Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:00:54 (25697): wrapper (7.7.26015): starting
05:00:54 (25697): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 05:00:54] Arguments: --nthreads 8
[2025-11-23 05:00:54] Threads: 8
[2025-11-23 05:00:54] Checking for CVMFS
[2025-11-23 05:00:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 05:00:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 05:00:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 05:00:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 05:00:54] 2.11.2.0 2873 55932 92564 153203 0 82 13210838 20275200 1 130560 0 13755663 99.822 3393150 30618 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 05:00:54] CVMFS is ok
[2025-11-23 05:00:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 05:00:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 05:00:54] Further information can be found at the LHC@home message board.
[2025-11-23 05:00:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 05:00:54] Checking for apptainer binary...
[2025-11-23 05:00:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 05:00:54] Running /usr/bin/apptainer --version
[2025-11-23 05:00:54] apptainer version 1.3.2-1.el7
[2025-11-23 05:00:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 05:00:56] c-115-13.aglt2.org
[2025-11-23 05:00:56] apptainer works
[2025-11-23 05:00:56] Set ATHENA_PROC_NUMBER=8
[2025-11-23 05:00:56] Set ATHENA_CORE_NUMBER=8
[2025-11-23 05:00:56] Starting ATLAS job with PandaID=6895339664
[2025-11-23 05:00:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:57:25]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:57:25] 2025-11-23 20:56:36,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:57:25] 2025-11-23 20:56:37,823 | INFO     | time since job start (39323s) is within the limit (172800.0s)
[2025-11-23 15:57:25] 2025-11-23 20:56:38,563 | INFO     | monitor loop #2897: job 0:6895339664 is in state 'finished'
[2025-11-23 15:57:25] 2025-11-23 20:56:38,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,357 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 15:57:25] 2025-11-23 20:56:39,360 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-23 15:57:25] 2025-11-23 20:56:39,363 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895339664/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,363 | INFO     | extracted standard info from prmon json
[2025-11-23 15:57:25] 2025-11-23 20:56:39,363 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:57:25] 2025-11-23 20:56:39,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:57:25] 2025-11-23 20:56:39,373 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:57:25] 2025-11-23 20:56:39,374 | INFO     | sum of square deviations: 82820529635.27193
[2025-11-23 15:57:25] 2025-11-23 20:56:39,382 | INFO     | sum of deviations: 718165756400.7173
[2025-11-23 15:57:25] 2025-11-23 20:56:39,382 | INFO     | mean x: 1763911718.076087
[2025-11-23 15:57:25] 2025-11-23 20:56:39,382 | INFO     | mean y: 3166196.4751552795
[2025-11-23 15:57:25] 2025-11-23 20:56:39,382 | INFO     | intersect: -15292328758.8807
[2025-11-23 15:57:25] 2025-11-23 20:56:39,383 | INFO     | chi2: 5.852598476555305
[2025-11-23 15:57:25] 2025-11-23 20:56:39,384 | INFO     | sum of square deviations: 80906541783.59929
[2025-11-23 15:57:25] 2025-11-23 20:56:39,392 | INFO     | sum of deviations: 947979649665.6952
[2025-11-23 15:57:25] 2025-11-23 20:56:39,392 | INFO     | mean x: 1763911565.5805948
[2025-11-23 15:57:25] 2025-11-23 20:56:39,392 | INFO     | mean y: 3184501.539906103
[2025-11-23 15:57:25] 2025-11-23 20:56:39,392 | INFO     | intersect: -20664517159.13502
[2025-11-23 15:57:25] 2025-11-23 20:56:39,393 | INFO     | chi2: 2.8204501099405452
