Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 11:29:35 (546563): vboxwrapper version 26210
2025-11-25 11:29:35 (546563): BOINC client version: 7.16.6
2025-11-25 11:29:35 (546563): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-25 11:29:35 (546563): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 11:29:35 (546563): Create VM. (boinc_9d7e7cad5ff31ebf, slot#0)
2025-11-25 11:29:35 (546563): Setting Memory Size for VM. (4800MB)
2025-11-25 11:29:36 (546563): Setting CPU Count for VM. (8)
2025-11-25 11:29:36 (546563): Setting Chipset Options for VM.
2025-11-25 11:29:36 (546563): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 11:29:36 (546563): Setting Boot Options for VM.
2025-11-25 11:29:36 (546563): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 11:29:36 (546563): Enabling VM Network Access.
2025-11-25 11:29:37 (546563): Disabling USB Support for VM.
2025-11-25 11:29:37 (546563): Disabling COM Port Support for VM.
2025-11-25 11:29:37 (546563): Disabling LPT Port Support for VM.
2025-11-25 11:29:37 (546563): Disabling Audio Support for VM.
2025-11-25 11:29:37 (546563): Disabling Clipboard Support for VM.
2025-11-25 11:29:37 (546563): Disabling Drag and Drop Support for VM.
2025-11-25 11:29:38 (546563): Adding storage controller(s) to VM.
2025-11-25 11:29:38 (546563): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 11:29:38 (546563): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 11:29:38 (546563): forwarding host port 54571 to guest port 80
2025-11-25 11:29:39 (546563): Enabling remote desktop for VM.
2025-11-25 11:29:39 (546563): Enabling shared directory for VM.
2025-11-25 11:29:39 (546563): Starting VM using VBoxManage interface. (boinc_9d7e7cad5ff31ebf, slot#0)
2025-11-25 11:29:40 (546563): Successfully started VM. (PID = '547003')
2025-11-25 11:29:40 (546563): Reporting VM Process ID to BOINC.
2025-11-25 11:29:40 (546563): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-25 11:29:40 (546563): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 11:29:40 (546563): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 11:29:40 (546563): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 11:29:40 (546563): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 11:29:40 (546563): Detected: Web Application Enabled (http://localhost:54571)
2025-11-25 11:29:40 (546563): Detected: Remote Desktop Enabled (localhost:41577)
2025-11-25 11:29:40 (546563): Preference change detected
2025-11-25 11:29:40 (546563): Setting CPU throttle for VM. (90%)
2025-11-25 11:29:41 (546563): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 11:29:42 (546563): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 11:29:42 (546563): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 11:29:45 (546563): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 11:29:45 (546563): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 11:29:45 (546563): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 11:29:54 (546563): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 11:29:54 (546563): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-25 11:30:19 (546563): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.000459 main     Log opened 2025-11-25T18:30:17.174288000Z
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.000678 main     OS Product: Linux
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.000757 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.000825 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.000892 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.000894 main     Process ID: 1379
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.000895 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 11:30:19 (546563): Guest Log: 00:00:00.003717 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 11:30:20 (546563): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 11:30:20 (546563): Guest Log: [INFO] Mounting shared directory
2025-11-25 11:30:21 (546563): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 11:30:30 (546563): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 11:30:30 (546563): Guest Log: [INFO] Detected branch: prod
2025-11-25 11:30:30 (546563): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 11:30:30 (546563): Guest Log: Copying input files
2025-11-25 11:30:32 (546563): Guest Log: Copied input files into RunAtlas.
