Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
13:42:27 (1117290): wrapper (7.7.26015): starting
13:42:27 (1117290): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 13:42:27] Arguments: --nthreads 8
[2025-11-23 13:42:27] Threads: 8
[2025-11-23 13:42:27] Checking for CVMFS
[2025-11-23 13:42:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 13:42:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 13:42:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 13:42:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 13:42:31] 2.11.5.0 6031 2871 160924 153209 3 81 2745259 4194305 20099 130560 0 22435842 99.976 403333 444 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-23 13:42:31] CVMFS is ok
[2025-11-23 13:42:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 13:42:31] Checking for apptainer binary...
[2025-11-23 13:42:31] apptainer is not installed, using version from CVMFS
[2025-11-23 13:42:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 13:42:34] mikemint-desktop
[2025-11-23 13:42:34] apptainer works
[2025-11-23 13:42:34] Set ATHENA_PROC_NUMBER=8
[2025-11-23 13:42:34] Set ATHENA_CORE_NUMBER=8
[2025-11-23 13:42:34] Starting ATLAS job with PandaID=6894290849
[2025-11-23 13:42:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:42:24]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:42:24] 2025-11-24 03:41:25,023 | INFO     | time since job start (53801s) is within the limit (172800.0s)
[2025-11-24 04:42:24] 2025-11-24 03:41:25,671 | INFO     | monitor loop #3309: job 0:6894290849 is in state 'finished'
[2025-11-24 04:42:24] 2025-11-24 03:41:25,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:42:24] 2025-11-24 03:41:27,031 | INFO     | time since job start (53803s) is within the limit (172800.0s)
[2025-11-24 04:42:24] 2025-11-24 03:41:28,183 | INFO     | monitor loop #3310: job 0:6894290849 is in state 'finished'
[2025-11-24 04:42:24] 2025-11-24 03:41:28,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:42:24] 2025-11-24 03:41:29,039 | INFO     | time since job start (53805s) is within the limit (172800.0s)
[2025-11-24 04:42:24] 2025-11-24 03:41:30,695 | INFO     | monitor loop #3311: job 0:6894290849 is in state 'finished'
[2025-11-24 04:42:24] 2025-11-24 03:41:30,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:42:24] 2025-11-24 03:41:31,051 | INFO     | time since job start (53807s) is within the limit (172800.0s)
[2025-11-24 04:42:24] 2025-11-24 03:41:33,063 | INFO     | time since job start (53809s) is within the limit (172800.0s)
[2025-11-24 04:42:24] 2025-11-24 03:41:33,211 | INFO     | monitor loop #3312: job 0:6894290849 is in state 'finished'
[2025-11-24 04:42:24] 2025-11-24 03:41:33,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:42:24] 2025-11-24 03:41:35,079 | INFO     | time since job start (53811s) is within the limit (172800.0s)
[2025-11-24 04:42:24] 2025-11-24 03:41:35,723 | INFO     | monitor loop #3313: job 0:6894290849 is in state 'finished'
[2025-11-24 04:42:24] 2025-11-24 03:41:35,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:42:24] 2025-11-24 03:41:36,399 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 04:42:24] 2025-11-24 03:41:36,429 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2359.8846718750005
[2025-11-24 04:42:24] 2025-11-24 03:41:36,461 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6894290849/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:42:24] 2025-11-24 03:41:36,462 | INFO     | extracted standard info from prmon json
[2025-11-24 04:42:24] 2025-11-24 03:41:36,462 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:42:24] 2025-11-24 03:41:36,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:42:24] 2025-11-24 03:41:36,478 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:42:24] 2025-11-24 03:41:36,479 | INFO     | sum of square deviations: 208442569406.05487