[2025-11-23 15:57:25] 2025-11-23 20:56:39,393 | INFO     | current chi2=2.8204501099405452 (change=51.80858346529536 %)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,393 | INFO     | sum of square deviations: 79022197705.73442
[2025-11-23 15:57:25] 2025-11-23 20:56:39,401 | INFO     | sum of deviations: 975737837629.9812
[2025-11-23 15:57:25] 2025-11-23 20:56:39,401 | INFO     | mean x: 1763911413.0820189
[2025-11-23 15:57:25] 2025-11-23 20:56:39,401 | INFO     | mean y: 3186729.5772870663
[2025-11-23 15:57:25] 2025-11-23 20:56:39,401 | INFO     | intersect: -21776960595.363503
[2025-11-23 15:57:25] 2025-11-23 20:56:39,402 | INFO     | chi2: 2.5534843300647463
[2025-11-23 15:57:25] 2025-11-23 20:56:39,402 | INFO     | current chi2=2.5534843300647463 (change=9.4653608278654 %)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,402 | INFO     | right removable region: 633
[2025-11-23 15:57:25] 2025-11-23 20:56:39,403 | INFO     | sum of square deviations: 80906315473.59926
[2025-11-23 15:57:25] 2025-11-23 20:56:39,411 | INFO     | sum of deviations: 520479943761.1469
[2025-11-23 15:57:25] 2025-11-23 20:56:39,411 | INFO     | mean x: 1763911870.5805948
[2025-11-23 15:57:25] 2025-11-23 20:56:39,411 | INFO     | mean y: 3181914.5602503913
[2025-11-23 15:57:25] 2025-11-23 20:56:39,411 | INFO     | intersect: -11344272802.97646
[2025-11-23 15:57:25] 2025-11-23 20:56:39,412 | INFO     | chi2: 3.4784351917486287
[2025-11-23 15:57:25] 2025-11-23 20:56:39,412 | INFO     | current chi2=3.4784351917486287 (change=40.56596901901342 %)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,413 | INFO     | sum of square deviations: 79021900757.73451
[2025-11-23 15:57:25] 2025-11-23 20:56:39,420 | INFO     | sum of deviations: 483734758403.9092
[2025-11-23 15:57:25] 2025-11-23 20:56:39,421 | INFO     | mean x: 1763912023.0820189
[2025-11-23 15:57:25] 2025-11-23 20:56:39,421 | INFO     | mean y: 3184886.2902208203
[2025-11-23 15:57:25] 2025-11-23 20:56:39,421 | INFO     | intersect: -10794651512.852774
[2025-11-23 15:57:25] 2025-11-23 20:56:39,421 | INFO     | chi2: 3.449962759117293
[2025-11-23 15:57:25] 2025-11-23 20:56:39,422 | INFO     | current chi2=3.449962759117293 (change=0.8185414147969858 %)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,422 | INFO     | left removable region: 20
[2025-11-23 15:57:25] 2025-11-23 20:56:39,422 | INFO     | sum of square deviations: 71426955482.58069
[2025-11-23 15:57:25] 2025-11-23 20:56:39,429 | INFO     | sum of deviations: 671835259735.545
[2025-11-23 15:57:25] 2025-11-23 20:56:39,430 | INFO     | mean x: 1763911992.5872757
[2025-11-23 15:57:25] 2025-11-23 20:56:39,430 | INFO     | mean y: 3211550.326264274
[2025-11-23 15:57:25] 2025-11-23 20:56:39,430 | INFO     | intersect: -16587979599.90444
[2025-11-23 15:57:25] 2025-11-23 20:56:39,430 | INFO     | chi2: 0.08548405014198528
[2025-11-23 15:57:25] 2025-11-23 20:56:39,431 | INFO     | current memory leak: 9.41 B/s (using 613 data points, chi2=0.09)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,431 | INFO     | could have reported an average CPU frequency of 2394 MHz (25 samples)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,431 | INFO     | ..............................
[2025-11-23 15:57:25] 2025-11-23 20:56:39,431 | INFO     | . Timing measurements:
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | . get job = 0 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | . initial setup = 2 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | . payload setup = 8 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | . stage-in = 0 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | . payload execution = 39284 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | . stage-out = 3 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | . log creation = 0 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,432 | INFO     | ..............................
