Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:27:32 (3119895): wrapper (7.7.26015): starting
11:27:32 (3119895): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 11:27:32] Arguments: --nthreads 3
[2025-11-23 11:27:32] Threads: 3
[2025-11-23 11:27:32] Checking for CVMFS
[2025-11-23 11:27:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:27:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:27:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:27:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:27:33] 2.9.2.0 2932062 39 58476 153205 0 88 34827251 36864000 0 130560 0 563479 99.997 4049 15454 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 11:27:33] CVMFS is ok
[2025-11-23 11:27:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:27:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:27:33] Further information can be found at the LHC@home message board.
[2025-11-23 11:27:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:27:33] Checking for apptainer binary...
[2025-11-23 11:27:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:27:33] Running /usr/bin/apptainer --version
[2025-11-23 11:27:33] apptainer version 1.4.1-1.1
[2025-11-23 11:27:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:27:33] thA335
[2025-11-23 11:27:33] apptainer works
[2025-11-23 11:27:33] Set ATHENA_PROC_NUMBER=3
[2025-11-23 11:27:33] Set ATHENA_CORE_NUMBER=3
[2025-11-23 11:27:33] Starting ATLAS job with PandaID=6895350979
[2025-11-23 11:27:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:31:52]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:31:52] 2025-11-23 10:31:00,269 | INFO     | ***************************************
[2025-11-23 11:31:52] 2025-11-23 10:31:00,772 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 11:31:52] 2025-11-23 10:31:00,786 | INFO     | sufficient remaining disk space (828035301376 B)
[2025-11-23 11:31:52] 2025-11-23 10:31:00,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:31:52] 2025-11-23 10:31:00,786 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:31:52] 2025-11-23 10:31:00,787 | INFO     | update_server=False
[2025-11-23 11:31:52] 2025-11-23 10:31:00,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:31:52] 2025-11-23 10:31:00,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:31:52] 2025-11-23 10:31:00,787 | INFO     | aborting loop
[2025-11-23 11:31:52] 2025-11-23 10:31:00,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:31:52] 2025-11-23 10:31:00,842 | INFO     | all job control threads have been joined
[2025-11-23 11:31:52] 2025-11-23 10:31:01,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:31:52] 2025-11-23 10:31:01,646 | INFO     | all data control threads have been joined
[2025-11-23 11:31:52] 2025-11-23 10:31:01,792 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:01,793 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:01,794 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:01,848 | INFO     | [job] control thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:01,919 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:01,999 | INFO     | all payload control threads have been joined
[2025-11-23 11:31:52] 2025-11-23 10:31:02,571 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:02,597 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:02,653 | INFO     | [data] control thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:02,840 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:02,948 | INFO     | [job] validate thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:03,005 | INFO     | [payload] control thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:03,070 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:03,109 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:03,140 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:03,219 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:03,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:31:52] 2025-11-23 10:31:07,645 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:31:52] 2025-11-23 10:31:31,231 | INFO     | PID=3123644 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 11:31:52] 2025-11-23 10:31:31,232 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:31:52] 2025-11-23 10:31:31,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:31:52] 2025-11-23 10:31:31,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:31:52] 2025-11-23 10:31:46,224 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:31:52] 2025-11-23 10:31:47,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475621599040)>', '<ExcThread(monitor, started 140474681648896)>']
[2025-11-23 11:31:52] 2025-11-23 10:31:48,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:31:52] 2025-11-23 10:31:48,322 | INFO     | [monitor] control thread has ended
[2025-11-23 11:31:52] 2025-11-23 10:31:52,433 | INFO     | all workflow threads have been joined
[2025-11-23 11:31:52] 2025-11-23 10:31:52,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:31:52] 2025-11-23 10:31:52,433 | INFO     | traces error code: 0