[2025-11-24 04:42:24] 2025-11-24 03:41:36,500 | INFO     | sum of deviations: -62733705846.44065
[2025-11-24 04:42:24] 2025-11-24 03:41:36,501 | INFO     | mean x: 1763928912.589041
[2025-11-24 04:42:24] 2025-11-24 03:41:36,501 | INFO     | mean y: 2766739.621004566
[2025-11-24 04:42:24] 2025-11-24 03:41:36,501 | INFO     | intersect: 533645810.3007887
[2025-11-24 04:42:24] 2025-11-24 03:41:36,502 | INFO     | chi2: 30.101635025020546
[2025-11-24 04:42:24] 2025-11-24 03:41:36,503 | INFO     | sum of square deviations: 204893938015.0906
[2025-11-24 04:42:24] 2025-11-24 03:41:36,523 | INFO     | sum of deviations: 221659646242.33447
[2025-11-24 04:42:24] 2025-11-24 03:41:36,524 | INFO     | mean x: 1763928760.0952928
[2025-11-24 04:42:24] 2025-11-24 03:41:36,524 | INFO     | mean y: 2778957.983926521
[2025-11-24 04:42:24] 2025-11-24 03:41:36,524 | INFO     | intersect: -1905485526.300647
[2025-11-24 04:42:24] 2025-11-24 03:41:36,525 | INFO     | chi2: 26.483733487374117
[2025-11-24 04:42:24] 2025-11-24 03:41:36,525 | INFO     | current chi2=26.483733487374117 (change=12.018953570592497 %)
[2025-11-24 04:42:24] 2025-11-24 03:41:36,525 | INFO     | right removable region: 870
[2025-11-24 04:42:24] 2025-11-24 03:41:36,526 | INFO     | sum of square deviations: 204893356075.0907
[2025-11-24 04:42:24] 2025-11-24 03:41:36,547 | INFO     | sum of deviations: -400768556966.2893
[2025-11-24 04:42:24] 2025-11-24 03:41:36,548 | INFO     | mean x: 1763929065.0952928
[2025-11-24 04:42:24] 2025-11-24 03:41:36,548 | INFO     | mean y: 2781260.0757749714
[2025-11-24 04:42:24] 2025-11-24 03:41:36,548 | INFO     | intersect: 3453001997.1018057
[2025-11-24 04:42:24] 2025-11-24 03:41:36,549 | INFO     | chi2: 26.101543594193824
[2025-11-24 04:42:24] 2025-11-24 03:41:36,549 | INFO     | current chi2=26.101543594193824 (change=13.28861846707608 %)
[2025-11-24 04:42:24] 2025-11-24 03:41:36,549 | INFO     | left removable region: 10
[2025-11-24 04:42:24] 2025-11-24 03:41:36,550 | INFO     | sum of square deviations: 197228113752.94287
[2025-11-24 04:42:24] 2025-11-24 03:41:36,571 | INFO     | sum of deviations: -265467254062.26758
[2025-11-24 04:42:24] 2025-11-24 03:41:36,571 | INFO     | mean x: 1763929034.6081395
[2025-11-24 04:42:24] 2025-11-24 03:41:36,571 | INFO     | mean y: 2805702.3523255815
[2025-11-24 04:42:24] 2025-11-24 03:41:36,571 | INFO     | intersect: 2377038200.2846456
[2025-11-24 04:42:24] 2025-11-24 03:41:36,572 | INFO     | chi2: 19.871710062746907
[2025-11-24 04:42:24] 2025-11-24 03:41:36,573 | INFO     | current memory leak: -1.35 B/s (using 860 data points, chi2=19.87)
[2025-11-24 04:42:24] 2025-11-24 03:41:36,573 | INFO     | could have reported an average CPU frequency of 2356 MHz (32 samples)
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | ..............................
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . Timing measurements:
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . get job = 0 s
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . initial setup = 6 s
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . payload setup = 118 s
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . stage-in = 0 s
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . payload execution = 53448 s
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . stage-out = 5 s
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | . log creation = 1 s
[2025-11-24 04:42:24] 2025-11-24 03:41:36,574 | INFO     | ..............................