[2025-11-23 15:57:25] 2025-11-23 20:56:39,513 | INFO     | 
[2025-11-23 15:57:25] 2025-11-23 20:56:39,513 | INFO     | job summary report
[2025-11-23 15:57:25] 2025-11-23 20:56:39,513 | INFO     | --------------------------------------------------
[2025-11-23 15:57:25] 2025-11-23 20:56:39,513 | INFO     | PanDA job id: 6895339664
[2025-11-23 15:57:25] 2025-11-23 20:56:39,514 | INFO     | task id: 47556137
[2025-11-23 15:57:25] 2025-11-23 20:56:39,514 | INFO     | errors: (none)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:57:25] 2025-11-23 20:56:39,514 | INFO     | pilot state: finished 
[2025-11-23 15:57:25] 2025-11-23 20:56:39,514 | INFO     | transexitcode: 0
[2025-11-23 15:57:25] 2025-11-23 20:56:39,515 | INFO     | exeerrorcode: 0
[2025-11-23 15:57:25] 2025-11-23 20:56:39,515 | INFO     | exeerrordiag: 
[2025-11-23 15:57:25] 2025-11-23 20:56:39,515 | INFO     | exitcode: 0
[2025-11-23 15:57:25] 2025-11-23 20:56:39,515 | INFO     | exitmsg: OK
[2025-11-23 15:57:25] 2025-11-23 20:56:39,515 | INFO     | cpuconsumptiontime: 305489 s
[2025-11-23 15:57:25] 2025-11-23 20:56:39,515 | INFO     | nevents: 1000
[2025-11-23 15:57:25] 2025-11-23 20:56:39,516 | INFO     | neventsw: 0
[2025-11-23 15:57:25] 2025-11-23 20:56:39,516 | INFO     | pid: 3897
[2025-11-23 15:57:25] 2025-11-23 20:56:39,516 | INFO     | pgrp: 3897
[2025-11-23 15:57:25] 2025-11-23 20:56:39,516 | INFO     | corecount: 8
[2025-11-23 15:57:25] 2025-11-23 20:56:39,516 | INFO     | event service: False
[2025-11-23 15:57:25] 2025-11-23 20:56:39,516 | INFO     | sizes: {0: 2298579, 1: 2298778, 6: 2299040, 11: 2299068, 39296: 2342375, 39297: 2342374, 39301: 2351552, 39302: 2351608, 39308: 2351918}
[2025-11-23 15:57:25] 2025-11-23 20:56:39,517 | INFO     | --------------------------------------------------
[2025-11-23 15:57:25] 2025-11-23 20:56:39,517 | INFO     | 
[2025-11-23 15:57:25] 2025-11-23 20:56:39,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 15:57:25] 2025-11-23 20:56:39,544 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:57:25] 2025-11-23 20:56:39,549 | INFO     | job 6895339664 has completed (purged errors)
[2025-11-23 15:57:25] 2025-11-23 20:56:39,549 | INFO     | overall cleanup function is called
[2025-11-23 15:57:25] 2025-11-23 20:56:40,564 | INFO     | --- collectZombieJob: --- 10, [3897]
[2025-11-23 15:57:25] 2025-11-23 20:56:40,564 | INFO     | zombie collector waiting for pid 3897
[2025-11-23 15:57:25] 2025-11-23 20:56:40,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:57:25] 2025-11-23 20:56:40,565 | INFO     | collected zombie processes
[2025-11-23 15:57:25] 2025-11-23 20:56:40,565 | INFO     | will attempt to kill all subprocesses of pid=3897
[2025-11-23 15:57:25] 2025-11-23 20:56:40,651 | INFO     | process IDs to be killed: [3897] (in reverse order)
[2025-11-23 15:57:25] 2025-11-23 20:56:40,706 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:57:25] 2025-11-23 20:56:40,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:57:25] 2025-11-23 20:56:40,711 | INFO     | did not find any defunct processes belonging to 3897
[2025-11-23 15:57:25] 2025-11-23 20:56:40,714 | INFO     | did not find any defunct processes belonging to 3897
[2025-11-23 15:57:25] 2025-11-23 20:56:40,717 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:57:25] 2025-11-23 20:56:40,717 | INFO     | ready for new job
[2025-11-23 15:57:25] 2025-11-23 20:56:40,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:57:25] 2025-11-23 20:56:40,720 | INFO     | ***************************************
[2025-11-23 15:57:25] 2025-11-23 20:56:40,720 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:57:25] 2025-11-23 20:56:40,720 | INFO     | ***************************************
[2025-11-23 15:57:25] 2025-11-23 20:56:40,720 | INFO     | 
[2025-11-23 15:57:25] 2025-11-23 20:56:40,721 | INFO     | architecture information:
[2025-11-23 15:57:25] 2025-11-23 20:56:40,721 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:57:25] 2025-11-23 20:56:40,739 | INFO     | cat /etc/os-release:
[2025-11-23 15:57:25] NAME="CentOS Linux"
[2025-11-23 15:57:25] VERSION="7 (Core)"
[2025-11-23 15:57:25] ID="centos"
[2025-11-23 15:57:25] ID_LIKE="rhel fedora"
[2025-11-23 15:57:25] VERSION_ID="7"
[2025-11-23 15:57:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:57:25] ANSI_COLOR="0;31"
[2025-11-23 15:57:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:57:25] HOME_URL="https://www.centos.org/"
[2025-11-23 15:57:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:57:25] 
