Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:56 (13206): wrapper (7.7.26015): starting
02:01:56 (13206): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 02:01:56] Arguments: --nthreads 8
[2025-11-26 02:01:56] Threads: 8
[2025-11-26 02:01:56] Checking for CVMFS
[2025-11-26 02:01:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:01:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:01:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:01:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:01:57] 2.11.2.0 25230 284531 142704 153303 2 284 16940291 25165824 1803 130560 12 123659031 99.847 89198090 2925 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 02:01:57] CVMFS is ok
[2025-11-26 02:01:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:01:57] Checking for apptainer binary...
[2025-11-26 02:01:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:01:57] Running /usr/bin/apptainer --version
[2025-11-26 02:01:57] apptainer version 1.3.2-1.el7
[2025-11-26 02:01:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:02:00] cg-vwn359.simple-grid.lan
[2025-11-26 02:02:00] apptainer works
[2025-11-26 02:02:00] Set ATHENA_PROC_NUMBER=8
[2025-11-26 02:02:00] Set ATHENA_CORE_NUMBER=8
[2025-11-26 02:02:00] Starting ATLAS job with PandaID=6895340053
[2025-11-26 02:02:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:47:16]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:47:16] 2025-11-27 00:46:31,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:47:16] 2025-11-27 00:46:31,289 | INFO     | time since job start (85439s) is within the limit (172800.0s)
[2025-11-27 01:47:16] 2025-11-27 00:46:33,296 | INFO     | time since job start (85441s) is within the limit (172800.0s)
[2025-11-27 01:47:16] 2025-11-27 00:46:33,599 | INFO     | monitor loop #5680: job 0:6895340053 is in state 'finished'
[2025-11-27 01:47:16] 2025-11-27 00:46:33,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:47:16] 2025-11-27 00:46:35,303 | INFO     | time since job start (85443s) is within the limit (172800.0s)
[2025-11-27 01:47:16] 2025-11-27 00:46:36,107 | INFO     | monitor loop #5681: job 0:6895340053 is in state 'finished'
[2025-11-27 01:47:16] 2025-11-27 00:46:36,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:47:16] 2025-11-27 00:46:36,504 | INFO     | PID=23254 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:47:16] 2025-11-27 00:46:36,504 | INFO     | .. there are 9 such processes running
[2025-11-27 01:47:16] 2025-11-27 00:46:37,507 | INFO     | time since job start (85445s) is within the limit (172800.0s)
[2025-11-27 01:47:16] 2025-11-27 00:46:38,613 | INFO     | monitor loop #5682: job 0:6895340053 is in state 'finished'
[2025-11-27 01:47:16] 2025-11-27 00:46:38,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:47:16] 2025-11-27 00:46:39,072 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:47:16] 2025-11-27 00:46:39,073 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 01:47:16] 2025-11-27 00:46:39,075 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6895340053/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:47:16] 2025-11-27 00:46:39,079 | INFO     | extracted standard info from prmon json
[2025-11-27 01:47:16] 2025-11-27 00:46:39,079 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:47:16] 2025-11-27 00:46:39,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:47:16] 2025-11-27 00:46:39,106 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:47:16] 2025-11-27 00:46:39,108 | INFO     | sum of square deviations: 849043756232.7341
