Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:42 (14099): wrapper (7.7.26015): starting
04:32:42 (14099): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 04:32:42] Arguments: --nthreads 8
[2025-11-26 04:32:42] Threads: 8
[2025-11-26 04:32:42] Checking for CVMFS
[2025-11-26 04:32:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:32:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:32:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:32:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:32:45] 2.11.2.0 1477 189951 135756 153307 2 84 20206847 25165824 1706 130560 13 64808041 99.877 32161258 2327 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 04:32:45] CVMFS is ok
[2025-11-26 04:32:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:32:45] Checking for apptainer binary...
[2025-11-26 04:32:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:32:45] Running /usr/bin/apptainer --version
[2025-11-26 04:32:45] apptainer version 1.3.2-1.el7
[2025-11-26 04:32:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:32:54] cg-vwn317.simple-grid.lan
[2025-11-26 04:32:54] apptainer works
[2025-11-26 04:32:54] Set ATHENA_PROC_NUMBER=8
[2025-11-26 04:32:54] Set ATHENA_CORE_NUMBER=8
[2025-11-26 04:32:54] Starting ATLAS job with PandaID=6895333037
[2025-11-26 04:32:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:56:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:56:06] 2025-11-27 03:55:05,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:56:06] 2025-11-27 03:55:07,311 | INFO     | time since job start (87524s) is within the limit (172800.0s)
[2025-11-27 04:56:06] 2025-11-27 03:55:08,236 | INFO     | monitor loop #5895: job 0:6895333037 is in state 'finished'
[2025-11-27 04:56:06] 2025-11-27 03:55:08,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:56:06] 2025-11-27 03:55:09,319 | INFO     | time since job start (87526s) is within the limit (172800.0s)
[2025-11-27 04:56:06] 2025-11-27 03:55:10,740 | INFO     | monitor loop #5896: job 0:6895333037 is in state 'finished'
[2025-11-27 04:56:06] 2025-11-27 03:55:10,740 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:56:06] 2025-11-27 03:55:10,957 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 04:56:06] 2025-11-27 03:55:10,958 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 04:56:06] 2025-11-27 03:55:10,960 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6895333037/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:56:06] 2025-11-27 03:55:10,960 | INFO     | extracted standard info from prmon json
[2025-11-27 04:56:06] 2025-11-27 03:55:10,961 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:56:06] 2025-11-27 03:55:10,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:56:06] 2025-11-27 03:55:10,989 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:56:06] 2025-11-27 03:55:10,997 | INFO     | sum of square deviations: 897268075836.7535
[2025-11-27 04:56:06] 2025-11-27 03:55:11,084 | INFO     | sum of deviations: 3564770617130.7876
[2025-11-27 04:56:06] 2025-11-27 03:55:11,085 | INFO     | mean x: 1764172122.1221054
[2025-11-27 04:56:06] 2025-11-27 03:55:11,085 | INFO     | mean y: 2856201.9150877194
[2025-11-27 04:56:06] 2025-11-27 03:55:11,085 | INFO     | intersect: -7006051296.144978
[2025-11-27 04:56:06] 2025-11-27 03:55:11,087 | INFO     | chi2: 16.721082047659664
[2025-11-27 04:56:06] 2025-11-27 03:55:11,089 | INFO     | sum of square deviations: 887856721940.4352
[2025-11-27 04:56:06] 2025-11-27 03:55:11,167 | INFO     | sum of deviations: 4021323483590.2046
[2025-11-27 04:56:06] 2025-11-27 03:55:11,168 | INFO     | mean x: 1764171969.6260564
[2025-11-27 04:56:06] 2025-11-27 03:55:11,168 | INFO     | mean y: 2863600.61056338