[2025-11-24 04:42:24] 2025-11-24 03:41:37,087 | INFO     | time since job start (53813s) is within the limit (172800.0s)
[2025-11-24 04:42:24] 2025-11-24 03:41:37,179 | INFO     | 
[2025-11-24 04:42:24] 2025-11-24 03:41:37,179 | INFO     | job summary report
[2025-11-24 04:42:24] 2025-11-24 03:41:37,179 | INFO     | --------------------------------------------------
[2025-11-24 04:42:24] 2025-11-24 03:41:37,179 | INFO     | PanDA job id: 6894290849
[2025-11-24 04:42:24] 2025-11-24 03:41:37,179 | INFO     | task id: 47533967
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | errors: (none)
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | pilot state: finished 
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | transexitcode: 0
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | exeerrorcode: 0
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | exeerrordiag: 
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | exitcode: 0
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | exitmsg: OK
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | cpuconsumptiontime: 267175 s
[2025-11-24 04:42:24] 2025-11-24 03:41:37,180 | INFO     | nevents: 1000
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | neventsw: 0
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | pid: 1136420
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | pgrp: 1136420
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | corecount: 8
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | event service: False
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | sizes: {0: 2297927, 1: 2298620, 2: 2298819, 3: 2298819, 13: 2298847, 24: 2298903, 35: 2299059, 46: 2299087, 57: 2299115, 67: 2299143, 77: 2299433, 78: 2299769, 535
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | --------------------------------------------------
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | 
[2025-11-24 04:42:24] 2025-11-24 03:41:37,181 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2025-11-24 04:42:24] 2025-11-24 03:41:37,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:42:24] 2025-11-24 03:41:37,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:42:24] 2025-11-24 03:41:37,726 | INFO     | job 6894290849 has completed (purged errors)
[2025-11-24 04:42:24] 2025-11-24 03:41:37,726 | INFO     | overall cleanup function is called
[2025-11-24 04:42:24] 2025-11-24 03:41:38,767 | INFO     | --- collectZombieJob: --- 10, [1136420]
[2025-11-24 04:42:24] 2025-11-24 03:41:38,767 | INFO     | zombie collector waiting for pid 1136420
[2025-11-24 04:42:24] 2025-11-24 03:41:38,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:42:24] 2025-11-24 03:41:38,767 | INFO     | collected zombie processes
[2025-11-24 04:42:24] 2025-11-24 03:41:38,767 | INFO     | will attempt to kill all subprocesses of pid=1136420
[2025-11-24 04:42:24] 2025-11-24 03:41:40,591 | INFO     | process IDs to be killed: [1136420] (in reverse order)
[2025-11-24 04:42:24] 2025-11-24 03:41:46,146 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:42:24] 2025-11-24 03:41:46,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:42:24] 2025-11-24 03:41:46,196 | INFO     | did not find any defunct processes belonging to 1136420
[2025-11-24 04:42:24] 2025-11-24 03:41:46,230 | INFO     | did not find any defunct processes belonging to 1136420
[2025-11-24 04:42:24] 2025-11-24 03:41:46,271 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:42:24] 2025-11-24 03:41:46,271 | INFO     | ready for new job
[2025-11-24 04:42:24] 2025-11-24 03:41:46,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:42:24] 2025-11-24 03:41:46,277 | INFO     | ***************************************
[2025-11-24 04:42:24] 2025-11-24 03:41:46,278 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:42:24] 2025-11-24 03:41:46,278 | INFO     | ***************************************
[2025-11-24 04:42:24] 2025-11-24 03:41:46,278 | INFO     | 
[2025-11-24 04:42:24] 2025-11-24 03:41:46,307 | INFO     | architecture information:
[2025-11-24 04:42:24] 2025-11-24 03:41:46,331 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:42:24] 2025-11-24 03:41:46,572 | INFO     | cat /etc/os-release:
[2025-11-24 04:42:24] NAME="CentOS Linux"
[2025-11-24 04:42:24] VERSION="7 (Core)"
[2025-11-24 04:42:24] ID="centos"
[2025-11-24 04:42:24] ID_LIKE="rhel fedora"
[2025-11-24 04:42:24] VERSION_ID="7"
[2025-11-24 04:42:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:42:24] ANSI_COLOR="0;31"