2025-11-25 11:30:32 (546563): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 11:30:32 (546563): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 11:30:32 (546563): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 11:30:32 (546563): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 11:30:42 (546563): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 11:30:42 (546563): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 11:30:42 (546563): Guest Log: 2.6.3.0 1658 0 32188 153293 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 11:30:46 (546563): Guest Log: copied the webapp to /var/www
2025-11-25 11:30:46 (546563): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-25 11:30:46 (546563): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-25 11:30:47 (546563): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 11:30:47 (546563): Guest Log:  *** Starting ATLAS job. (PandaID=6895331384 taskID=47556137) ***
2025-11-25 13:08:45 (546563): Status Report: Elapsed Time: '6000.000000'
2025-11-25 13:08:45 (546563): Status Report: CPU Time: '36773.680000'
2025-11-25 14:47:51 (546563): Status Report: Elapsed Time: '12000.000000'
2025-11-25 14:47:51 (546563): Status Report: CPU Time: '79229.120000'
2025-11-25 16:26:58 (546563): Status Report: Elapsed Time: '18000.000000'
2025-11-25 16:26:58 (546563): Status Report: CPU Time: '121686.150000'
2025-11-25 18:06:04 (546563): Status Report: Elapsed Time: '24000.000000'
2025-11-25 18:06:04 (546563): Status Report: CPU Time: '164148.290000'
2025-11-25 19:45:10 (546563): Status Report: Elapsed Time: '30000.000000'
2025-11-25 19:45:10 (546563): Status Report: CPU Time: '206605.130000'
2025-11-25 21:24:16 (546563): Status Report: Elapsed Time: '36000.000000'
2025-11-25 21:24:16 (546563): Status Report: CPU Time: '249066.410000'
2025-11-25 23:03:22 (546563): Status Report: Elapsed Time: '42000.000000'
2025-11-25 23:03:22 (546563): Status Report: CPU Time: '291530.240000'
2025-11-26 00:42:28 (546563): Status Report: Elapsed Time: '48000.000000'
2025-11-26 00:42:28 (546563): Status Report: CPU Time: '333984.580000'
2025-11-26 02:21:35 (546563): Status Report: Elapsed Time: '54000.000000'
2025-11-26 02:21:35 (546563): Status Report: CPU Time: '376455.510000'
2025-11-26 04:00:41 (546563): Status Report: Elapsed Time: '60000.000000'
2025-11-26 04:00:41 (546563): Status Report: CPU Time: '418918.360000'
2025-11-26 05:39:47 (546563): Status Report: Elapsed Time: '66000.000000'
2025-11-26 05:39:47 (546563): Status Report: CPU Time: '461352.660000'
2025-11-26 07:18:53 (546563): Status Report: Elapsed Time: '72000.000000'
2025-11-26 07:18:53 (546563): Status Report: CPU Time: '503808.240000'
2025-11-26 08:57:59 (546563): Status Report: Elapsed Time: '78000.000000'
2025-11-26 08:57:59 (546563): Status Report: CPU Time: '546265.470000'
2025-11-26 10:37:05 (546563): Status Report: Elapsed Time: '84000.000000'
2025-11-26 10:37:05 (546563): Status Report: CPU Time: '588735.120000'
2025-11-26 11:08:26 (546563): Guest Log:  *** Job finished ***
2025-11-26 11:08:26 (546563): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:09,629 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:09,630 | INFO     | traces error code: 0
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:09,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,134 | INFO     | PID=6102 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,135 | INFO     | found 0 job(s) in 20 queues
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,135 | CRITICAL | thread 'MainThread' is not alive
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,136 | INFO     | [monitor] control thread has ended
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,452 [wrapper] ==== pilot stdout END ====
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,465 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,478 [wrapper] pilotpid: 6102
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,491 [wrapper] Pilot exit status: 0
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,556 [wrapper] pandaids: 6895331384
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,632 [wrapper] cleanup supervisor_pilot 22614 6103
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,643 [wrapper] Test setup, not cleaning
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,656 [wrapper] apfmon messages muted
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,669 [wrapper] ==== wrapper stdout END ====