[2025-11-27 01:47:16] 2025-11-27 00:46:39,171 | INFO     | sum of deviations: 2437033807094.538
[2025-11-27 01:47:16] 2025-11-27 00:46:39,171 | INFO     | mean x: 1764161643.0936384
[2025-11-27 01:47:16] 2025-11-27 00:46:39,171 | INFO     | mean y: 2854969.2401715512
[2025-11-27 01:47:16] 2025-11-27 00:46:39,171 | INFO     | intersect: -5060867051.960517
[2025-11-27 01:47:16] 2025-11-27 00:46:39,173 | INFO     | chi2: 13.970686846894228
[2025-11-27 01:47:16] 2025-11-27 00:46:39,175 | INFO     | sum of square deviations: 839973290009.2365
[2025-11-27 01:47:16] 2025-11-27 00:46:39,243 | INFO     | sum of deviations: 2905973138398.828
[2025-11-27 01:47:16] 2025-11-27 00:46:39,243 | INFO     | mean x: 1764161490.597561
[2025-11-27 01:47:16] 2025-11-27 00:46:39,243 | INFO     | mean y: 2862852.538020086
[2025-11-27 01:47:16] 2025-11-27 00:46:39,243 | INFO     | intersect: -6100433483.727358
[2025-11-27 01:47:16] 2025-11-27 00:46:39,245 | INFO     | chi2: 10.68783901618717
[2025-11-27 01:47:16] 2025-11-27 00:46:39,245 | INFO     | current chi2=10.68783901618717 (change=23.49811334749699 %)
[2025-11-27 01:47:16] 2025-11-27 00:46:39,245 | INFO     | right removable region: 1393
[2025-11-27 01:47:16] 2025-11-27 00:46:39,247 | INFO     | sum of square deviations: 839972356709.236
[2025-11-27 01:47:16] 2025-11-27 00:46:39,307 | INFO     | sum of deviations: 2013089721955.1003
[2025-11-27 01:47:16] 2025-11-27 00:46:39,307 | INFO     | mean x: 1764161795.597561
[2025-11-27 01:47:16] 2025-11-27 00:46:39,307 | INFO     | mean y: 2862091.969870875
[2025-11-27 01:47:16] 2025-11-27 00:46:39,307 | INFO     | intersect: -4225153211.4107127
[2025-11-27 01:47:16] 2025-11-27 00:46:39,309 | INFO     | chi2: 11.457538098992956
[2025-11-27 01:47:16] 2025-11-27 00:46:39,309 | INFO     | current chi2=11.457538098992956 (change=17.9887272218113 %)
[2025-11-27 01:47:16] 2025-11-27 00:46:39,309 | INFO     | left removable region: 10
[2025-11-27 01:47:16] 2025-11-27 00:46:39,311 | INFO     | sum of square deviations: 820244640080.214
[2025-11-27 01:47:16] 2025-11-27 00:46:39,610 | INFO     | time since job start (85447s) is within the limit (172800.0s)
[2025-11-27 01:47:16] 2025-11-27 00:46:39,611 | INFO     | 85449s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 01:47:16] 2025-11-27 00:46:39,619 | INFO     | sum of deviations: 2486885586697.862
[2025-11-27 01:47:16] 2025-11-27 00:46:39,620 | INFO     | mean x: 1764161765.1033983
[2025-11-27 01:47:16] 2025-11-27 00:46:39,620 | INFO     | mean y: 2873406.007953724
[2025-11-27 01:47:16] 2025-11-27 00:46:39,620 | INFO     | intersect: -5345858242.893839
[2025-11-27 01:47:16] 2025-11-27 00:46:39,622 | INFO     | chi2: 7.350695386138023
[2025-11-27 01:47:16] 2025-11-27 00:46:39,622 | INFO     | current memory leak: 3.03 B/s (using 1383 data points, chi2=7.35)
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | ..............................
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | . Timing measurements:
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | . get job = 0 s
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | . initial setup = 2 s
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | . payload setup = 11 s
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | . stage-in = 0 s
[2025-11-27 01:47:16] 2025-11-27 00:46:39,624 | INFO     | . payload execution = 85311 s
[2025-11-27 01:47:16] 2025-11-27 00:46:39,625 | INFO     | . stage-out = 4 s
[2025-11-27 01:47:16] 2025-11-27 00:46:39,625 | INFO     | . log creation = 1 s
[2025-11-27 01:47:16] 2025-11-27 00:46:39,625 | INFO     | ..............................