[2025-11-24 04:42:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:42:24] HOME_URL="https://www.centos.org/"
[2025-11-24 04:42:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:42:24] 
[2025-11-24 04:42:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:42:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:42:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:42:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:42:24] 
[2025-11-24 04:42:24] 2025-11-24 03:41:46,572 | INFO     | ***************************************
[2025-11-24 04:42:24] 2025-11-24 03:41:47,075 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2025-11-24 04:42:24] 2025-11-24 03:41:47,321 | INFO     | sufficient remaining disk space (79789293568 B)
[2025-11-24 04:42:24] 2025-11-24 03:41:47,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:42:24] 2025-11-24 03:41:47,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:42:24] 2025-11-24 03:41:47,322 | INFO     | update_server=False
[2025-11-24 04:42:24] 2025-11-24 03:41:47,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:42:24] 2025-11-24 03:41:47,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:42:24] 2025-11-24 03:41:47,322 | INFO     | aborting loop
[2025-11-24 04:42:24] 2025-11-24 03:41:47,323 | INFO     | all job control threads have been joined
[2025-11-24 04:42:24] 2025-11-24 03:41:47,363 | INFO     | all payload control threads have been joined
[2025-11-24 04:42:24] 2025-11-24 03:41:47,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:42:24] 2025-11-24 03:41:48,327 | INFO     | [job] control thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:48,328 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:48,331 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:48,367 | INFO     | [payload] control thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:48,387 | INFO     | all data control threads have been joined
[2025-11-24 04:42:24] 2025-11-24 03:41:48,503 | INFO     | [job] validate thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:48,503 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:48,551 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,111 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:42:24] 2025-11-24 03:41:49,395 | INFO     | [data] control thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,711 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,715 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,763 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,811 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:49,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:42:24] 2025-11-24 03:41:50,843 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:41:53,327 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:42:24] 2025-11-24 03:42:11,530 | INFO     | PID=1124717 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 04:42:24] 2025-11-24 03:42:11,530 | INFO     | .. there are 25 such processes running
[2025-11-24 04:42:24] 2025-11-24 03:42:11,530 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:42:24] 2025-11-24 03:42:11,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:42:24] 2025-11-24 03:42:11,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:42:24] 2025-11-24 03:42:15,347 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:42:24] 2025-11-24 03:42:15,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127868901184)>', '<ExcThread(monitor, started 140127552640768)>']
[2025-11-24 04:42:24] 2025-11-24 03:42:16,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:42:24] 2025-11-24 03:42:16,559 | INFO     | [monitor] control thread has ended
[2025-11-24 04:42:24] 2025-11-24 03:42:20,643 | INFO     | all workflow threads have been joined
[2025-11-24 04:42:24] 2025-11-24 03:42:20,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:42:24] 2025-11-24 03:42:20,643 | INFO     | traces error code: 0
[2025-11-24 04:42:24] 2025-11-24 03:42:20,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:42:24] 2025-11-24 03:42:20,894 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:42:24] 2025-11-24 03:42:20,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:42:24] 2025-11-24 03:42:21,039 [wrapper] pilotpid: 1124717
[2025-11-24 04:42:24] 2025-11-24 03:42:21,119 [wrapper] Pilot exit status: 0
[2025-11-24 04:42:24] 2025-11-24 03:42:21,427 [wrapper] pandaids: 6894290849
[2025-11-24 04:42:24] 2025-11-24 03:42:22,211 [wrapper] cleanup supervisor_pilot 3522072 1124718
[2025-11-24 04:42:24] 2025-11-24 03:42:22,263 [wrapper] Test setup, not cleaning
