Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:04:58 (29789): wrapper (7.7.26015): starting
01:04:58 (29789): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 01:04:58] Arguments: --nthreads 8
[2025-11-26 01:04:58] Threads: 8
[2025-11-26 01:04:58] Checking for CVMFS
[2025-11-26 01:04:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 01:04:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 01:04:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 01:05:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 01:05:01] 2.11.2.0 22322 209824 138216 153302 1 278 14506143 25165825 3796 130560 12 83461156 99.899 38083841 2266 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 01:05:01] CVMFS is ok
[2025-11-26 01:05:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 01:05:01] Checking for apptainer binary...
[2025-11-26 01:05:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 01:05:01] Running /usr/bin/apptainer --version
[2025-11-26 01:05:01] apptainer version 1.3.2-1.el7
[2025-11-26 01:05:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 01:05:09] cg-vwn447.simple-grid.lan
[2025-11-26 01:05:09] apptainer works
[2025-11-26 01:05:09] Set ATHENA_PROC_NUMBER=8
[2025-11-26 01:05:09] Set ATHENA_CORE_NUMBER=8
[2025-11-26 01:05:09] Starting ATLAS job with PandaID=6895339654
[2025-11-26 01:05:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:05:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:05:44] 2025-11-26 23:05:06,514 | INFO     | time since job start (82567s) is within the limit (172800.0s)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,270 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:05:44] 2025-11-26 23:05:07,271 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 00:05:44] 2025-11-26 23:05:07,273 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895339654/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,273 | INFO     | extracted standard info from prmon json
[2025-11-27 00:05:44] 2025-11-26 23:05:07,273 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:05:44] 2025-11-26 23:05:07,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:05:44] 2025-11-26 23:05:07,302 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:05:44] 2025-11-26 23:05:07,304 | INFO     | sum of square deviations: 756158435987.0938
[2025-11-27 00:05:44] 2025-11-26 23:05:07,355 | INFO     | sum of deviations: 3158156795175.525
[2025-11-27 00:05:44] 2025-11-26 23:05:07,356 | INFO     | mean x: 1764157170.6069837
[2025-11-27 00:05:44] 2025-11-26 23:05:07,356 | INFO     | mean y: 2878084.263744428
[2025-11-27 00:05:44] 2025-11-26 23:05:07,356 | INFO     | intersect: -7365266858.584145
[2025-11-27 00:05:44] 2025-11-26 23:05:07,358 | INFO     | chi2: 6.673971848044569
[2025-11-27 00:05:44] 2025-11-26 23:05:07,360 | INFO     | sum of square deviations: 747763412088.4441
[2025-11-27 00:05:44] 2025-11-26 23:05:07,414 | INFO     | sum of deviations: 3615555207117.4507
[2025-11-27 00:05:44] 2025-11-26 23:05:07,415 | INFO     | mean x: 1764157018.1111112
[2025-11-27 00:05:44] 2025-11-26 23:05:07,415 | INFO     | mean y: 2886392.2386278897
[2025-11-27 00:05:44] 2025-11-26 23:05:07,415 | INFO     | intersect: -8527093799.209943
[2025-11-27 00:05:44] 2025-11-26 23:05:07,417 | INFO     | chi2: 3.5059778008567597
[2025-11-27 00:05:44] 2025-11-26 23:05:07,417 | INFO     | current chi2=3.5059778008567597 (change=47.46789646881731 %)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,419 | INFO     | sum of square deviations: 739430679896.4784
[2025-11-27 00:05:44] 2025-11-26 23:05:07,465 | INFO     | sum of deviations: 3768092971639.0674
[2025-11-27 00:05:44] 2025-11-26 23:05:07,466 | INFO     | mean x: 1764156865.614521
[2025-11-27 00:05:44] 2025-11-26 23:05:07,466 | INFO     | mean y: 2889181.4603293412
[2025-11-27 00:05:44] 2025-11-26 23:05:07,466 | INFO     | intersect: -8987144998.784325
[2025-11-27 00:05:44] 2025-11-26 23:05:07,468 | INFO     | chi2: 2.987870612578808
[2025-11-27 00:05:44] 2025-11-26 23:05:07,468 | INFO     | current chi2=2.987870612578808 (change=14.77782284164324 %)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,468 | INFO     | right removable region: 1335
[2025-11-27 00:05:44] 2025-11-26 23:05:07,470 | INFO     | sum of square deviations: 747762503188.4447
[2025-11-27 00:05:44] 2025-11-26 23:05:07,517 | INFO     | sum of deviations: 2733145761500.5557
[2025-11-27 00:05:44] 2025-11-26 23:05:07,517 | INFO     | mean x: 1764157323.1111112
[2025-11-27 00:05:44] 2025-11-26 23:05:07,517 | INFO     | mean y: 2885799.788217748
[2025-11-27 00:05:44] 2025-11-26 23:05:07,517 | INFO     | intersect: -6445283357.827561
[2025-11-27 00:05:44] 2025-11-26 23:05:07,519 | INFO     | chi2: 3.999555872350884
[2025-11-27 00:05:44] 2025-11-26 23:05:07,519 | INFO     | current chi2=3.999555872350884 (change=40.07232929035012 %)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,521 | INFO     | sum of square deviations: 739429433973.6046
[2025-11-27 00:05:44] 2025-11-26 23:05:07,579 | INFO     | sum of deviations: 2635502888814.706
[2025-11-27 00:05:44] 2025-11-26 23:05:07,579 | INFO     | mean x: 1764157475.6107783