[2025-11-27 01:47:16] 2025-11-27 00:46:40,172 | INFO     | 
[2025-11-27 01:47:16] 2025-11-27 00:46:40,172 | INFO     | job summary report
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | --------------------------------------------------
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | PanDA job id: 6895340053
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | task id: 47556137
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | errors: (none)
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | pilot state: finished 
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | transexitcode: 0
[2025-11-27 01:47:16] 2025-11-27 00:46:40,173 | INFO     | exeerrorcode: 0
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | exeerrordiag: 
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | exitcode: 0
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | exitmsg: OK
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | cpuconsumptiontime: 323837 s
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | nevents: 1000
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | neventsw: 0
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | pid: 29788
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | pgrp: 29788
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | corecount: 8
[2025-11-27 01:47:16] 2025-11-27 00:46:40,174 | INFO     | event service: False
[2025-11-27 01:47:16] 2025-11-27 00:46:40,175 | INFO     | sizes: {0: 2284093, 1: 2284292, 10: 2284554, 12: 2284582, 85327: 2344112, 85328: 2344111, 85333: 2353319, 85335: 2353375, 85428: 2353621}
[2025-11-27 01:47:16] 2025-11-27 00:46:40,175 | INFO     | --------------------------------------------------
[2025-11-27 01:47:16] 2025-11-27 00:46:40,175 | INFO     | 
[2025-11-27 01:47:16] 2025-11-27 00:46:40,175 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-11-27 01:47:16] 2025-11-27 00:46:40,679 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,685 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,685 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:47:16] 2025-11-27 00:46:40,687 | INFO     | job 6895340053 has completed (purged errors)
[2025-11-27 01:47:16] 2025-11-27 00:46:40,688 | INFO     | overall cleanup function is called
[2025-11-27 01:47:16] 2025-11-27 00:46:41,704 | INFO     | --- collectZombieJob: --- 10, [29788]
[2025-11-27 01:47:16] 2025-11-27 00:46:41,705 | INFO     | zombie collector waiting for pid 29788
[2025-11-27 01:47:16] 2025-11-27 00:46:41,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:47:16] 2025-11-27 00:46:41,705 | INFO     | collected zombie processes
[2025-11-27 01:47:16] 2025-11-27 00:46:41,705 | INFO     | will attempt to kill all subprocesses of pid=29788
[2025-11-27 01:47:16] 2025-11-27 00:46:41,858 | INFO     | process IDs to be killed: [29788] (in reverse order)
[2025-11-27 01:47:16] 2025-11-27 00:46:42,720 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:47:16] 2025-11-27 00:46:42,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:47:16] 2025-11-27 00:46:42,723 | INFO     | did not find any defunct processes belonging to 29788
[2025-11-27 01:47:16] 2025-11-27 00:46:42,725 | INFO     | did not find any defunct processes belonging to 29788
[2025-11-27 01:47:16] 2025-11-27 00:46:42,804 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:47:16] 2025-11-27 00:46:42,805 | INFO     | ready for new job
[2025-11-27 01:47:16] 2025-11-27 00:46:42,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:47:16] 2025-11-27 00:46:42,810 | INFO     | ***************************************
[2025-11-27 01:47:16] 2025-11-27 00:46:42,810 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:47:16] 2025-11-27 00:46:42,810 | INFO     | ***************************************
[2025-11-27 01:47:16] 2025-11-27 00:46:42,810 | INFO     | 
[2025-11-27 01:47:16] 2025-11-27 00:46:42,811 | INFO     | pilot is running in a VM
[2025-11-27 01:47:16] 2025-11-27 00:46:42,811 | INFO     | architecture information:
[2025-11-27 01:47:16] 2025-11-27 00:46:42,819 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:47:16] 2025-11-27 00:46:43,228 | INFO     | cat /etc/os-release:
[2025-11-27 01:47:16] NAME="CentOS Linux"
[2025-11-27 01:47:16] VERSION="7 (Core)"
[2025-11-27 01:47:16] ID="centos"
[2025-11-27 01:47:16] ID_LIKE="rhel fedora"
[2025-11-27 01:47:16] VERSION_ID="7"
[2025-11-27 01:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:47:16] ANSI_COLOR="0;31"
