Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:33:05 (1186716): wrapper (7.7.26015): starting
05:33:05 (1186716): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 05:33:05] Arguments: --nthreads 8
[2025-11-23 05:33:05] Threads: 8
[2025-11-23 05:33:05] Checking for CVMFS
[2025-11-23 05:33:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 05:33:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 05:33:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 05:33:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 05:33:05] 2.10.1.0 4440 247436 180048 153205 1 81 15330184 18432000 3769 130560 2 273571897 99.989 9570343 6409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-23 05:33:05] CVMFS is ok
[2025-11-23 05:33:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 05:33:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 05:33:05] Further information can be found at the LHC@home message board.
[2025-11-23 05:33:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 05:33:05] Checking for apptainer binary...
[2025-11-23 05:33:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 05:33:05] Running /usr/bin/apptainer --version
[2025-11-23 05:33:05] apptainer version 1.1.9-1.el8
[2025-11-23 05:33:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 05:33:06] c-16-31.aglt2.org
[2025-11-23 05:33:06] apptainer works
[2025-11-23 05:33:06] Set ATHENA_PROC_NUMBER=8
[2025-11-23 05:33:06] Set ATHENA_CORE_NUMBER=8
[2025-11-23 05:33:06] Starting ATLAS job with PandaID=6893876805
[2025-11-23 05:33:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:19:06]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:19:06] 2025-11-24 03:18:24,972 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-23 22:19:06] 2025-11-24 03:18:24,972 | INFO     | log transfer has been attempted: DONE
[2025-11-23 22:19:06] 2025-11-24 03:18:24,973 | INFO     | job 6893876805 has finished - writing final server update
[2025-11-23 22:19:06] 2025-11-24 03:18:24,973 | INFO     | total number of processed events: 1000 (read)
[2025-11-23 22:19:06] 2025-11-24 03:18:24,974 | INFO     | executing command: lscpu
[2025-11-23 22:19:06] 2025-11-24 03:18:25,035 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 22:19:06] 2025-11-24 03:18:25,608 | WARNING  | process 1211080 can no longer be monitored (due to stat problems) - aborting
[2025-11-23 22:19:06] 2025-11-24 03:18:25,609 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893876805/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:19:06] 2025-11-24 03:18:25,924 | INFO     | number of running child processes to parent process 1211080: 1
[2025-11-23 22:19:06] 2025-11-24 03:18:25,925 | INFO     | maximum number of monitored processes: 16
[2025-11-23 22:19:06] 2025-11-24 03:18:25,947 | INFO     | time since job start (60308s) is within the limit (172800.0s)
[2025-11-23 22:19:06] 2025-11-24 03:18:27,952 | INFO     | time since job start (60310s) is within the limit (172800.0s)
[2025-11-23 22:19:06] 2025-11-24 03:18:28,428 | INFO     | monitor loop #4331: job 0:6893876805 is in state 'finished'
[2025-11-23 22:19:06] 2025-11-24 03:18:28,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:19:06] 2025-11-24 03:18:29,958 | INFO     | time since job start (60312s) is within the limit (172800.0s)
[2025-11-23 22:19:06] 2025-11-24 03:18:30,401 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 22:19:06] 2025-11-24 03:18:30,411 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2959.8611499999997
[2025-11-23 22:19:06] 2025-11-24 03:18:30,418 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893876805/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:19:06] 2025-11-24 03:18:30,419 | INFO     | extracted standard info from prmon json