[2025-11-27 04:56:06] 2025-11-27 03:55:11,168 | INFO     | intersect: -7987509164.765414
[2025-11-27 04:56:06] 2025-11-27 03:55:11,170 | INFO     | chi2: 13.77951117312541
[2025-11-27 04:56:06] 2025-11-27 03:55:11,170 | INFO     | current chi2=13.77951117312541 (change=17.59198876095441 %)
[2025-11-27 04:56:06] 2025-11-27 03:55:11,170 | INFO     | right removable region: 1419
[2025-11-27 04:56:06] 2025-11-27 03:55:11,177 | INFO     | sum of square deviations: 887855746550.4354
[2025-11-27 04:56:06] 2025-11-27 03:55:11,238 | INFO     | sum of deviations: 2993718398974.985
[2025-11-27 04:56:06] 2025-11-27 03:55:11,238 | INFO     | mean x: 1764172274.6260564
[2025-11-27 04:56:06] 2025-11-27 03:55:11,238 | INFO     | mean y: 2865453.0112676057
[2025-11-27 04:56:06] 2025-11-27 03:55:11,238 | INFO     | intersect: -5945662805.13135
[2025-11-27 04:56:06] 2025-11-27 03:55:11,240 | INFO     | chi2: 12.488787865866279
[2025-11-27 04:56:06] 2025-11-27 03:55:11,240 | INFO     | current chi2=12.488787865866279 (change=25.31112621617541 %)
[2025-11-27 04:56:06] 2025-11-27 03:55:11,242 | INFO     | sum of square deviations: 878509465014.0774
[2025-11-27 04:56:06] 2025-11-27 03:55:11,298 | INFO     | sum of deviations: 2522551530120.4805
[2025-11-27 04:56:06] 2025-11-27 03:55:11,299 | INFO     | mean x: 1764172427.1300354
[2025-11-27 04:56:06] 2025-11-27 03:55:11,299 | INFO     | mean y: 2873140.2473498234
[2025-11-27 04:56:06] 2025-11-27 03:55:11,299 | INFO     | intersect: -5062770467.111987
[2025-11-27 04:56:06] 2025-11-27 03:55:11,301 | INFO     | chi2: 9.707571013504264
[2025-11-27 04:56:06] 2025-11-27 03:55:11,301 | INFO     | current chi2=9.707571013504264 (change=22.269710097034277 %)
[2025-11-27 04:56:06] 2025-11-27 03:55:11,301 | INFO     | left removable region: 20
[2025-11-27 04:56:06] 2025-11-27 03:55:11,303 | INFO     | sum of square deviations: 849044438704.9246
[2025-11-27 04:56:06] 2025-11-27 03:55:11,353 | INFO     | time since job start (87528s) is within the limit (172800.0s)
[2025-11-27 04:56:06] 2025-11-27 03:55:11,353 | INFO     | 87532s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 04:56:06] 2025-11-27 03:55:11,364 | INFO     | sum of deviations: 2823785669960.8613
[2025-11-27 04:56:06] 2025-11-27 03:55:11,365 | INFO     | mean x: 1764172549.136526
[2025-11-27 04:56:06] 2025-11-27 03:55:11,365 | INFO     | mean y: 2887135.8227305217
[2025-11-27 04:56:06] 2025-11-27 03:55:11,365 | INFO     | intersect: -5864467900.609419
[2025-11-27 04:56:06] 2025-11-27 03:55:11,367 | INFO     | chi2: 5.289876279572176
[2025-11-27 04:56:06] 2025-11-27 03:55:11,367 | INFO     | current memory leak: 3.33 B/s (using 1399 data points, chi2=5.29)
[2025-11-27 04:56:06] 2025-11-27 03:55:11,369 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-27 04:56:06] 2025-11-27 03:55:11,369 | INFO     | ..............................
[2025-11-27 04:56:06] 2025-11-27 03:55:11,369 | INFO     | . Timing measurements:
[2025-11-27 04:56:06] 2025-11-27 03:55:11,369 | INFO     | . get job = 0 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,369 | INFO     | . initial setup = 3 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,369 | INFO     | . payload setup = 172 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,369 | INFO     | . stage-in = 0 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,370 | INFO     | . payload execution = 87066 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,370 | INFO     | . stage-out = 5 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,370 | INFO     | . log creation = 2 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,370 | INFO     | ..............................
