] (must be same and length>=4)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | ..............................
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . Timing measurements:
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . get job = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . initial setup = 4 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . payload setup = 19 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . stage-in = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . payload execution = 228 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . stage-out = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . log creation = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | ..............................
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895351221/pilotlog.txt
[2025-11-23 03:19:27] 2025-11-23 11:18:34,324 | WARNING  | 
[2025-11-23 03:19:27] [begin log extracts]
[2025-11-23 03:19:27] - Log from pilotlog.txt -
[2025-11-23 03:19:27] 2025-11-23 11:18:34,307 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895351221/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,308 | INFO     | extracted standard info from prmon json
[2025-11-23 03:19:27] 2025-11-23 11:18:34,308 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:19:27] 2025-11-23 11:18:34,308 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:19:27] 2025-11-23 11:18:34,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 03:19:27] 2025-11-23 11:18:34,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 03:19:27] 2025-11-23 11:18:34,309 | WARNING  | wrong length of table data, x=[1763896363.0, 1763896424.0, 1763896485.0, 1763896546.0], y=[1655.0, 649068.0, 242813.0, 666959.0] (must be same and length>=4)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | ..............................
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . Timing measurements:
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . get job = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . initial setup = 4 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . payload setup = 19 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . stage-in = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . payload execution = 228 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . stage-out = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | . log creation = 0 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | ..............................
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 03:19:27] 2025-11-23 11:18:34,310 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895351221/pilotlog.txt
[2025-11-23 03:19:27] [end log extracts]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,324 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,324 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | 
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | job summary report
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | --------------------------------------------------
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | PanDA job id: 6895351221
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | task id: 47556149
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 03:16:05,199 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | pilot state: failed 
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | transexitcode: 65
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | exeerrorcode: 65
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | exitcode: 65
[2025-11-23 03:19:27] 2025-11-23 11:18:34,379 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-23 03:19:27] 2025-11-23 11:18:34,380 | INFO     | cpuconsumptiontime: 50 s
[2025-11-23 03:19:27] 2025-11-23 11:18:34,380 | INFO     | nevents: 0
[2025-11-23 03:19:27] 2025-11-23 11:18:34,380 | INFO     | neventsw: 0
[2025-11-23 03:19:27] 2025-11-23 11:18:34,380 | INFO     | pid: 2299188
[2025-11-23 03:19:27] 2025-11-23 11:18:34,380 | INFO     | pgrp: 2299188
[2025-11-23 03:19:27] 2025-11-23 11:18:34,381 | INFO     | corecount: 12
[2025-11-23 03:19:27] 2025-11-23 11:18:34,381 | INFO     | event service: False
[2025-11-23 03:19:27] 2025-11-23 11:18:34,381 | INFO     | sizes: {0: 2298531, 1: 2298730, 12: 2298730, 15: 2299020, 23: 2299048, 251: 2324657, 253: 2328947, 255: 2328975, 392: 2329141}
[2025-11-23 03:19:27] 2025-11-23 11:18:34,381 | INFO     | --------------------------------------------------
[2025-11-23 03:19:27] 2025-11-23 11:18:34,381 | INFO     | 
[2025-11-23 03:19:27] 2025-11-23 11:18:34,381 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 03:19:27] 2025-11-23 11:18:34,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:19:27] 2025-11-23 11:18:34,401 | INFO     | job 6895351221 has completed (purged errors)
[2025-11-23 03:19:27] 2025-11-23 11:18:34,401 | INFO     | overall cleanup function is called
[2025-11-23 03:19:27] 2025-11-23 11:18:35,418 | INFO     | --- collectZombieJob: --- 10, [2299188]
[2025-11-23 03:19:27] 2025-11-23 11:18:35,418 | INFO     | zombie collector waiting for pid 2299188
[2025-11-23 03:19:27] 2025-11-23 11:18:35,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:19:27] 2025-11-23 11:18:35,418 | INFO     | collected zombie processes