[2025-11-23 15:57:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:57:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:57:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:57:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:57:25] 
[2025-11-23 15:57:25] 2025-11-23 20:56:40,740 | INFO     | ***************************************
[2025-11-23 15:57:25] 2025-11-23 20:56:41,243 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 15:57:25] 2025-11-23 20:56:41,263 | INFO     | sufficient remaining disk space (17472421888 B)
[2025-11-23 15:57:25] 2025-11-23 20:56:41,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:57:25] 2025-11-23 20:56:41,263 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:57:25] 2025-11-23 20:56:41,264 | INFO     | update_server=False
[2025-11-23 15:57:25] 2025-11-23 20:56:41,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:57:25] 2025-11-23 20:56:41,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:57:25] 2025-11-23 20:56:41,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:57:25] 2025-11-23 20:56:41,351 | INFO     | all job control threads have been joined
[2025-11-23 15:57:25] 2025-11-23 20:56:42,012 | INFO     | all data control threads have been joined
[2025-11-23 15:57:25] 2025-11-23 20:56:42,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:57:25] 2025-11-23 20:56:42,072 | INFO     | aborting loop
[2025-11-23 15:57:25] 2025-11-23 20:56:42,233 | INFO     | all payload control threads have been joined
[2025-11-23 15:57:25] 2025-11-23 20:56:42,270 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:42,270 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:42,357 | INFO     | [job] control thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:42,543 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:42,699 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:42,746 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:42,763 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,013 | INFO     | [data] control thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,037 | INFO     | [job] validate thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,078 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,239 | INFO     | [payload] control thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,325 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,326 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,439 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,563 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:56:43,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:57:25] 2025-11-23 20:56:47,961 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:57:25] 2025-11-23 20:57:10,940 | INFO     | PID=29793 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 15:57:25] 2025-11-23 20:57:10,941 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:57:25] 2025-11-23 20:57:10,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:57:25] 2025-11-23 20:57:10,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:57:25] 2025-11-23 20:57:19,460 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:57:25] 2025-11-23 20:57:20,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660309559104)>', '<ExcThread(monitor, started 140659474282240)>']
[2025-11-23 15:57:25] 2025-11-23 20:57:20,993 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:57:25] 2025-11-23 20:57:20,993 | INFO     | [monitor] control thread has ended
[2025-11-23 15:57:25] 2025-11-23 20:57:25,322 | INFO     | all workflow threads have been joined
[2025-11-23 15:57:25] 2025-11-23 20:57:25,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:57:25] 2025-11-23 20:57:25,322 | INFO     | traces error code: 0
[2025-11-23 15:57:25] 2025-11-23 20:57:25,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:57:25] 2025-11-23 20:57:25,432 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:57:25] 2025-11-23 20:57:25,437 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:57:25] 2025-11-23 20:57:25,441 [wrapper] pilotpid: 29793
[2025-11-23 15:57:25] 2025-11-23 20:57:25,446 [wrapper] Pilot exit status: 0
[2025-11-23 15:57:25] 2025-11-23 20:57:25,463 [wrapper] pandaids: 6895339664
[2025-11-23 15:57:25] 2025-11-23 20:57:25,511 [wrapper] cleanup supervisor_pilot 10391 29794
[2025-11-23 15:57:25] 2025-11-23 20:57:25,515 [wrapper] Test setup, not cleaning
[2025-11-23 15:57:25] 2025-11-23 20:57:25,521 [wrapper] apfmon messages muted