[2025-11-27 04:56:06] 2025-11-27 03:55:11,815 | INFO     | 
[2025-11-27 04:56:06] 2025-11-27 03:55:11,815 | INFO     | job summary report
[2025-11-27 04:56:06] 2025-11-27 03:55:11,815 | INFO     | --------------------------------------------------
[2025-11-27 04:56:06] 2025-11-27 03:55:11,815 | INFO     | PanDA job id: 6895333037
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | task id: 47556137
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | errors: (none)
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | pilot state: finished 
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | transexitcode: 0
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | exeerrorcode: 0
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | exeerrordiag: 
[2025-11-27 04:56:06] 2025-11-27 03:55:11,816 | INFO     | exitcode: 0
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | exitmsg: OK
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | cpuconsumptiontime: 329834 s
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | nevents: 1000
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | neventsw: 0
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | pid: 24449
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | pgrp: 24449
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | corecount: 8
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | event service: False
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | sizes: {0: 2284259, 1: 2284259, 11: 2284287, 22: 2284315, 33: 2284343, 44: 2284399, 54: 2284555, 65: 2284583, 76: 2284611, 82: 2284929, 87: 2284985, 87243: 2347779
[2025-11-27 04:56:06] 2025-11-27 03:55:11,817 | INFO     | --------------------------------------------------
[2025-11-27 04:56:06] 2025-11-27 03:55:11,818 | INFO     | 
[2025-11-27 04:56:06] 2025-11-27 03:55:11,818 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-27 04:56:06] 2025-11-27 03:55:12,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:56:06] 2025-11-27 03:55:12,236 | INFO     | job 6895333037 has completed (purged errors)
[2025-11-27 04:56:06] 2025-11-27 03:55:12,237 | INFO     | overall cleanup function is called
[2025-11-27 04:56:06] 2025-11-27 03:55:13,257 | INFO     | --- collectZombieJob: --- 10, [24449]
[2025-11-27 04:56:06] 2025-11-27 03:55:13,257 | INFO     | zombie collector waiting for pid 24449
[2025-11-27 04:56:06] 2025-11-27 03:55:13,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:56:06] 2025-11-27 03:55:13,257 | INFO     | collected zombie processes
[2025-11-27 04:56:06] 2025-11-27 03:55:13,257 | INFO     | will attempt to kill all subprocesses of pid=24449
[2025-11-27 04:56:06] 2025-11-27 03:55:13,364 | INFO     | process IDs to be killed: [24449] (in reverse order)
[2025-11-27 04:56:06] 2025-11-27 03:55:13,877 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:56:06] 2025-11-27 03:55:13,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:56:06] 2025-11-27 03:55:13,880 | INFO     | did not find any defunct processes belonging to 24449
[2025-11-27 04:56:06] 2025-11-27 03:55:13,882 | INFO     | did not find any defunct processes belonging to 24449
[2025-11-27 04:56:06] 2025-11-27 03:55:13,892 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:56:06] 2025-11-27 03:55:13,893 | INFO     | ready for new job
[2025-11-27 04:56:06] 2025-11-27 03:55:13,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:56:06] 2025-11-27 03:55:13,898 | INFO     | ***************************************
[2025-11-27 04:56:06] 2025-11-27 03:55:13,898 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:56:06] 2025-11-27 03:55:13,898 | INFO     | ***************************************
[2025-11-27 04:56:06] 2025-11-27 03:55:13,898 | INFO     | 
[2025-11-27 04:56:06] 2025-11-27 03:55:13,899 | INFO     | pilot is running in a VM
[2025-11-27 04:56:06] 2025-11-27 03:55:13,899 | INFO     | architecture information:
[2025-11-27 04:56:06] 2025-11-27 03:55:13,905 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:56:06] 2025-11-27 03:55:14,007 | INFO     | cat /etc/os-release:
[2025-11-27 04:56:06] NAME="CentOS Linux"
[2025-11-27 04:56:06] VERSION="7 (Core)"
[2025-11-27 04:56:06] ID="centos"
[2025-11-27 04:56:06] ID_LIKE="rhel fedora"
[2025-11-27 04:56:06] VERSION_ID="7"
[2025-11-27 04:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:56:06] ANSI_COLOR="0;31"