[2025-11-27 00:05:44] 2025-11-26 23:05:07,579 | INFO     | mean y: 2887586.4648203594
[2025-11-27 00:05:44] 2025-11-26 23:05:07,579 | INFO     | intersect: -6284990485.024334
[2025-11-27 00:05:44] 2025-11-26 23:05:07,581 | INFO     | chi2: 3.9330873074350805
[2025-11-27 00:05:44] 2025-11-26 23:05:07,581 | INFO     | current chi2=3.9330873074350805 (change=1.6618986466798407 %)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,581 | INFO     | left removable region: 20
[2025-11-27 00:05:44] 2025-11-26 23:05:07,583 | INFO     | sum of square deviations: 705107401732.4307
[2025-11-27 00:05:44] 2025-11-26 23:05:07,639 | INFO     | sum of deviations: 3106460168672.7217
[2025-11-27 00:05:44] 2025-11-26 23:05:07,639 | INFO     | mean x: 1764157445.1155894
[2025-11-27 00:05:44] 2025-11-26 23:05:07,639 | INFO     | mean y: 2901525.896577947
[2025-11-27 00:05:44] 2025-11-26 23:05:07,639 | INFO     | intersect: -7769368090.128007
[2025-11-27 00:05:44] 2025-11-26 23:05:07,641 | INFO     | chi2: 0.18104199482360417
[2025-11-27 00:05:44] 2025-11-26 23:05:07,641 | INFO     | current memory leak: 4.41 B/s (using 1315 data points, chi2=0.18)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,643 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,643 | INFO     | ..............................
[2025-11-27 00:05:44] 2025-11-26 23:05:07,643 | INFO     | . Timing measurements:
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | . get job = 0 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | . initial setup = 9 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | . payload setup = 155 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | . stage-in = 0 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | . payload execution = 82095 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | . stage-out = 4 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | . log creation = 2 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,644 | INFO     | ..............................
[2025-11-27 00:05:44] 2025-11-26 23:05:07,767 | INFO     | 
[2025-11-27 00:05:44] 2025-11-26 23:05:07,767 | INFO     | job summary report
[2025-11-27 00:05:44] 2025-11-26 23:05:07,767 | INFO     | --------------------------------------------------
[2025-11-27 00:05:44] 2025-11-26 23:05:07,767 | INFO     | PanDA job id: 6895339654
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | task id: 47556137
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | errors: (none)
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | pilot state: finished 
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | transexitcode: 0
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | exeerrorcode: 0
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | exeerrordiag: 
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | exitcode: 0
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | exitmsg: OK
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | cpuconsumptiontime: 312593 s
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | nevents: 1000
[2025-11-27 00:05:44] 2025-11-26 23:05:07,768 | INFO     | neventsw: 0
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | pid: 7784
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | pgrp: 7784
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | corecount: 8
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | event service: False
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | sizes: {0: 2284031, 1: 2284286, 12: 2284286, 23: 2284314, 34: 2284342, 44: 2284370, 55: 2284526, 66: 2284554, 77: 2284582, 87: 2284638, 98: 2284666, 102: 2285236, 
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | --------------------------------------------------
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | 
[2025-11-27 00:05:44] 2025-11-26 23:05:07,769 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 00:05:44] 2025-11-26 23:05:08,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | job 6895339654 has completed (purged errors)
[2025-11-27 00:05:44] 2025-11-26 23:05:08,020 | INFO     | overall cleanup function is called
[2025-11-27 00:05:44] 2025-11-26 23:05:09,036 | INFO     | --- collectZombieJob: --- 10, [7784]
[2025-11-27 00:05:44] 2025-11-26 23:05:09,037 | INFO     | zombie collector waiting for pid 7784
[2025-11-27 00:05:44] 2025-11-26 23:05:09,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:05:44] 2025-11-26 23:05:09,037 | INFO     | collected zombie processes
[2025-11-27 00:05:44] 2025-11-26 23:05:09,037 | INFO     | will attempt to kill all subprocesses of pid=7784
[2025-11-27 00:05:44] 2025-11-26 23:05:09,153 | INFO     | process IDs to be killed: [7784] (in reverse order)
[2025-11-27 00:05:44] 2025-11-26 23:05:09,996 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:05:44] 2025-11-26 23:05:09,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:05:44] 2025-11-26 23:05:09,999 | INFO     | did not find any defunct processes belonging to 7784
[2025-11-27 00:05:44] 2025-11-26 23:05:10,002 | INFO     | did not find any defunct processes belonging to 7784
[2025-11-27 00:05:44] 2025-11-26 23:05:10,062 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:05:44] 2025-11-26 23:05:10,062 | INFO     | ready for new job