[2025-11-23 22:19:06] 2025-11-24 03:18:30,419 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:19:06] 2025-11-24 03:18:30,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:19:06] 2025-11-24 03:18:30,445 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:19:06] 2025-11-24 03:18:30,447 | INFO     | sum of square deviations: 299960113942.7582
[2025-11-23 22:19:06] 2025-11-24 03:18:30,478 | INFO     | sum of deviations: 12694936279002.89
[2025-11-23 22:19:06] 2025-11-24 03:18:30,478 | INFO     | mean x: 1763924158.0728009
[2025-11-23 22:19:06] 2025-11-24 03:18:30,479 | INFO     | mean y: 3331944.6541961576
[2025-11-23 22:19:06] 2025-11-24 03:18:30,479 | INFO     | intersect: -74649609386.07652
[2025-11-23 22:19:06] 2025-11-24 03:18:30,480 | INFO     | chi2: 45.78617717960298
[2025-11-23 22:19:06] 2025-11-24 03:18:30,482 | INFO     | sum of square deviations: 295433613822.7316
[2025-11-23 22:19:06] 2025-11-24 03:18:30,511 | INFO     | sum of deviations: 13054850402909.83
[2025-11-23 22:19:06] 2025-11-24 03:18:30,512 | INFO     | mean x: 1763924005.5731707
[2025-11-23 22:19:06] 2025-11-24 03:18:30,512 | INFO     | mean y: 3344062.9329268294
[2025-11-23 22:19:06] 2025-11-24 03:18:30,512 | INFO     | intersect: -77942302395.1459
[2025-11-23 22:19:06] 2025-11-24 03:18:30,514 | INFO     | chi2: 42.89297809579355
[2025-11-23 22:19:06] 2025-11-24 03:18:30,514 | INFO     | current chi2=42.89297809579355 (change=6.318935674538697 %)
[2025-11-23 22:19:06] 2025-11-24 03:18:30,514 | INFO     | right removable region: 983
[2025-11-23 22:19:06] 2025-11-24 03:18:30,515 | INFO     | sum of square deviations: 295433569902.7315
[2025-11-23 22:19:06] 2025-11-24 03:18:30,546 | INFO     | sum of deviations: 12376508101013.273
[2025-11-23 22:19:06] 2025-11-24 03:18:30,546 | INFO     | mean x: 1763924310.5731707
[2025-11-23 22:19:06] 2025-11-24 03:18:30,547 | INFO     | mean y: 3342661.5101626017
[2025-11-23 22:19:06] 2025-11-24 03:18:30,547 | INFO     | intersect: -73892198480.178
[2025-11-23 22:19:06] 2025-11-24 03:18:30,548 | INFO     | chi2: 43.85118724307461
[2025-11-23 22:19:06] 2025-11-24 03:18:30,548 | INFO     | current chi2=43.85118724307461 (change=4.2261443425121215 %)
[2025-11-23 22:19:06] 2025-11-24 03:18:30,549 | INFO     | left removable region: 10
[2025-11-23 22:19:06] 2025-11-24 03:18:30,550 | INFO     | sum of square deviations: 285636002686.672
[2025-11-23 22:19:06] 2025-11-24 03:18:30,579 | INFO     | sum of deviations: 12627411851299.158
[2025-11-23 22:19:06] 2025-11-24 03:18:30,580 | INFO     | mean x: 1763924280.073998
[2025-11-23 22:19:06] 2025-11-24 03:18:30,580 | INFO     | mean y: 3359859.108941418
[2025-11-23 22:19:06] 2025-11-24 03:18:30,580 | INFO     | intersect: -77976300090.94975
[2025-11-23 22:19:06] 2025-11-24 03:18:30,581 | INFO     | chi2: 40.78989121130153
[2025-11-23 22:19:06] 2025-11-24 03:18:30,582 | INFO     | current memory leak: 44.21 B/s (using 973 data points, chi2=40.79)
[2025-11-23 22:19:06] 2025-11-24 03:18:30,583 | INFO     | could have reported an average CPU frequency of 2910 MHz (37 samples)
[2025-11-23 22:19:06] 2025-11-24 03:18:30,583 | INFO     | ..............................
[2025-11-23 22:19:06] 2025-11-24 03:18:30,583 | INFO     | . Timing measurements:
[2025-11-23 22:19:06] 2025-11-24 03:18:30,583 | INFO     | . get job = 0 s
[2025-11-23 22:19:06] 2025-11-24 03:18:30,583 | INFO     | . initial setup = 2 s
[2025-11-23 22:19:06] 2025-11-24 03:18:30,584 | INFO     | . payload setup = 6 s
[2025-11-23 22:19:06] 2025-11-24 03:18:30,584 | INFO     | . stage-in = 0 s
[2025-11-23 22:19:06] 2025-11-24 03:18:30,584 | INFO     | . payload execution = 60276 s
[2025-11-23 22:19:06] 2025-11-24 03:18:30,584 | INFO     | . stage-out = 3 s
[2025-11-23 22:19:06] 2025-11-24 03:18:30,584 | INFO     | . log creation = 0 s
[2025-11-23 22:19:06] 2025-11-24 03:18:30,584 | INFO     | ..............................