[2025-11-27 04:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:56:06] HOME_URL="https://www.centos.org/"
[2025-11-27 04:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:56:06] 
[2025-11-27 04:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:56:06] 
[2025-11-27 04:56:06] 2025-11-27 03:55:14,008 | INFO     | ***************************************
[2025-11-27 04:56:06] 2025-11-27 03:55:14,511 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-27 04:56:06] 2025-11-27 03:55:14,760 | INFO     | sufficient remaining disk space (495369322496 B)
[2025-11-27 04:56:06] 2025-11-27 03:55:14,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:56:06] 2025-11-27 03:55:14,760 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:56:06] 2025-11-27 03:55:14,760 | INFO     | update_server=False
[2025-11-27 04:56:06] 2025-11-27 03:55:14,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:56:06] 2025-11-27 03:55:14,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:56:06] 2025-11-27 03:55:14,761 | INFO     | aborting loop
[2025-11-27 04:56:06] 2025-11-27 03:55:14,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:56:06] 2025-11-27 03:55:15,438 | INFO     | all data control threads have been joined
[2025-11-27 04:56:06] 2025-11-27 03:55:15,701 | INFO     | all payload control threads have been joined
[2025-11-27 04:56:06] 2025-11-27 03:55:15,766 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:15,767 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:15,812 | INFO     | [job] validate thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:56:06] 2025-11-27 03:55:16,150 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,272 | INFO     | all job control threads have been joined
[2025-11-27 04:56:06] 2025-11-27 03:55:16,444 | INFO     | [data] control thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,445 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:56:06] 2025-11-27 03:55:16,529 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,548 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,707 | INFO     | [payload] control thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,765 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,771 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:16,971 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:17,278 | INFO     | [job] control thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:17,535 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:20,029 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:56:06] 2025-11-27 03:55:44,529 | INFO     | PID=17914 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 04:56:06] 2025-11-27 03:55:44,529 | INFO     | .. there are 9 such processes running
[2025-11-27 04:56:06] 2025-11-27 03:55:44,534 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:56:06] 2025-11-27 03:55:44,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:56:06] 2025-11-27 03:55:44,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:56:06] 2025-11-27 03:55:55,511 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:56:06] 2025-11-27 03:55:56,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094989834048)>', '<ExcThread(monitor, started 140094543472384)>']
[2025-11-27 04:56:06] 2025-11-27 03:55:57,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:56:06] 2025-11-27 03:55:57,612 | INFO     | [monitor] control thread has ended
[2025-11-27 04:56:06] 2025-11-27 03:56:01,874 | INFO     | all workflow threads have been joined
[2025-11-27 04:56:06] 2025-11-27 03:56:01,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:56:06] 2025-11-27 03:56:01,874 | INFO     | traces error code: 0
[2025-11-27 04:56:06] 2025-11-27 03:56:01,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:56:06] 2025-11-27 03:56:02,235 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:56:06] 2025-11-27 03:56:02,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:56:06] 2025-11-27 03:56:02,388 [wrapper] pilotpid: 17914
[2025-11-27 04:56:06] 2025-11-27 03:56:02,477 [wrapper] Pilot exit status: 0
[2025-11-27 04:56:06] 2025-11-27 03:56:02,547 [wrapper] pandaids: 6895333037
[2025-11-27 04:56:06] 2025-11-27 03:56:03,556 [wrapper] cleanup supervisor_pilot 15751 17915
[2025-11-27 04:56:06] 2025-11-27 03:56:03,626 [wrapper] Test setup, not cleaning
[2025-11-27 04:56:06] 2025-11-27 03:56:03,695 [wrapper] apfmon messages muted