[2025-11-23 11:31:52] 2025-11-23 10:31:52,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:31:52] 2025-11-23 10:31:52,481 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:31:52] 2025-11-23 10:31:52,484 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:31:52] 2025-11-23 10:31:52,487 [wrapper] pilotpid: 3123644
[2025-11-23 11:31:52] 2025-11-23 10:31:52,490 [wrapper] Pilot exit status: 0
[2025-11-23 11:31:52] 2025-11-23 10:31:52,497 [wrapper] pandaids: 6895350979
[2025-11-23 11:31:52] 2025-11-23 10:31:52,513 [wrapper] cleanup supervisor_pilot 3123650 3123645
[2025-11-23 11:31:52] 2025-11-23 10:31:52,516 [wrapper] Test setup, not cleaning
[2025-11-23 11:31:52] 2025-11-23 10:31:52,519 [wrapper] apfmon messages muted
[2025-11-23 11:31:52] 2025-11-23 10:31:52,521 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:31:52] 2025-11-23 10:31:52,523 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:31:52]  *** Error codes and diagnostics ***
[2025-11-23 11:31:52]     "exeErrorCode": 65,
[2025-11-23 11:31:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 11:31:52]     "pilotErrorCode": 1305,
[2025-11-23 11:31:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 11:31:52]  *** Listing of results directory ***
[2025-11-23 11:31:52] total 403032
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc    576529 Nov 22 23:07 pilot3.tar.gz
[2025-11-23 11:31:52] -rwx------ 1 boinc boinc     36292 Nov 22 23:42 runpilot2-wrapper.sh
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc      5112 Nov 22 23:42 queuedata.json
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc       100 Nov 23 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:31:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 11:27 run_atlas
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc       105 Nov 23 11:27 job.xml
[2025-11-23 11:31:52] -rw-r--r-- 2 boinc boinc 408510972 Nov 23 11:27 EVNT.47483658._001121.pool.root.1
[2025-11-23 11:31:52] -rw-r--r-- 2 boinc boinc    590093 Nov 23 11:27 input.tar.gz
[2025-11-23 11:31:52] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:27 start_atlas.sh
[2025-11-23 11:31:52] drwxrwx--x 2 boinc boinc      4096 Nov 23 11:27 shared
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:27 boinc_setup_complete
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc      6194 Nov 23 11:27 init_data.xml
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:27 boinc_lockfile
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc      2784 Nov 23 11:27 pandaJob.out
[2025-11-23 11:31:52] -rw------- 1 boinc boinc    989784 Nov 23 11:27 agis_schedconf.cvmfs.json
[2025-11-23 11:31:52] -rw------- 1 boinc boinc   1526164 Nov 23 11:27 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:31:52] drwx------ 5 boinc boinc      4096 Nov 23 11:27 pilot3
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc       523 Nov 23 11:28 boinc_task_state.xml
[2025-11-23 11:31:52] -rw------- 1 boinc boinc       956 Nov 23 11:28 memory_monitor_summary.json
[2025-11-23 11:31:52] -rw------- 1 boinc boinc     54210 Nov 23 11:28 log.47556149._001075.job.log.tgz.1
[2025-11-23 11:31:52] -rw------- 1 boinc boinc        95 Nov 23 11:30 pilot_heartbeat.json
[2025-11-23 11:31:52] -rw------- 1 boinc boinc      8404 Nov 23 11:30 heartbeat.json
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc        23 Nov 23 11:31 wrapper_checkpoint.txt
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc      8192 Nov 23 11:31 boinc_mmap_file
[2025-11-23 11:31:52] -rw------- 1 boinc boinc      4752 Nov 23 11:31 pilotlog.txt
[2025-11-23 11:31:52] -rw------- 1 boinc boinc     93423 Nov 23 11:31 log.47556149._001075.job.log.1
[2025-11-23 11:31:52] -rw------- 1 boinc boinc       186 Nov 23 11:31 output.list
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc       620 Nov 23 11:31 runtime_log
[2025-11-23 11:31:52] -rw------- 1 boinc boinc    163840 Nov 23 11:31 result.tar.gz
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc      8744 Nov 23 11:31 runtime_log.err
[2025-11-23 11:31:52] -rw------- 1 boinc boinc       649 Nov 23 11:31 hnmNDmjUBh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPRKKDmgXkEVm.diag
[2025-11-23 11:31:52] -rw-r--r-- 1 boinc boinc      8334 Nov 23 11:31 stderr.txt
[2025-11-23 11:31:52] No HITS result produced
[2025-11-23 11:31:52]  *** Contents of shared directory: ***
[2025-11-23 11:31:52] total 399696
[2025-11-23 11:31:52] -rw-r--r-- 2 boinc boinc 408510972 Nov 23 11:27 ATLAS.root_0
[2025-11-23 11:31:52] -rw-r--r-- 2 boinc boinc    590093 Nov 23 11:27 input.tar.gz
[2025-11-23 11:31:52] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:27 start_atlas.sh
[2025-11-23 11:31:52] -rw------- 1 boinc boinc    163840 Nov 23 11:31 result.tar.gz
11:31:54 (3119895): run_atlas exited; CPU time 32.058652
11:31:54 (3119895): called boinc_finish(0)

</stderr_txt>
]]>

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