[2025-11-23 15:57:25] 2025-11-23 20:57:25,525 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:57:25] 2025-11-23 20:57:25,530 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:57:25]  *** Error codes and diagnostics ***
[2025-11-23 15:57:25]     "exeErrorCode": 0,
[2025-11-23 15:57:25]     "exeErrorDiag": "",
[2025-11-23 15:57:25]     "pilotErrorCode": 0,
[2025-11-23 15:57:25]     "pilotErrorDiag": "",
[2025-11-23 15:57:25]  *** Listing of results directory ***
[2025-11-23 15:57:25] total 1312560
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 05:57 pilot3.tar.gz
[2025-11-23 15:57:25] -rwx------ 1 boincer umatlas     36292 Nov 22 06:12 runpilot2-wrapper.sh
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 06:12 queuedata.json
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas       100 Nov 23 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:57:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 05:00 run_atlas
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas       105 Nov 23 05:00 job.xml
[2025-11-23 15:57:25] -rw-r--r-- 2 boincer umatlas 409763536 Nov 23 05:00 EVNT.47483658._000356.pool.root.1
[2025-11-23 15:57:25] drwxrwx--x 2 boincer umatlas      4096 Nov 23 05:00 shared
[2025-11-23 15:57:25] -rw-r--r-- 2 boincer umatlas    590101 Nov 23 05:00 input.tar.gz
[2025-11-23 15:57:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:00 start_atlas.sh
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas         0 Nov 23 05:00 boinc_lockfile
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas      2782 Nov 23 05:00 pandaJob.out
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas        57 Nov 23 05:00 setup.sh.local
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas    989784 Nov 23 05:01 agis_schedconf.cvmfs.json
[2025-11-23 15:57:25] drwx------ 5 boincer umatlas      4096 Nov 23 05:01 pilot3
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas       533 Nov 23 15:48 boinc_task_state.xml
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 15:48 init_data.xml
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas 915730012 Nov 23 15:55 HITS.47556137._003521.pool.root.1
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas        95 Nov 23 15:56 pilot_heartbeat.json
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas      1061 Nov 23 15:56 memory_monitor_summary.json
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas   1526164 Nov 23 15:56 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas   1901165 Nov 23 15:56 log.47556137._003521.job.log.tgz.1
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas      8655 Nov 23 15:56 heartbeat.json
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas      4746 Nov 23 15:57 pilotlog.txt
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 15:57 boinc_mmap_file
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas   5421489 Nov 23 15:57 log.47556137._003521.job.log.1
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas        29 Nov 23 15:57 wrapper_checkpoint.txt
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas       353 Nov 23 15:57 output.list
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas       620 Nov 23 15:57 runtime_log
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas   7342080 Nov 23 15:57 result.tar.gz
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas       668 Nov 23 15:57 v3GLDmNi0g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW5HKDmXOMfRm.diag
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 15:57 runtime_log.err
[2025-11-23 15:57:25] -rw-r--r-- 1 boincer umatlas     21333 Nov 23 15:57 stderr.txt
[2025-11-23 15:57:25] HITS file was successfully produced:
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas 915730012 Nov 23 15:55 shared/HITS.pool.root.1
[2025-11-23 15:57:25]  *** Contents of shared directory: ***
[2025-11-23 15:57:25] total 1302200
[2025-11-23 15:57:25] -rw-r--r-- 2 boincer umatlas 409763536 Nov 23 05:00 ATLAS.root_0
[2025-11-23 15:57:25] -rw-r--r-- 2 boincer umatlas    590101 Nov 23 05:00 input.tar.gz
[2025-11-23 15:57:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:00 start_atlas.sh
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas 915730012 Nov 23 15:55 HITS.pool.root.1
[2025-11-23 15:57:25] -rw------- 1 boincer umatlas   7342080 Nov 23 15:57 result.tar.gz
15:57:27 (25697): run_atlas exited; CPU time 303687.424680
15:57:27 (25697): called boinc_finish(0)

</stderr_txt>
]]>

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