[2025-11-27 00:05:44] 2025-11-26 23:05:10,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:05:44] 2025-11-26 23:05:10,067 | INFO     | ***************************************
[2025-11-27 00:05:44] 2025-11-26 23:05:10,067 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:05:44] 2025-11-26 23:05:10,067 | INFO     | ***************************************
[2025-11-27 00:05:44] 2025-11-26 23:05:10,067 | INFO     | 
[2025-11-27 00:05:44] 2025-11-26 23:05:10,068 | INFO     | pilot is running in a VM
[2025-11-27 00:05:44] 2025-11-26 23:05:10,068 | INFO     | architecture information:
[2025-11-27 00:05:44] 2025-11-26 23:05:10,075 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:05:44] 2025-11-26 23:05:10,288 | INFO     | cat /etc/os-release:
[2025-11-27 00:05:44] NAME="CentOS Linux"
[2025-11-27 00:05:44] VERSION="7 (Core)"
[2025-11-27 00:05:44] ID="centos"
[2025-11-27 00:05:44] ID_LIKE="rhel fedora"
[2025-11-27 00:05:44] VERSION_ID="7"
[2025-11-27 00:05:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:05:44] ANSI_COLOR="0;31"
[2025-11-27 00:05:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:05:44] HOME_URL="https://www.centos.org/"
[2025-11-27 00:05:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:05:44] 
[2025-11-27 00:05:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:05:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:05:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:05:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:05:44] 
[2025-11-27 00:05:44] 2025-11-26 23:05:10,288 | INFO     | ***************************************
[2025-11-27 00:05:44] 2025-11-26 23:05:10,791 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 00:05:44] 2025-11-26 23:05:10,965 | INFO     | sufficient remaining disk space (495368273920 B)
[2025-11-27 00:05:44] 2025-11-26 23:05:10,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:05:44] 2025-11-26 23:05:10,966 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:05:44] 2025-11-26 23:05:10,966 | INFO     | update_server=False
[2025-11-27 00:05:44] 2025-11-26 23:05:10,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:05:44] 2025-11-26 23:05:11,845 | INFO     | all data control threads have been joined
[2025-11-27 00:05:44] 2025-11-26 23:05:11,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:05:44] 2025-11-26 23:05:11,925 | INFO     | aborting loop
[2025-11-27 00:05:44] 2025-11-26 23:05:11,971 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:12,081 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:12,164 | INFO     | all job control threads have been joined
[2025-11-27 00:05:44] 2025-11-26 23:05:12,195 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:12,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:05:44] 2025-11-26 23:05:12,239 | INFO     | all payload control threads have been joined
[2025-11-27 00:05:44] 2025-11-26 23:05:12,372 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:12,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:05:44] 2025-11-26 23:05:12,691 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:12,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:05:44] 2025-11-26 23:05:12,850 | INFO     | [data] control thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:12,854 | INFO     | [job] validate thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:12,931 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:13,100 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:13,170 | INFO     | [job] control thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:13,231 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:13,245 | INFO     | [payload] control thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:13,305 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:13,785 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:14,450 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:16,230 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:05:44] 2025-11-26 23:05:24,128 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:05:44] 2025-11-26 23:05:25,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098891061056)>', '<ExcThread(monitor, started 140098452571904)>']
[2025-11-27 00:05:44] 2025-11-26 23:05:30,219 | INFO     | all workflow threads have been joined
[2025-11-27 00:05:44] 2025-11-26 23:05:30,220 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:05:44] 2025-11-26 23:05:30,220 | INFO     | traces error code: 0
[2025-11-27 00:05:44] 2025-11-26 23:05:30,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:05:44] 2025-11-26 23:05:39,734 | INFO     | PID=1183 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 00:05:44] 2025-11-26 23:05:39,735 | INFO     | .. there are 9 such processes running
[2025-11-27 00:05:44] 2025-11-26 23:05:39,736 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:05:44] 2025-11-26 23:05:39,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:05:44] 2025-11-26 23:05:39,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:05:44] 2025-11-26 23:05:39,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:05:44] 2025-11-26 23:05:39,736 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 00:05:44] 2025-11-26 23:05:39,736 | INFO     | [monitor] control thread has ended