[2025-11-23 03:19:27] 2025-11-23 11:18:35,419 | INFO     | will attempt to kill all subprocesses of pid=2299188
[2025-11-23 03:19:27] 2025-11-23 11:18:35,917 | INFO     | PID=2292257 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 03:19:27] 2025-11-23 11:18:35,917 | INFO     | .. there are 28 such processes running
[2025-11-23 03:19:27] 2025-11-23 11:18:36,005 | INFO     | process IDs to be killed: [2299188] (in reverse order)
[2025-11-23 03:19:27] 2025-11-23 11:18:36,082 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:19:27] 2025-11-23 11:18:36,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:19:27] 2025-11-23 11:18:36,090 | INFO     | did not find any defunct processes belonging to 2299188
[2025-11-23 03:19:27] 2025-11-23 11:18:36,097 | INFO     | did not find any defunct processes belonging to 2299188
[2025-11-23 03:19:27] 2025-11-23 11:18:36,098 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:19:27] 2025-11-23 11:18:36,098 | INFO     | ready for new job
[2025-11-23 03:19:27] 2025-11-23 11:18:36,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:19:27] 2025-11-23 11:18:36,099 | INFO     | ***************************************
[2025-11-23 03:19:27] 2025-11-23 11:18:36,099 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:19:27] 2025-11-23 11:18:36,099 | INFO     | ***************************************
[2025-11-23 03:19:27] 2025-11-23 11:18:36,099 | INFO     | 
[2025-11-23 03:19:27] 2025-11-23 11:18:36,101 | INFO     | architecture information:
[2025-11-23 03:19:27] 2025-11-23 11:18:36,102 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:19:27] 2025-11-23 11:18:36,114 | INFO     | cat /etc/os-release:
[2025-11-23 03:19:27] NAME="CentOS Linux"
[2025-11-23 03:19:27] VERSION="7 (Core)"
[2025-11-23 03:19:27] ID="centos"
[2025-11-23 03:19:27] ID_LIKE="rhel fedora"
[2025-11-23 03:19:27] VERSION_ID="7"
[2025-11-23 03:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:19:27] ANSI_COLOR="0;31"
[2025-11-23 03:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:19:27] HOME_URL="https://www.centos.org/"
[2025-11-23 03:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:19:27] 
[2025-11-23 03:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:19:27] 
[2025-11-23 03:19:27] 2025-11-23 11:18:36,115 | INFO     | ***************************************
[2025-11-23 03:19:27] 2025-11-23 11:18:36,618 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 03:19:27] 2025-11-23 11:18:36,706 | INFO     | sufficient remaining disk space (1588242415616 B)
[2025-11-23 03:19:27] 2025-11-23 11:18:36,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:19:27] 2025-11-23 11:18:36,706 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:19:27] 2025-11-23 11:18:36,706 | INFO     | update_server=False
[2025-11-23 03:19:27] 2025-11-23 11:18:36,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:19:27] 2025-11-23 11:18:36,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:19:27] 2025-11-23 11:18:36,707 | INFO     | aborting loop
[2025-11-23 03:19:27] 2025-11-23 11:18:36,708 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 03:19:27] 2025-11-23 11:18:36,708 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:19:27] 2025-11-23 11:18:36,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:19:27] 2025-11-23 11:18:36,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:19:27] 2025-11-23 11:18:37,019 | INFO     | all payload control threads have been joined
[2025-11-23 03:19:27] 2025-11-23 11:18:37,416 | INFO     | all data control threads have been joined
[2025-11-23 03:19:27] 2025-11-23 11:18:37,712 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:37,713 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:37,727 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:38,012 | INFO     | all job control threads have been joined
[2025-11-23 03:19:27] 2025-11-23 11:18:38,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:38,025 | INFO     | [payload] control thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:38,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:19:27] 2025-11-23 11:18:38,184 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:38,190 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:38,422 | INFO     | [data] control thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:38,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:19:27] 2025-11-23 11:18:38,637 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:38,911 | INFO     | [job] validate thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:39,018 | INFO     | [job] control thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:39,058 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:39,077 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:39,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:19:27] 2025-11-23 11:18:40,142 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:40,432 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:18:42,532 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:19:27] 2025-11-23 11:19:21,438 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:19:27] 2025-11-23 11:19:21,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139942270555968)>', '<ExcThread(monitor, started 139941879199488)>']