[2025-11-23 22:19:06] 2025-11-24 03:18:31,026 | INFO     | 
[2025-11-23 22:19:06] 2025-11-24 03:18:31,026 | INFO     | job summary report
[2025-11-23 22:19:06] 2025-11-24 03:18:31,026 | INFO     | --------------------------------------------------
[2025-11-23 22:19:06] 2025-11-24 03:18:31,026 | INFO     | PanDA job id: 6893876805
[2025-11-23 22:19:06] 2025-11-24 03:18:31,027 | INFO     | task id: 47523449
[2025-11-23 22:19:06] 2025-11-24 03:18:31,027 | INFO     | errors: (none)
[2025-11-23 22:19:06] 2025-11-24 03:18:31,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:19:06] 2025-11-24 03:18:31,027 | INFO     | pilot state: finished 
[2025-11-23 22:19:06] 2025-11-24 03:18:31,027 | INFO     | transexitcode: 0
[2025-11-23 22:19:06] 2025-11-24 03:18:31,027 | INFO     | exeerrorcode: 0
[2025-11-23 22:19:06] 2025-11-24 03:18:31,028 | INFO     | exeerrordiag: 
[2025-11-23 22:19:06] 2025-11-24 03:18:31,028 | INFO     | exitcode: 0
[2025-11-23 22:19:06] 2025-11-24 03:18:31,028 | INFO     | exitmsg: OK
[2025-11-23 22:19:06] 2025-11-24 03:18:31,028 | INFO     | cpuconsumptiontime: 473348 s
[2025-11-23 22:19:06] 2025-11-24 03:18:31,028 | INFO     | nevents: 1000
[2025-11-23 22:19:06] 2025-11-24 03:18:31,028 | INFO     | neventsw: 0
[2025-11-23 22:19:06] 2025-11-24 03:18:31,029 | INFO     | pid: 1211080
[2025-11-23 22:19:06] 2025-11-24 03:18:31,029 | INFO     | pgrp: 1211080
[2025-11-23 22:19:06] 2025-11-24 03:18:31,029 | INFO     | corecount: 8
[2025-11-23 22:19:06] 2025-11-24 03:18:31,029 | INFO     | event service: False
[2025-11-23 22:19:06] 2025-11-24 03:18:31,029 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 60286: 2351509, 60287: 2351508, 60292: 2360742, 60297: 2360932}
[2025-11-23 22:19:06] 2025-11-24 03:18:31,029 | INFO     | --------------------------------------------------
[2025-11-23 22:19:06] 2025-11-24 03:18:31,029 | INFO     | 
[2025-11-23 22:19:06] 2025-11-24 03:18:31,030 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-23 22:19:06] 2025-11-24 03:18:31,049 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,050 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,050 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,050 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,051 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,052 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:19:06] 2025-11-24 03:18:31,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,053 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:19:06] 2025-11-24 03:18:31,053 | INFO     | job 6893876805 has completed (purged errors)
[2025-11-23 22:19:06] 2025-11-24 03:18:31,053 | INFO     | overall cleanup function is called
[2025-11-23 22:19:06] 2025-11-24 03:18:32,071 | INFO     | --- collectZombieJob: --- 10, [1211080]
[2025-11-23 22:19:06] 2025-11-24 03:18:32,071 | INFO     | zombie collector waiting for pid 1211080
[2025-11-23 22:19:06] 2025-11-24 03:18:32,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:19:06] 2025-11-24 03:18:32,071 | INFO     | collected zombie processes
[2025-11-23 22:19:06] 2025-11-24 03:18:32,071 | INFO     | will attempt to kill all subprocesses of pid=1211080
[2025-11-23 22:19:06] 2025-11-24 03:18:32,382 | INFO     | process IDs to be killed: [1211080] (in reverse order)
[2025-11-23 22:19:06] 2025-11-24 03:18:32,474 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:19:06] 2025-11-24 03:18:32,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:19:06] 2025-11-24 03:18:32,492 | INFO     | did not find any defunct processes belonging to 1211080
[2025-11-23 22:19:06] 2025-11-24 03:18:32,506 | INFO     | did not find any defunct processes belonging to 1211080
[2025-11-23 22:19:06] 2025-11-24 03:18:32,508 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:19:06] 2025-11-24 03:18:32,508 | INFO     | ready for new job
[2025-11-23 22:19:06] 2025-11-24 03:18:32,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:19:06] 2025-11-24 03:18:32,513 | INFO     | ***************************************
[2025-11-23 22:19:06] 2025-11-24 03:18:32,514 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:19:06] 2025-11-24 03:18:32,514 | INFO     | ***************************************
[2025-11-23 22:19:06] 2025-11-24 03:18:32,514 | INFO     | 
[2025-11-23 22:19:06] 2025-11-24 03:18:32,529 | INFO     | architecture information:
[2025-11-23 22:19:06] 2025-11-24 03:18:32,529 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:19:06] 2025-11-24 03:18:32,542 | INFO     | cat /etc/os-release:
[2025-11-23 22:19:06] NAME="CentOS Linux"
[2025-11-23 22:19:06] VERSION="7 (Core)"
[2025-11-23 22:19:06] ID="centos"
[2025-11-23 22:19:06] ID_LIKE="rhel fedora"
[2025-11-23 22:19:06] VERSION_ID="7"