[2025-11-24 04:42:24] 2025-11-24 03:42:22,315 [wrapper] apfmon messages muted
[2025-11-24 04:42:24] 2025-11-24 03:42:22,391 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:42:24] 2025-11-24 03:42:22,475 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:42:24]  *** Error codes and diagnostics ***
[2025-11-24 04:42:24]     "exeErrorCode": 0,
[2025-11-24 04:42:24]     "exeErrorDiag": "",
[2025-11-24 04:42:24]     "pilotErrorCode": 0,
[2025-11-24 04:42:24]     "pilotErrorDiag": "",
[2025-11-24 04:42:24]  *** Listing of results directory ***
[2025-11-24 04:42:24] insgesamt 1297884
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc    576529 Nov 21 12:49 pilot3.tar.gz
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc      5112 Nov 21 12:57 queuedata.json
[2025-11-24 04:42:24] -rwx------ 1 boinc boinc     36292 Nov 21 12:58 runpilot2-wrapper.sh
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc       100 Nov 23 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:42:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 13:42 run_atlas
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc       105 Nov 23 13:42 job.xml
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc      6666 Nov 23 13:42 init_data.xml
[2025-11-24 04:42:24] -rw-r--r-- 2 boinc boinc 409673475 Nov 23 13:42 EVNT.47493127._002434.pool.root.1
[2025-11-24 04:42:24] -rw-r--r-- 2 boinc boinc     15847 Nov 23 13:42 start_atlas.sh
[2025-11-24 04:42:24] drwxrwx--x 2 boinc boinc      4096 Nov 23 13:42 shared
[2025-11-24 04:42:24] -rw-r--r-- 2 boinc boinc    590106 Nov 23 13:42 input.tar.gz
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc         0 Nov 23 13:42 boinc_lockfile
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc      2784 Nov 23 13:42 pandaJob.out
[2025-11-24 04:42:24] -rw------- 1 boinc boinc        46 Nov 23 13:42 setup.sh.local
[2025-11-24 04:42:24] -rw------- 1 boinc boinc    989784 Nov 23 13:44 agis_schedconf.cvmfs.json
[2025-11-24 04:42:24] drwx------ 5 boinc boinc      4096 Nov 23 13:44 pilot3
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc       533 Nov 24 04:03 boinc_task_state.xml
[2025-11-24 04:42:24] -rw------- 1 boinc boinc 897426657 Nov 24 04:39 HITS.47533967._004056.pool.root.1
[2025-11-24 04:42:24] -rw------- 1 boinc boinc      1041 Nov 24 04:40 memory_monitor_summary.json
[2025-11-24 04:42:24] -rw------- 1 boinc boinc   1526164 Nov 24 04:40 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:42:24] -rw------- 1 boinc boinc   2042871 Nov 24 04:40 log.47533967._004056.job.log.tgz.1
[2025-11-24 04:42:24] -rw------- 1 boinc boinc        95 Nov 24 04:41 pilot_heartbeat.json
[2025-11-24 04:42:24] -rw------- 1 boinc boinc      8576 Nov 24 04:41 heartbeat.json
[2025-11-24 04:42:24] -rw------- 1 boinc boinc      4832 Nov 24 04:42 pilotlog.txt
[2025-11-24 04:42:24] -rw------- 1 boinc boinc   6956709 Nov 24 04:42 log.47533967._004056.job.log.1
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc      8192 Nov 24 04:42 boinc_mmap_file
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc        29 Nov 24 04:42 wrapper_checkpoint.txt
[2025-11-24 04:42:24] -rw------- 1 boinc boinc       353 Nov 24 04:42 output.list
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc       620 Nov 24 04:42 runtime_log
[2025-11-24 04:42:24] -rw------- 1 boinc boinc   9021440 Nov 24 04:42 result.tar.gz
[2025-11-24 04:42:24] -rw------- 1 boinc boinc       673 Nov 24 04:42 xhpNDmoxeg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZOJKDmDKBLnn.diag
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc      9473 Nov 24 04:42 runtime_log.err
[2025-11-24 04:42:24] -rw-r--r-- 1 boinc boinc     21551 Nov 24 04:42 stderr.txt
[2025-11-24 04:42:24] HITS file was successfully produced:
[2025-11-24 04:42:24] -rw------- 1 boinc boinc 897426657 Nov 24 04:39 shared/HITS.pool.root.1
[2025-11-24 04:42:24]  *** Contents of shared directory: ***
[2025-11-24 04:42:24] insgesamt 1285884
[2025-11-24 04:42:24] -rw-r--r-- 2 boinc boinc 409673475 Nov 23 13:42 ATLAS.root_0
[2025-11-24 04:42:24] -rw-r--r-- 2 boinc boinc     15847 Nov 23 13:42 start_atlas.sh
[2025-11-24 04:42:24] -rw-r--r-- 2 boinc boinc    590106 Nov 23 13:42 input.tar.gz
[2025-11-24 04:42:24] -rw------- 1 boinc boinc 897426657 Nov 24 04:39 HITS.pool.root.1
[2025-11-24 04:42:24] -rw------- 1 boinc boinc   9021440 Nov 24 04:42 result.tar.gz
04:42:26 (1117290): run_atlas exited; CPU time 269806.691615
04:42:26 (1117290): called boinc_finish(0)

</stderr_txt>
]]>

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