[2025-11-27 01:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:47:16] HOME_URL="https://www.centos.org/"
[2025-11-27 01:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:47:16] 
[2025-11-27 01:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:47:16] 
[2025-11-27 01:47:16] 2025-11-27 00:46:43,228 | INFO     | ***************************************
[2025-11-27 01:47:16] 2025-11-27 00:46:43,731 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-11-27 01:47:16] 2025-11-27 00:46:43,926 | INFO     | sufficient remaining disk space (495207841792 B)
[2025-11-27 01:47:16] 2025-11-27 00:46:43,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:47:16] 2025-11-27 00:46:43,926 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:47:16] 2025-11-27 00:46:43,927 | INFO     | update_server=False
[2025-11-27 01:47:16] 2025-11-27 00:46:43,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:47:16] 2025-11-27 00:46:43,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:47:16] 2025-11-27 00:46:44,186 | INFO     | all payload control threads have been joined
[2025-11-27 01:47:16] 2025-11-27 00:46:44,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:47:16] 2025-11-27 00:46:44,633 | INFO     | aborting loop
[2025-11-27 01:47:16] 2025-11-27 00:46:44,783 | INFO     | all job control threads have been joined
[2025-11-27 01:47:16] 2025-11-27 00:46:44,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:47:16] 2025-11-27 00:46:44,932 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,025 | INFO     | all data control threads have been joined
[2025-11-27 01:47:16] 2025-11-27 00:46:45,118 | INFO     | [job] validate thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,192 | INFO     | [payload] control thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:47:16] 2025-11-27 00:46:45,314 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,449 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,580 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,600 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,639 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,752 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,789 | INFO     | [job] control thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:45,808 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:46,031 | INFO     | [data] control thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:46,177 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:46,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:47,300 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:46:47,936 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:47:16] 2025-11-27 00:47:01,135 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:47:16] 2025-11-27 00:47:02,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678796805952)>', '<ExcThread(monitor, started 140678097008384)>']
[2025-11-27 01:47:16] 2025-11-27 00:47:07,515 | INFO     | all workflow threads have been joined
[2025-11-27 01:47:16] 2025-11-27 00:47:07,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:47:16] 2025-11-27 00:47:07,516 | INFO     | traces error code: 0
[2025-11-27 01:47:16] 2025-11-27 00:47:07,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:47:16] 2025-11-27 00:47:12,800 | INFO     | PID=23254 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:47:16] 2025-11-27 00:47:12,801 | INFO     | .. there are 9 such processes running
[2025-11-27 01:47:16] 2025-11-27 00:47:12,801 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:47:16] 2025-11-27 00:47:12,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:47:16] 2025-11-27 00:47:12,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:47:16] 2025-11-27 00:47:12,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:47:16] 2025-11-27 00:47:12,801 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 01:47:16] 2025-11-27 00:47:12,801 | INFO     | [monitor] control thread has ended
[2025-11-27 01:47:16] 2025-11-27 00:47:13,103 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:47:16] 2025-11-27 00:47:13,182 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:47:16] 2025-11-27 00:47:13,273 [wrapper] pilotpid: 23254
[2025-11-27 01:47:16] 2025-11-27 00:47:13,323 [wrapper] Pilot exit status: 0
[2025-11-27 01:47:16] 2025-11-27 00:47:13,702 [wrapper] pandaids: 6895340053
[2025-11-27 01:47:16] 2025-11-27 00:47:14,394 [wrapper] cleanup supervisor_pilot 15536 23255
[2025-11-27 01:47:16] 2025-11-27 00:47:14,495 [wrapper] Test setup, not cleaning