[2025-11-23 22:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:19:06] ANSI_COLOR="0;31"
[2025-11-23 22:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:19:06] HOME_URL="https://www.centos.org/"
[2025-11-23 22:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:19:06] 
[2025-11-23 22:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:19:06] 
[2025-11-23 22:19:06] 2025-11-24 03:18:32,542 | INFO     | ***************************************
[2025-11-23 22:19:06] 2025-11-24 03:18:33,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-23 22:19:06] 2025-11-24 03:18:33,061 | INFO     | sufficient remaining disk space (99077849088 B)
[2025-11-23 22:19:06] 2025-11-24 03:18:33,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:19:06] 2025-11-24 03:18:33,061 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:19:06] 2025-11-24 03:18:33,062 | INFO     | update_server=False
[2025-11-23 22:19:06] 2025-11-24 03:18:33,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:19:06] 2025-11-24 03:18:33,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:19:06] 2025-11-24 03:18:33,292 | INFO     | all job control threads have been joined
[2025-11-23 22:19:06] 2025-11-24 03:18:33,327 | INFO     | all data control threads have been joined
[2025-11-23 22:19:06] 2025-11-24 03:18:33,451 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 22:19:06] 2025-11-24 03:18:33,451 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 22:19:06] 2025-11-24 03:18:33,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:19:06] 2025-11-24 03:18:33,452 | INFO     | will abort loop
[2025-11-23 22:19:06] 2025-11-24 03:18:34,067 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:34,089 | INFO     | all payload control threads have been joined
[2025-11-23 22:19:06] 2025-11-24 03:18:34,140 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:34,170 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:34,224 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:34,274 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:34,297 | INFO     | [job] control thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:34,332 | INFO     | [data] control thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:34,457 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:35,067 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:35,094 | INFO     | [payload] control thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:35,144 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:35,284 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:35,320 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:35,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:19:06] 2025-11-24 03:18:35,507 | INFO     | [job] validate thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:35,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:19:06] 2025-11-24 03:18:36,747 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:39,489 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:19:06] 2025-11-24 03:18:59,373 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:19:06] 2025-11-24 03:19:00,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587444651840)>', '<ExcThread(monitor, started 140587005101824)>']
[2025-11-23 22:19:06] 2025-11-24 03:19:03,417 | INFO     | PID=1193857 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 22:19:06] 2025-11-24 03:19:03,417 | INFO     | .. there are 5 such processes running
[2025-11-23 22:19:06] 2025-11-24 03:19:03,418 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:19:06] 2025-11-24 03:19:03,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:19:06] 2025-11-24 03:19:03,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:19:06] 2025-11-24 03:19:03,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:19:06] 2025-11-24 03:19:03,419 | INFO     | [monitor] control thread has ended
[2025-11-23 22:19:06] 2025-11-24 03:19:05,585 | INFO     | all workflow threads have been joined
[2025-11-23 22:19:06] 2025-11-24 03:19:05,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:19:06] 2025-11-24 03:19:05,585 | INFO     | traces error code: 0
[2025-11-23 22:19:06] 2025-11-24 03:19:05,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:19:06] 2025-11-24 03:19:05,688 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:19:06] 2025-11-24 03:19:05,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:19:06] 2025-11-24 03:19:05,692 [wrapper] pilotpid: 1193857
[2025-11-23 22:19:06] 2025-11-24 03:19:05,694 [wrapper] Pilot exit status: 0
[2025-11-23 22:19:06] 2025-11-24 03:19:05,700 [wrapper] pandaids: 6893876805
[2025-11-23 22:19:06] 2025-11-24 03:19:05,738 [wrapper] cleanup supervisor_pilot 1504353 1193858
[2025-11-23 22:19:06] 2025-11-24 03:19:05,740 [wrapper] Test setup, not cleaning
[2025-11-23 22:19:06] 2025-11-24 03:19:05,742 [wrapper] apfmon messages muted
[2025-11-23 22:19:06] 2025-11-24 03:19:05,743 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:19:06] 2025-11-24 03:19:05,745 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:19:06]  *** Error codes and diagnostics ***
[2025-11-23 22:19:06]     "exeErrorCode": 0,
[2025-11-23 22:19:06]     "exeErrorDiag": "",
[2025-11-23 22:19:06]     "pilotErrorCode": 0,
[2025-11-23 22:19:06]     "pilotErrorDiag": "",
[2025-11-23 22:19:06]  *** Listing of results directory ***
[2025-11-23 22:19:06] total 1310728
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 12:21 pilot3.tar.gz
[2025-11-23 22:19:06] -rwx------ 1 boincer umatlas     36292 Nov 20 12:48 runpilot2-wrapper.sh
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 12:48 queuedata.json
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas       100 Nov 23 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:19:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 05:33 run_atlas
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas       105 Nov 23 05:33 job.xml
[2025-11-23 22:19:06] -rw-r--r-- 2 boincer umatlas 411141124 Nov 23 05:33 EVNT.47493127._000775.pool.root.1
[2025-11-23 22:19:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:33 start_atlas.sh
[2025-11-23 22:19:06] drwxrwx--x 2 boincer umatlas      4096 Nov 23 05:33 shared
[2025-11-23 22:19:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 05:33 input.tar.gz
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas         0 Nov 23 05:33 boinc_lockfile
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 05:33 pandaJob.out
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas        57 Nov 23 05:33 setup.sh.local
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas    989784 Nov 23 05:33 agis_schedconf.cvmfs.json
[2025-11-23 22:19:06] drwx------ 5 boincer umatlas      4096 Nov 23 05:33 pilot3
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas       533 Nov 23 22:06 boinc_task_state.xml
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas      6014 Nov 23 22:10 init_data.xml
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas 905951289 Nov 23 22:17 HITS.47523449._007742.pool.root.1
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas      1065 Nov 23 22:18 memory_monitor_summary.json
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas   1526164 Nov 23 22:18 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas   2196030 Nov 23 22:18 log.47523449._007742.job.log.tgz.1
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas      8661 Nov 23 22:18 heartbeat.json
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 22:18 boinc_mmap_file
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas        29 Nov 23 22:18 wrapper_checkpoint.txt
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas        95 Nov 23 22:19 pilot_heartbeat.json
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas      5009 Nov 23 22:19 pilotlog.txt
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas   8387046 Nov 23 22:19 log.47523449._007742.job.log.1
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas       353 Nov 23 22:19 output.list
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas       620 Nov 23 22:19 runtime_log
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas  10598400 Nov 23 22:19 result.tar.gz
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 22:19 runtime_log.err
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas       664 Nov 23 22:19 CJOMDmiwNg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFNIKDmohyMem.diag
[2025-11-23 22:19:06] -rw-r--r-- 1 boincer umatlas     21742 Nov 23 22:19 stderr.txt
[2025-11-23 22:19:06] HITS file was successfully produced:
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas 905951289 Nov 23 22:17 shared/HITS.pool.root.1
[2025-11-23 22:19:06]  *** Contents of shared directory: ***
[2025-11-23 22:19:06] total 1297184
[2025-11-23 22:19:06] -rw-r--r-- 2 boincer umatlas 411141124 Nov 23 05:33 ATLAS.root_0
[2025-11-23 22:19:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:33 start_atlas.sh
[2025-11-23 22:19:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 05:33 input.tar.gz
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas 905951289 Nov 23 22:17 HITS.pool.root.1
[2025-11-23 22:19:06] -rw------- 1 boincer umatlas  10598400 Nov 23 22:19 result.tar.gz
22:19:07 (1186716): run_atlas exited; CPU time 474550.927656
22:19:07 (1186716): called boinc_finish(0)

</stderr_txt>
]]>

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