[2025-11-23 03:19:27] 2025-11-23 11:19:21,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:19:27] 2025-11-23 11:19:21,984 | INFO     | [monitor] control thread has ended
[2025-11-23 03:19:27] 2025-11-23 11:19:26,745 | INFO     | all workflow threads have been joined
[2025-11-23 03:19:27] 2025-11-23 11:19:26,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:19:27] 2025-11-23 11:19:26,746 | INFO     | traces error code: 0
[2025-11-23 03:19:27] 2025-11-23 11:19:26,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:19:27] 2025-11-23 11:19:26,940 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:19:27] 2025-11-23 11:19:26,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:19:27] 2025-11-23 11:19:26,972 [wrapper] pilotpid: 2292257
[2025-11-23 03:19:27] 2025-11-23 11:19:26,997 [wrapper] Pilot exit status: 0
[2025-11-23 03:19:27] 2025-11-23 11:19:27,113 [wrapper] pandaids: 6895351221
[2025-11-23 03:19:27] 2025-11-23 11:19:27,160 [wrapper] cleanup supervisor_pilot 2292267 2292258
[2025-11-23 03:19:27] 2025-11-23 11:19:27,163 [wrapper] Test setup, not cleaning
[2025-11-23 03:19:27] 2025-11-23 11:19:27,166 [wrapper] apfmon messages muted
[2025-11-23 03:19:27] 2025-11-23 11:19:27,168 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:19:27] 2025-11-23 11:19:27,170 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:19:27]  *** Error codes and diagnostics ***
[2025-11-23 03:19:27]     "exeErrorCode": 65,
[2025-11-23 03:19:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-23 03:19:27]     "pilotErrorCode": 1305,
[2025-11-23 03:19:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-23 03:19:27]  *** Listing of results directory ***
[2025-11-23 03:19:27] total 404228
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc    576529 Nov 22 15:34 pilot3.tar.gz
[2025-11-23 03:19:27] -rwx------. 1 boinc boinc     36292 Nov 22 15:41 runpilot2-wrapper.sh
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc      5112 Nov 22 15:41 queuedata.json
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc       100 Nov 23 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:19:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 03:10 run_atlas
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc       105 Nov 23 03:10 job.xml
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc      6594 Nov 23 03:10 init_data.xml
[2025-11-23 03:19:27] -rw-r--r--. 2 boinc boinc 409665514 Nov 23 03:10 EVNT.47483658._001123.pool.root.1
[2025-11-23 03:19:27] -rw-r--r--. 2 boinc boinc     15847 Nov 23 03:10 start_atlas.sh
[2025-11-23 03:19:27] drwxrwx--x. 2 boinc boinc      4096 Nov 23 03:10 shared
[2025-11-23 03:19:27] -rw-r--r--. 2 boinc boinc    590100 Nov 23 03:10 input.tar.gz
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc         0 Nov 23 03:10 boinc_lockfile
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc      2784 Nov 23 03:10 pandaJob.out
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc    989784 Nov 23 03:11 agis_schedconf.cvmfs.json
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc   1526164 Nov 23 03:11 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:19:27] drwx------. 5 boinc boinc      4096 Nov 23 03:11 pilot3
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc       524 Nov 23 03:16 boinc_task_state.xml
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc      1002 Nov 23 03:16 memory_monitor_summary.json
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc     51673 Nov 23 03:16 log.47556149._001098.job.log.tgz.1
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc        95 Nov 23 03:18 pilot_heartbeat.json
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc     10340 Nov 23 03:18 heartbeat.json
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc        23 Nov 23 03:19 wrapper_checkpoint.txt
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc      8192 Nov 23 03:19 boinc_mmap_file
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc      4551 Nov 23 03:19 pilotlog.txt
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc    120054 Nov 23 03:19 log.47556149._001098.job.log.1
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc       186 Nov 23 03:19 output.list
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc       620 Nov 23 03:19 runtime_log
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc    194560 Nov 23 03:19 result.tar.gz
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc      8636 Nov 23 03:19 runtime_log.err
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc       647 Nov 23 03:19 DMVKDmKPCh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWSKKDm7VFIin.diag
[2025-11-23 03:19:27] -rw-r--r--. 1 boinc boinc     22689 Nov 23 03:19 stderr.txt
[2025-11-23 03:19:27] No HITS result produced
[2025-11-23 03:19:27]  *** Contents of shared directory: ***
[2025-11-23 03:19:27] total 400856
[2025-11-23 03:19:27] -rw-r--r--. 2 boinc boinc 409665514 Nov 23 03:10 ATLAS.root_0
[2025-11-23 03:19:27] -rw-r--r--. 2 boinc boinc     15847 Nov 23 03:10 start_atlas.sh
[2025-11-23 03:19:27] -rw-r--r--. 2 boinc boinc    590100 Nov 23 03:10 input.tar.gz
[2025-11-23 03:19:27] -rw-------. 1 boinc boinc    194560 Nov 23 03:19 result.tar.gz
03:19:29 (2283225): run_atlas exited; CPU time 55.159595
03:19:29 (2283225): called boinc_finish(0)

</stderr_txt>
]]>

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