[2025-11-27 04:56:06] 2025-11-27 03:56:03,798 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:56:06] 2025-11-27 03:56:03,877 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:56:06]  *** Error codes and diagnostics ***
[2025-11-27 04:56:06]     "exeErrorCode": 0,
[2025-11-27 04:56:06]     "exeErrorDiag": "",
[2025-11-27 04:56:06]     "pilotErrorCode": 0,
[2025-11-27 04:56:06]     "pilotErrorDiag": "",
[2025-11-27 04:56:06]  *** Listing of results directory ***
[2025-11-27 04:56:06] total 1336200
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc    576529 Nov 22 01:28 pilot3.tar.gz
[2025-11-27 04:56:06] -rwx------. 1 boinc boinc     36292 Nov 22 01:37 runpilot2-wrapper.sh
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc      5112 Nov 22 01:37 queuedata.json
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc       100 Nov 26 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:56:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 04:32 run_atlas
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc       105 Nov 26 04:32 job.xml
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc      6391 Nov 26 04:32 init_data.xml
[2025-11-27 04:56:06] -rw-r--r--. 2 boinc boinc 410423866 Nov 26 04:32 EVNT.47483658._000196.pool.root.1
[2025-11-27 04:56:06] -rw-r--r--. 2 boinc boinc     15847 Nov 26 04:32 start_atlas.sh
[2025-11-27 04:56:06] drwxrwx--x. 2 boinc boinc        68 Nov 26 04:32 shared
[2025-11-27 04:56:06] -rw-r--r--. 2 boinc boinc    590095 Nov 26 04:32 input.tar.gz
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc         0 Nov 26 04:32 boinc_lockfile
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc      2782 Nov 26 04:32 pandaJob.out
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc    991877 Nov 26 04:36 agis_schedconf.cvmfs.json
[2025-11-27 04:56:06] drwx------. 5 boinc boinc      4096 Nov 26 04:36 pilot3
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc       533 Nov 27 04:35 boinc_task_state.xml
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc 925654970 Nov 27 04:52 HITS.47556137._001941.pool.root.1
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc      1029 Nov 27 04:53 memory_monitor_summary.json
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc   1516240 Nov 27 04:53 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc   2495633 Nov 27 04:53 log.47556137._001941.job.log.tgz.1
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc      8622 Nov 27 04:55 heartbeat.json
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc        29 Nov 27 04:55 wrapper_checkpoint.txt
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc      8192 Nov 27 04:55 boinc_mmap_file
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc        95 Nov 27 04:55 pilot_heartbeat.json
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc      4885 Nov 27 04:56 pilotlog.txt
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc  11644592 Nov 27 04:56 log.47556137._001941.job.log.1
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc       353 Nov 27 04:56 output.list
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc       620 Nov 27 04:56 runtime_log
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc  14161920 Nov 27 04:56 result.tar.gz
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc       662 Nov 27 04:56 uv0LDmaoqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5sHKDmuG7KHn.diag
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc      8833 Nov 27 04:56 runtime_log.err
[2025-11-27 04:56:06] -rw-r--r--. 1 boinc boinc     21245 Nov 27 04:56 stderr.txt
[2025-11-27 04:56:06] HITS file was successfully produced:
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc 925654970 Nov 27 04:52 shared/HITS.pool.root.1
[2025-11-27 04:56:06]  *** Contents of shared directory: ***
[2025-11-27 04:56:06] total 1319196
[2025-11-27 04:56:06] -rw-r--r--. 2 boinc boinc 410423866 Nov 26 04:32 ATLAS.root_0
[2025-11-27 04:56:06] -rw-r--r--. 2 boinc boinc     15847 Nov 26 04:32 start_atlas.sh
[2025-11-27 04:56:06] -rw-r--r--. 2 boinc boinc    590095 Nov 26 04:32 input.tar.gz
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc 925654970 Nov 27 04:52 HITS.pool.root.1
[2025-11-27 04:56:06] -rw-------. 1 boinc boinc  14161920 Nov 27 04:56 result.tar.gz
04:56:08 (14099): run_atlas exited; CPU time 330449.132007
04:56:08 (14099): called boinc_finish(0)

</stderr_txt>
]]>

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