[2025-11-27 00:05:44] 2025-11-26 23:05:39,980 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:05:44] 2025-11-26 23:05:40,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:05:44] 2025-11-26 23:05:40,163 [wrapper] pilotpid: 1183
[2025-11-27 00:05:44] 2025-11-26 23:05:40,261 [wrapper] Pilot exit status: 0
[2025-11-27 00:05:44] 2025-11-26 23:05:40,658 [wrapper] pandaids: 6895339654
[2025-11-27 00:05:44] 2025-11-26 23:05:41,397 [wrapper] cleanup supervisor_pilot 15195 1184
[2025-11-27 00:05:44] 2025-11-26 23:05:41,446 [wrapper] Test setup, not cleaning
[2025-11-27 00:05:44] 2025-11-26 23:05:41,581 [wrapper] apfmon messages muted
[2025-11-27 00:05:44] 2025-11-26 23:05:41,673 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:05:44] 2025-11-26 23:05:41,725 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:05:44]  *** Error codes and diagnostics ***
[2025-11-27 00:05:44]     "exeErrorCode": 0,
[2025-11-27 00:05:44]     "exeErrorDiag": "",
[2025-11-27 00:05:44]     "pilotErrorCode": 0,
[2025-11-27 00:05:44]     "pilotErrorDiag": "",
[2025-11-27 00:05:44]  *** Listing of results directory ***
[2025-11-27 00:05:44] total 1318956
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc    576529 Nov 22 11:57 pilot3.tar.gz
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc      5112 Nov 22 12:04 queuedata.json
[2025-11-27 00:05:44] -rwx------. 1 boinc boinc     36292 Nov 22 12:05 runpilot2-wrapper.sh
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc       100 Nov 26 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:05:44] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 01:04 run_atlas
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc       105 Nov 26 01:04 job.xml
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc      6390 Nov 26 01:04 init_data.xml
[2025-11-27 00:05:44] -rw-r--r--. 2 boinc boinc 409841417 Nov 26 01:04 EVNT.47483658._000355.pool.root.1
[2025-11-27 00:05:44] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:04 start_atlas.sh
[2025-11-27 00:05:44] drwxrwx--x. 2 boinc boinc        68 Nov 26 01:04 shared
[2025-11-27 00:05:44] -rw-r--r--. 2 boinc boinc    590101 Nov 26 01:04 input.tar.gz
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc         0 Nov 26 01:04 boinc_lockfile
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc      2782 Nov 26 01:05 pandaJob.out
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc    991877 Nov 26 01:08 agis_schedconf.cvmfs.json
[2025-11-27 00:05:44] drwx------. 5 boinc boinc      4096 Nov 26 01:08 pilot3
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc       533 Nov 26 23:52 boinc_task_state.xml
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc 910095626 Nov 27 00:02 HITS.47556137._003511.pool.root.1
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc      1033 Nov 27 00:03 memory_monitor_summary.json
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc   1516240 Nov 27 00:03 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc   2429095 Nov 27 00:03 log.47556137._003511.job.log.tgz.1
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc      8625 Nov 27 00:05 heartbeat.json
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc      8192 Nov 27 00:05 boinc_mmap_file
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc        29 Nov 27 00:05 wrapper_checkpoint.txt
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc        95 Nov 27 00:05 pilot_heartbeat.json
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc       889 Nov 27 00:05 pilotlog.txt
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc  10955270 Nov 27 00:05 log.47556137._003511.job.log.1
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc       353 Nov 27 00:05 output.list
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc       620 Nov 27 00:05 runtime_log
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc  13404160 Nov 27 00:05 result.tar.gz
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc      8817 Nov 27 00:05 runtime_log.err
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc       662 Nov 27 00:05 3JPODmQc0g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT5HKDmwTQxEm.diag
[2025-11-27 00:05:44] -rw-r--r--. 1 boinc boinc     20955 Nov 27 00:05 stderr.txt
[2025-11-27 00:05:44] HITS file was successfully produced:
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc 910095626 Nov 27 00:02 shared/HITS.pool.root.1
[2025-11-27 00:05:44]  *** Contents of shared directory: ***
[2025-11-27 00:05:44] total 1302692
[2025-11-27 00:05:44] -rw-r--r--. 2 boinc boinc 409841417 Nov 26 01:04 ATLAS.root_0
[2025-11-27 00:05:44] -rw-r--r--. 2 boinc boinc     15847 Nov 26 01:04 start_atlas.sh
[2025-11-27 00:05:44] -rw-r--r--. 2 boinc boinc    590101 Nov 26 01:04 input.tar.gz
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc 910095626 Nov 27 00:02 HITS.pool.root.1
[2025-11-27 00:05:44] -rw-------. 1 boinc boinc  13404160 Nov 27 00:05 result.tar.gz
00:05:45 (29789): run_atlas exited; CPU time 313132.388971
00:05:45 (29789): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN