Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:22 (7107): wrapper (7.7.26015): starting
05:14:22 (7107): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 05:14:22] Arguments: --nthreads 12
[2025-11-23 05:14:22] Threads: 12
[2025-11-23 05:14:22] Checking for CVMFS
[2025-11-23 05:14:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 05:14:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 05:14:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 05:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 05:14:22] 2.11.2.0 25590 183909 87804 153204 1 9 12439691 20275201 1 130560 2 97149104 99.967 7318375 25449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 05:14:22] CVMFS is ok
[2025-11-23 05:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 05:14:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 05:14:22] Further information can be found at the LHC@home message board.
[2025-11-23 05:14:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 05:14:23] Checking for apptainer binary...
[2025-11-23 05:14:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 05:14:23] Running /usr/bin/apptainer --version
[2025-11-23 05:14:23] apptainer version 1.3.2-1.el7
[2025-11-23 05:14:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 05:14:24] c-205-24.aglt2.org
[2025-11-23 05:14:24] apptainer works
[2025-11-23 05:14:24] Set ATHENA_PROC_NUMBER=12
[2025-11-23 05:14:24] Set ATHENA_CORE_NUMBER=12
[2025-11-23 05:14:24] Starting ATLAS job with PandaID=6895332014
[2025-11-23 05:14:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 12:36:29]  *** The last 200 lines of the pilot log: ***
[2025-11-23 12:36:29] 2025-11-23 17:35:25,726 | INFO     | time since job start (26446s) is within the limit (172800.0s)
[2025-11-23 12:36:29] 2025-11-23 17:35:27,731 | INFO     | time since job start (26448s) is within the limit (172800.0s)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,221 | INFO     | monitor loop #1982: job 0:6895332014 is in state 'finished'
[2025-11-23 12:36:29] 2025-11-23 17:35:28,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,478 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 12:36:29] 2025-11-23 17:35:28,482 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-23 12:36:29] 2025-11-23 17:35:28,485 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895332014/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,485 | INFO     | extracted standard info from prmon json
[2025-11-23 12:36:29] 2025-11-23 17:35:28,486 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 12:36:29] 2025-11-23 17:35:28,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 12:36:29] 2025-11-23 17:35:28,494 | INFO     | fitting pss+swap vs Time
[2025-11-23 12:36:29] 2025-11-23 17:35:28,494 | INFO     | sum of square deviations: 25173421279.98624
[2025-11-23 12:36:29] 2025-11-23 17:35:28,498 | INFO     | sum of deviations: 370665419479.55884
[2025-11-23 12:36:29] 2025-11-23 17:35:28,498 | INFO     | mean x: 1763906085.2632794
[2025-11-23 12:36:29] 2025-11-23 17:35:28,498 | INFO     | mean y: 3436468.381062356
[2025-11-23 12:36:29] 2025-11-23 17:35:28,498 | INFO     | intersect: -25969155089.385033
[2025-11-23 12:36:29] 2025-11-23 17:35:28,499 | INFO     | chi2: 5.625714208579617
[2025-11-23 12:36:29] 2025-11-23 17:35:28,499 | INFO     | sum of square deviations: 24311430584.635433
[2025-11-23 12:36:29] 2025-11-23 17:35:28,503 | INFO     | sum of deviations: 518496977120.27155
[2025-11-23 12:36:29] 2025-11-23 17:35:28,503 | INFO     | mean x: 1763905932.766355
[2025-11-23 12:36:29] 2025-11-23 17:35:28,504 | INFO     | mean y: 3462594.2827102803
[2025-11-23 12:36:29] 2025-11-23 17:35:28,504 | INFO     | intersect: -37615874156.79572
[2025-11-23 12:36:29] 2025-11-23 17:35:28,504 | INFO     | chi2: 3.2316430848698596
[2025-11-23 12:36:29] 2025-11-23 17:35:28,504 | INFO     | current chi2=3.2316430848698596 (change=42.5558610862 %)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,505 | INFO     | sum of square deviations: 23469347239.27651
[2025-11-23 12:36:29] 2025-11-23 17:35:28,509 | INFO     | sum of deviations: 574839636478.8439
[2025-11-23 12:36:29] 2025-11-23 17:35:28,509 | INFO     | mean x: 1763905780.2695036
[2025-11-23 12:36:29] 2025-11-23 17:35:28,509 | INFO     | mean y: 3472769.0189125296
[2025-11-23 12:36:29] 2025-11-23 17:35:28,509 | INFO     | intersect: -43200240873.94777
[2025-11-23 12:36:29] 2025-11-23 17:35:28,509 | INFO     | chi2: 2.7258768855377147
[2025-11-23 12:36:29] 2025-11-23 17:35:28,510 | INFO     | current chi2=2.7258768855377147 (change=15.650434966041818 %)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,510 | INFO     | right removable region: 422
[2025-11-23 12:36:29] 2025-11-23 17:35:28,510 | INFO     | sum of square deviations: 24311361044.63546
[2025-11-23 12:36:29] 2025-11-23 17:35:28,514 | INFO     | sum of deviations: 218419864200.78503
[2025-11-23 12:36:29] 2025-11-23 17:35:28,514 | INFO     | mean x: 1763906237.766355
[2025-11-23 12:36:29] 2025-11-23 17:35:28,514 | INFO     | mean y: 3463330.887850467
[2025-11-23 12:36:29] 2025-11-23 17:35:28,514 | INFO     | intersect: -15843948922.522741
[2025-11-23 12:36:29] 2025-11-23 17:35:28,515 | INFO     | chi2: 3.063152275432594
[2025-11-23 12:36:29] 2025-11-23 17:35:28,515 | INFO     | current chi2=3.063152275432594 (change=45.550872976073556 %)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,515 | INFO     | sum of square deviations: 23469234022.81332
[2025-11-23 12:36:29] 2025-11-23 17:35:28,519 | INFO     | sum of deviations: 180350615034.8554
[2025-11-23 12:36:29] 2025-11-23 17:35:28,519 | INFO     | mean x: 1763906390.2671394
[2025-11-23 12:36:29] 2025-11-23 17:35:28,519 | INFO     | mean y: 3470218.0543735223
[2025-11-23 12:36:29] 2025-11-23 17:35:28,520 | INFO     | intersect: -13551365105.474274
[2025-11-23 12:36:29] 2025-11-23 17:35:28,520 | INFO     | chi2: 2.9763572240089577
[2025-11-23 12:36:29] 2025-11-23 17:35:28,520 | INFO     | current chi2=2.9763572240089577 (change=2.833520622522064 %)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,520 | INFO     | left removable region: 20
[2025-11-23 12:36:29] 2025-11-23 17:35:28,521 | INFO     | sum of square deviations: 20144509449.295933
[2025-11-23 12:36:29] 2025-11-23 17:35:28,524 | INFO     | sum of deviations: 337969993015.6741
[2025-11-23 12:36:29] 2025-11-23 17:35:28,524 | INFO     | mean x: 1763906359.778607
[2025-11-23 12:36:29] 2025-11-23 17:35:28,524 | INFO     | mean y: 3516492.310945274
[2025-11-23 12:36:29] 2025-11-23 17:35:28,525 | INFO     | intersect: -29590027177.50102
[2025-11-23 12:36:29] 2025-11-23 17:35:28,525 | INFO     | chi2: 0.024448876757942013
[2025-11-23 12:36:29] 2025-11-23 17:35:28,525 | INFO     | current memory leak: 16.78 B/s (using 402 data points, chi2=0.02)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | could have reported an average CPU frequency of 2381 MHz (18 samples)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | ..............................
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . Timing measurements:
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . get job = 0 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . initial setup = 2 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . payload setup = 7 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . stage-in = 0 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . payload execution = 26409 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . stage-out = 3 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,526 | INFO     | . log creation = 0 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,527 | INFO     | ..............................
[2025-11-23 12:36:29] 2025-11-23 17:35:28,989 | INFO     | 
[2025-11-23 12:36:29] 2025-11-23 17:35:28,989 | INFO     | job summary report
[2025-11-23 12:36:29] 2025-11-23 17:35:28,989 | INFO     | --------------------------------------------------
[2025-11-23 12:36:29] 2025-11-23 17:35:28,989 | INFO     | PanDA job id: 6895332014
[2025-11-23 12:36:29] 2025-11-23 17:35:28,989 | INFO     | task id: 47556137
[2025-11-23 12:36:29] 2025-11-23 17:35:28,989 | INFO     | errors: (none)
[2025-11-23 12:36:29] 2025-11-23 17:35:28,990 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 12:36:29] 2025-11-23 17:35:28,990 | INFO     | pilot state: finished 
[2025-11-23 12:36:29] 2025-11-23 17:35:28,990 | INFO     | transexitcode: 0
[2025-11-23 12:36:29] 2025-11-23 17:35:28,990 | INFO     | exeerrorcode: 0
[2025-11-23 12:36:29] 2025-11-23 17:35:28,990 | INFO     | exeerrordiag: 
[2025-11-23 12:36:29] 2025-11-23 17:35:28,990 | INFO     | exitcode: 0
[2025-11-23 12:36:29] 2025-11-23 17:35:28,991 | INFO     | exitmsg: OK
[2025-11-23 12:36:29] 2025-11-23 17:35:28,991 | INFO     | cpuconsumptiontime: 302568 s
[2025-11-23 12:36:29] 2025-11-23 17:35:28,991 | INFO     | nevents: 1000
[2025-11-23 12:36:29] 2025-11-23 17:35:28,991 | INFO     | neventsw: 0
[2025-11-23 12:36:29] 2025-11-23 17:35:28,991 | INFO     | pid: 18215
[2025-11-23 12:36:29] 2025-11-23 17:35:28,991 | INFO     | pgrp: 18215
[2025-11-23 12:36:29] 2025-11-23 17:35:28,992 | INFO     | corecount: 12
[2025-11-23 12:36:29] 2025-11-23 17:35:28,992 | INFO     | event service: False
[2025-11-23 12:36:29] 2025-11-23 17:35:28,992 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 26420: 2336586, 26424: 2345580, 26426: 2345636, 26433: 2346010}
[2025-11-23 12:36:29] 2025-11-23 17:35:28,992 | INFO     | --------------------------------------------------
[2025-11-23 12:36:29] 2025-11-23 17:35:28,992 | INFO     | 
[2025-11-23 12:36:29] 2025-11-23 17:35:28,992 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 12:36:29] 2025-11-23 17:35:29,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,021 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 12:36:29] 2025-11-23 17:35:29,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 12:36:29] 2025-11-23 17:35:29,022 | INFO     | job 6895332014 has completed (purged errors)
[2025-11-23 12:36:29] 2025-11-23 17:35:29,022 | INFO     | overall cleanup function is called
[2025-11-23 12:36:29] 2025-11-23 17:35:30,039 | INFO     | --- collectZombieJob: --- 10, [18215]
[2025-11-23 12:36:29] 2025-11-23 17:35:30,039 | INFO     | zombie collector waiting for pid 18215
[2025-11-23 12:36:29] 2025-11-23 17:35:30,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 12:36:29] 2025-11-23 17:35:30,039 | INFO     | collected zombie processes
[2025-11-23 12:36:29] 2025-11-23 17:35:30,039 | INFO     | will attempt to kill all subprocesses of pid=18215
[2025-11-23 12:36:29] 2025-11-23 17:35:30,129 | INFO     | process IDs to be killed: [18215] (in reverse order)
[2025-11-23 12:36:29] 2025-11-23 17:35:30,180 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 12:36:29] 2025-11-23 17:35:30,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 12:36:29] 2025-11-23 17:35:30,183 | INFO     | did not find any defunct processes belonging to 18215
[2025-11-23 12:36:29] 2025-11-23 17:35:30,186 | INFO     | did not find any defunct processes belonging to 18215
[2025-11-23 12:36:29] 2025-11-23 17:35:30,188 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 12:36:29] 2025-11-23 17:35:30,188 | INFO     | ready for new job
[2025-11-23 12:36:29] 2025-11-23 17:35:30,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 12:36:29] 2025-11-23 17:35:30,190 | INFO     | ***************************************
[2025-11-23 12:36:29] 2025-11-23 17:35:30,190 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 12:36:29] 2025-11-23 17:35:30,190 | INFO     | ***************************************
[2025-11-23 12:36:29] 2025-11-23 17:35:30,191 | INFO     | 
[2025-11-23 12:36:29] 2025-11-23 17:35:30,191 | INFO     | architecture information:
[2025-11-23 12:36:29] 2025-11-23 17:35:30,192 | INFO     | executing command: cat /etc/os-release
[2025-11-23 12:36:29] 2025-11-23 17:35:30,206 | INFO     | cat /etc/os-release:
[2025-11-23 12:36:29] NAME="CentOS Linux"
[2025-11-23 12:36:29] VERSION="7 (Core)"
[2025-11-23 12:36:29] ID="centos"
[2025-11-23 12:36:29] ID_LIKE="rhel fedora"
[2025-11-23 12:36:29] VERSION_ID="7"
[2025-11-23 12:36:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 12:36:29] ANSI_COLOR="0;31"
[2025-11-23 12:36:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 12:36:29] HOME_URL="https://www.centos.org/"
[2025-11-23 12:36:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 12:36:29] 
[2025-11-23 12:36:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 12:36:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 12:36:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 12:36:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 12:36:29] 
[2025-11-23 12:36:29] 2025-11-23 17:35:30,206 | INFO     | ***************************************
[2025-11-23 12:36:29] 2025-11-23 17:35:30,709 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 12:36:29] 2025-11-23 17:35:30,725 | INFO     | sufficient remaining disk space (28231860224 B)
[2025-11-23 12:36:29] 2025-11-23 17:35:30,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 12:36:29] 2025-11-23 17:35:30,730 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 12:36:29] 2025-11-23 17:35:30,730 | INFO     | update_server=False
[2025-11-23 12:36:29] 2025-11-23 17:35:30,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 12:36:29] 2025-11-23 17:35:30,731 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 12:36:29] 2025-11-23 17:35:30,765 | INFO     | all payload control threads have been joined
[2025-11-23 12:36:29] 2025-11-23 17:35:31,382 | INFO     | all data control threads have been joined
[2025-11-23 12:36:29] 2025-11-23 17:35:31,577 | INFO     | all job control threads have been joined
[2025-11-23 12:36:29] 2025-11-23 17:35:31,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:36:29] 2025-11-23 17:35:31,729 | INFO     | aborting loop
[2025-11-23 12:36:29] 2025-11-23 17:35:31,734 | INFO     | [job] retrieve thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:31,770 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:31,771 | INFO     | [payload] control thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:31,783 | INFO     | [data] copytool_in thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:31,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:31,943 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,043 | INFO     | [payload] failed_post thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 12:36:29] 2025-11-23 17:35:32,387 | INFO     | [data] control thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,457 | INFO     | [job] validate thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,481 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,582 | INFO     | [job] control thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,733 | INFO     | [job] job monitor thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,736 | INFO     | [data] copytool_out thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:32,850 | INFO     | [payload] validate_post thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:33,613 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 12:36:29] 2025-11-23 17:35:34,618 | INFO     | [job] queue monitor thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:35:36,073 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 12:36:29] 2025-11-23 17:36:00,933 | INFO     | PID=10801 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 12:36:29] 2025-11-23 17:36:00,934 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 12:36:29] 2025-11-23 17:36:00,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 12:36:29] 2025-11-23 17:36:00,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 12:36:29] 2025-11-23 17:36:22,702 | INFO     | [monitor] cgroup control has ended
[2025-11-23 12:36:29] 2025-11-23 17:36:23,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041753663296)>', '<ExcThread(monitor, started 140041057707776)>']
[2025-11-23 12:36:29] 2025-11-23 17:36:24,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 12:36:29] 2025-11-23 17:36:24,042 | INFO     | [monitor] control thread has ended
[2025-11-23 12:36:29] 2025-11-23 17:36:28,717 | INFO     | all workflow threads have been joined
[2025-11-23 12:36:29] 2025-11-23 17:36:28,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 12:36:29] 2025-11-23 17:36:28,717 | INFO     | traces error code: 0
[2025-11-23 12:36:29] 2025-11-23 17:36:28,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 12:36:29] 2025-11-23 17:36:28,802 [wrapper] ==== pilot stdout END ====
[2025-11-23 12:36:29] 2025-11-23 17:36:28,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 12:36:29] 2025-11-23 17:36:28,810 [wrapper] pilotpid: 10801
[2025-11-23 12:36:29] 2025-11-23 17:36:28,814 [wrapper] Pilot exit status: 0
[2025-11-23 12:36:29] 2025-11-23 17:36:28,828 [wrapper] pandaids: 6895332014
[2025-11-23 12:36:29] 2025-11-23 17:36:28,874 [wrapper] cleanup supervisor_pilot 10156 10802
[2025-11-23 12:36:29] 2025-11-23 17:36:28,878 [wrapper] Test setup, not cleaning
[2025-11-23 12:36:29] 2025-11-23 17:36:28,881 [wrapper] apfmon messages muted
[2025-11-23 12:36:29] 2025-11-23 17:36:28,885 [wrapper] ==== wrapper stdout END ====
[2025-11-23 12:36:29] 2025-11-23 17:36:28,889 [wrapper] ==== wrapper stderr END ====
[2025-11-23 12:36:29]  *** Error codes and diagnostics ***
[2025-11-23 12:36:29]     "exeErrorCode": 0,
[2025-11-23 12:36:29]     "exeErrorDiag": "",
[2025-11-23 12:36:29]     "pilotErrorCode": 0,
[2025-11-23 12:36:29]     "pilotErrorDiag": "",
[2025-11-23 12:36:29]  *** Listing of results directory ***
[2025-11-23 12:36:29] total 1324604
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 18:51 pilot3.tar.gz
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 19:14 queuedata.json
[2025-11-23 12:36:29] -rwx------ 1 boincer umatlas     36292 Nov 21 19:16 runpilot2-wrapper.sh
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas       100 Nov 23 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 12:36:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 05:14 run_atlas
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas       105 Nov 23 05:14 job.xml
[2025-11-23 12:36:29] -rw-r--r-- 2 boincer umatlas 411532723 Nov 23 05:14 EVNT.47483658._000187.pool.root.1
[2025-11-23 12:36:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:14 start_atlas.sh
[2025-11-23 12:36:29] drwxrwx--x 2 boincer umatlas      4096 Nov 23 05:14 shared
[2025-11-23 12:36:29] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 05:14 input.tar.gz
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas         0 Nov 23 05:14 boinc_lockfile
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 05:14 pandaJob.out
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas        57 Nov 23 05:14 setup.sh.local
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas    989784 Nov 23 05:14 agis_schedconf.cvmfs.json
[2025-11-23 12:36:29] drwx------ 5 boincer umatlas      4096 Nov 23 05:14 pilot3
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas       532 Nov 23 12:24 boinc_task_state.xml
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 12:28 init_data.xml
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas 929177616 Nov 23 12:34 HITS.47556137._001868.pool.root.1
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas      1061 Nov 23 12:35 memory_monitor_summary.json
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas   1526164 Nov 23 12:35 agis_ddmendpoints.agis.ALL.json
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas   2178729 Nov 23 12:35 log.47556137._001868.job.log.tgz.1
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas      8663 Nov 23 12:35 heartbeat.json
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas        95 Nov 23 12:36 pilot_heartbeat.json
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 12:36 boinc_mmap_file
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas        29 Nov 23 12:36 wrapper_checkpoint.txt
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas      4746 Nov 23 12:36 pilotlog.txt
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas   3704297 Nov 23 12:36 log.47556137._001868.job.log.1
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas       353 Nov 23 12:36 output.list
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas       620 Nov 23 12:36 runtime_log
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas   5898240 Nov 23 12:36 result.tar.gz
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 12:36 runtime_log.err
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas       670 Nov 23 12:36 9ZINDmUTqg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAsHKDmZtb74m.diag
[2025-11-23 12:36:29] -rw-r--r-- 1 boincer umatlas     21318 Nov 23 12:36 stderr.txt
[2025-11-23 12:36:29] HITS file was successfully produced:
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas 929177616 Nov 23 12:34 shared/HITS.pool.root.1
[2025-11-23 12:36:29]  *** Contents of shared directory: ***
[2025-11-23 12:36:29] total 1315652
[2025-11-23 12:36:29] -rw-r--r-- 2 boincer umatlas 411532723 Nov 23 05:14 ATLAS.root_0
[2025-11-23 12:36:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:14 start_atlas.sh
[2025-11-23 12:36:29] -rw-r--r-- 2 boincer umatlas    590104 Nov 23 05:14 input.tar.gz
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas 929177616 Nov 23 12:34 HITS.pool.root.1
[2025-11-23 12:36:29] -rw------- 1 boincer umatlas   5898240 Nov 23 12:36 result.tar.gz
12:36:30 (7107): run_atlas exited; CPU time 295891.440105
12:36:30 (7107): called boinc_finish(0)

</stderr_txt>
]]>

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