2025-11-26 11:08:26 (546563): Guest Log: 2025-11-26 18:08:22,681 [wrapper] ==== wrapper stderr END ====
2025-11-26 11:08:26 (546563): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 11:08:26 (546563): Guest Log:     "exeErrorCode": 0,
2025-11-26 11:08:26 (546563): Guest Log:     "exeErrorDiag": "",
2025-11-26 11:08:26 (546563): Guest Log:     "pilotErrorCode": 0,
2025-11-26 11:08:26 (546563): Guest Log:     "pilotErrorDiag": "",
2025-11-26 11:08:26 (546563): Guest Log:  *** Listing of results directory ***
2025-11-26 11:08:26 (546563): Guest Log: total 932244
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 23:30 pilot3.tar.gz
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 23:34 queuedata.json
2025-11-26 11:08:26 (546563): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 23:34 runpilot2-wrapper.sh
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas      6204 Nov 25 18:30 init_data.xml
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas    590095 Nov 25 18:30 input.tar.gz
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 25 18:30 start_atlas.sh
2025-11-26 11:08:26 (546563): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 18:30 EVNT.47483658._000173.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas      2783 Nov 25 18:30 pandaJob.out
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas    991543 Nov 25 18:33 agis_schedconf.cvmfs.json
2025-11-26 11:08:26 (546563): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 18:33 pilot3
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas 924655929 Nov 26 18:06 HITS.47556137._001721.pool.root.1
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas      1045 Nov 26 18:07 memory_monitor_summary.json
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 18:07 agis_ddmendpoints.agis.ALL.json
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas   2447270 Nov 26 18:07 log.47556137._001721.job.log.tgz.1
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 18:07 pilot_heartbeat.json
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas      8655 Nov 26 18:07 heartbeat.json
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas       814 Nov 26 18:08 pilotlog.txt
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas  10610075 Nov 26 18:08 log.47556137._001721.job.log.1
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 18:08 output.list
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 18:08 runtime_log
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas  13076480 Nov 26 18:08 result.tar.gz
2025-11-26 11:08:26 (546563): Guest Log: -rw-r--r--. 1 atlas atlas      8765 Nov 26 18:08 runtime_log.err
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas       670 Nov 26 18:08 GQQMDmLppg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmmJKDmi2gW7n.diag
2025-11-26 11:08:26 (546563): Guest Log: Looking for outputfile HITS.47556137._001721.pool.root.1
2025-11-26 11:08:26 (546563): Guest Log: HITS file was successfully produced
2025-11-26 11:08:26 (546563): Guest Log: -rw-------. 1 atlas atlas 924655929 Nov 26 18:06 /home/atlas/RunAtlas/HITS.47556137._001721.pool.root.1
2025-11-26 11:08:26 (546563): Guest Log: Successfully finished the ATLAS job!
2025-11-26 11:08:26 (546563): Guest Log: Copying the results back to the shared directory!
2025-11-26 11:08:27 (546563): Guest Log:  *** Contents of shared directory: ***
2025-11-26 11:08:27 (546563): Guest Log: total 413052
2025-11-26 11:08:27 (546563): Guest Log: -rw-r--r--. 1 root root 409262214 Nov 25 18:29 ATLAS.root_0
2025-11-26 11:08:27 (546563): Guest Log: -rw-r--r--. 1 root root      6204 Nov 25 18:29 init_data.xml
2025-11-26 11:08:27 (546563): Guest Log: -rw-r--r--. 1 root root    590095 Nov 25 18:29 input.tar.gz
2025-11-26 11:08:27 (546563): Guest Log: -rw-r--r--. 1 root root  13076480 Nov 26 18:08 result.tar.gz
2025-11-26 11:08:27 (546563): Guest Log: -rw-r--r--. 1 root root     15847 Nov 25 18:29 start_atlas.sh
2025-11-26 11:08:27 (546563): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 11:08:27 (546563): VM Completion File Detected.
2025-11-26 11:08:27 (546563): Powering off VM.
2025-11-26 11:08:28 (546563): Successfully stopped VM.
2025-11-26 11:08:28 (546563): Deregistering VM. (boinc_9d7e7cad5ff31ebf, slot#0)
2025-11-26 11:08:28 (546563): Removing network bandwidth throttle group from VM.
2025-11-26 11:08:28 (546563): Removing VM from VirtualBox.
2025-11-26 11:08:33 (546563): called boinc_finish(0)

</stderr_txt>
]]>

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