[2025-11-27 01:47:16] 2025-11-27 00:47:14,594 [wrapper] apfmon messages muted
[2025-11-27 01:47:16] 2025-11-27 00:47:14,658 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:47:16] 2025-11-27 00:47:14,750 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:47:16]  *** Error codes and diagnostics ***
[2025-11-27 01:47:16]     "exeErrorCode": 0,
[2025-11-27 01:47:16]     "exeErrorDiag": "",
[2025-11-27 01:47:16]     "pilotErrorCode": 0,
[2025-11-27 01:47:16]     "pilotErrorDiag": "",
[2025-11-27 01:47:16]  *** Listing of results directory ***
[2025-11-27 01:47:16] total 1327440
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc    576529 Nov 22 13:20 pilot3.tar.gz
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc      5112 Nov 22 13:34 queuedata.json
[2025-11-27 01:47:16] -rwx------. 1 boinc boinc     36292 Nov 22 13:34 runpilot2-wrapper.sh
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc       100 Nov 26 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:47:16] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 02:01 run_atlas
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc       105 Nov 26 02:01 job.xml
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc      6394 Nov 26 02:01 init_data.xml
[2025-11-27 01:47:16] -rw-r--r--. 2 boinc boinc 408986791 Nov 26 02:01 EVNT.47483658._000369.pool.root.1
[2025-11-27 01:47:16] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:01 start_atlas.sh
[2025-11-27 01:47:16] drwxrwx--x. 2 boinc boinc        68 Nov 26 02:01 shared
[2025-11-27 01:47:16] -rw-r--r--. 2 boinc boinc    590103 Nov 26 02:01 input.tar.gz
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc         0 Nov 26 02:01 boinc_lockfile
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc      2784 Nov 26 02:02 pandaJob.out
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc    991877 Nov 26 02:02 agis_schedconf.cvmfs.json
[2025-11-27 01:47:16] drwx------. 5 boinc boinc      4096 Nov 26 02:02 pilot3
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc       533 Nov 27 01:23 boinc_task_state.xml
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc 918784059 Nov 27 01:43 HITS.47556137._003656.pool.root.1
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc      1031 Nov 27 01:44 memory_monitor_summary.json
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc   1516240 Nov 27 01:45 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc   2464885 Nov 27 01:45 log.47556137._003656.job.log.tgz.1
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc      7937 Nov 27 01:46 heartbeat.json
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc        95 Nov 27 01:46 pilot_heartbeat.json
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc      8192 Nov 27 01:46 boinc_mmap_file
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc        29 Nov 27 01:46 wrapper_checkpoint.txt
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc       890 Nov 27 01:47 pilotlog.txt
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc  11347743 Nov 27 01:47 log.47556137._003656.job.log.1
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc       353 Nov 27 01:47 output.list
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc       620 Nov 27 01:47 runtime_log
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc  13834240 Nov 27 01:47 result.tar.gz
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc      8833 Nov 27 01:47 runtime_log.err
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc       662 Nov 27 01:47 473LDmT01g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg9JKDmHwEVPn.diag
[2025-11-27 01:47:16] -rw-r--r--. 1 boinc boinc     21464 Nov 27 01:47 stderr.txt
[2025-11-27 01:47:16] HITS file was successfully produced:
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc 918784059 Nov 27 01:43 shared/HITS.pool.root.1
[2025-11-27 01:47:16]  *** Contents of shared directory: ***
[2025-11-27 01:47:16] total 1310764
[2025-11-27 01:47:16] -rw-r--r--. 2 boinc boinc 408986791 Nov 26 02:01 ATLAS.root_0
[2025-11-27 01:47:16] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:01 start_atlas.sh
[2025-11-27 01:47:16] -rw-r--r--. 2 boinc boinc    590103 Nov 26 02:01 input.tar.gz
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc 918784059 Nov 27 01:43 HITS.pool.root.1
[2025-11-27 01:47:16] -rw-------. 1 boinc boinc  13834240 Nov 27 01:47 result.tar.gz
01:47:17 (13206): run_atlas exited; CPU time 324423.471727
01:47:17 (13206): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN