Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:06:21 (40026): wrapper (7.7.26015): starting
05:06:21 (40026): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 05:06:21] Arguments: --nthreads 8
[2025-11-23 05:06:21] Threads: 8
[2025-11-23 05:06:21] Checking for CVMFS
[2025-11-23 05:06:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 05:06:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 05:06:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 05:06:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 05:06:22] 2.11.2.0 5808 165910 106440 153203 0 90 18260117 18432000 2667 130560 0 108318434 99.947 8390482 6564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-23 05:06:22] CVMFS is ok
[2025-11-23 05:06:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 05:06:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 05:06:22] Further information can be found at the LHC@home message board.
[2025-11-23 05:06:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 05:06:22] Checking for apptainer binary...
[2025-11-23 05:06:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 05:06:22] Running /usr/bin/apptainer --version
[2025-11-23 05:06:22] apptainer version 1.3.2-1.el7
[2025-11-23 05:06:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 05:06:23] c-9-34.aglt2.org
[2025-11-23 05:06:23] apptainer works
[2025-11-23 05:06:23] Set ATHENA_PROC_NUMBER=8
[2025-11-23 05:06:23] Set ATHENA_CORE_NUMBER=8
[2025-11-23 05:06:23] Starting ATLAS job with PandaID=6895330863
[2025-11-23 05:06:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:22:25]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:22:25] 2025-11-24 03:21:43,509 | INFO     | monitor loop #4288: job 0:6895330863 is in state 'finished'
[2025-11-23 22:22:25] 2025-11-24 03:21:43,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,355 | INFO     | time since job start (62111s) is within the limit (172800.0s)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,514 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 22:22:25] 2025-11-24 03:21:45,519 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9119062500013
[2025-11-23 22:22:25] 2025-11-24 03:21:45,523 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895330863/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,524 | INFO     | extracted standard info from prmon json
[2025-11-23 22:22:25] 2025-11-24 03:21:45,524 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:22:25] 2025-11-24 03:21:45,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:22:25] 2025-11-24 03:21:45,544 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:22:25] 2025-11-24 03:21:45,544 | INFO     | sum of square deviations: 327131588749.6008
[2025-11-23 22:22:25] 2025-11-24 03:21:45,565 | INFO     | sum of deviations: 1757623098306.4705
[2025-11-23 22:22:25] 2025-11-24 03:21:45,566 | INFO     | mean x: 1763923440.169941
[2025-11-23 22:22:25] 2025-11-24 03:21:45,566 | INFO     | mean y: 2860141.858546169
[2025-11-23 22:22:25] 2025-11-24 03:21:45,566 | INFO     | intersect: -9474404325.132439
[2025-11-23 22:22:25] 2025-11-24 03:21:45,567 | INFO     | chi2: 5.157508993193304
[2025-11-23 22:22:25] 2025-11-24 03:21:45,569 | INFO     | sum of square deviations: 322335232404.8453
[2025-11-23 22:22:25] 2025-11-24 03:21:45,600 | INFO     | sum of deviations: 2028533382843.9285
[2025-11-23 22:22:25] 2025-11-24 03:21:45,600 | INFO     | mean x: 1763923287.6732478
[2025-11-23 22:22:25] 2025-11-24 03:21:45,600 | INFO     | mean y: 2868750.8608094766
[2025-11-23 22:22:25] 2025-11-24 03:21:45,600 | INFO     | intersect: -11097926055.606058
[2025-11-23 22:22:25] 2025-11-24 03:21:45,602 | INFO     | chi2: 3.0335256030172975
[2025-11-23 22:22:25] 2025-11-24 03:21:45,602 | INFO     | current chi2=3.0335256030172975 (change=41.18234971532117 %)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,603 | INFO     | sum of square deviations: 317585993222.56696
[2025-11-23 22:22:25] 2025-11-24 03:21:45,634 | INFO     | sum of deviations: 2174897880411.512
[2025-11-23 22:22:25] 2025-11-24 03:21:45,634 | INFO     | mean x: 1763923135.1765873
[2025-11-23 22:22:25] 2025-11-24 03:21:45,634 | INFO     | mean y: 2873449.165674603
[2025-11-23 22:22:25] 2025-11-24 03:21:45,634 | INFO     | intersect: -12076855410.966518
[2025-11-23 22:22:25] 2025-11-24 03:21:45,635 | INFO     | chi2: 2.323228573307619
[2025-11-23 22:22:25] 2025-11-24 03:21:45,636 | INFO     | current chi2=2.323228573307619 (change=23.41490142701223 %)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,636 | INFO     | right removable region: 1007
[2025-11-23 22:22:25] 2025-11-24 03:21:45,637 | INFO     | sum of square deviations: 322334816384.8454
[2025-11-23 22:22:25] 2025-11-24 03:21:45,668 | INFO     | sum of deviations: 1513948028789.4763
[2025-11-23 22:22:25] 2025-11-24 03:21:45,669 | INFO     | mean x: 1763923592.6732478
[2025-11-23 22:22:25] 2025-11-24 03:21:45,669 | INFO     | mean y: 2867877.4787759134
[2025-11-23 22:22:25] 2025-11-24 03:21:45,669 | INFO     | intersect: -8281960537.936754
[2025-11-23 22:22:25] 2025-11-24 03:21:45,670 | INFO     | chi2: 3.29363226185204
[2025-11-23 22:22:25] 2025-11-24 03:21:45,670 | INFO     | current chi2=3.29363226185204 (change=36.13908834286361 %)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,672 | INFO     | sum of square deviations: 317585222853.91925
[2025-11-23 22:22:25] 2025-11-24 03:21:45,692 | INFO     | sum of deviations: 1426625748980.6436
[2025-11-23 22:22:25] 2025-11-24 03:21:45,692 | INFO     | mean x: 1763923745.1755953
[2025-11-23 22:22:25] 2025-11-24 03:21:45,692 | INFO     | mean y: 2870680.798611111
[2025-11-23 22:22:25] 2025-11-24 03:21:45,693 | INFO     | intersect: -7920857669.948299
[2025-11-23 22:22:25] 2025-11-24 03:21:45,693 | INFO     | chi2: 3.1805967866403675
[2025-11-23 22:22:25] 2025-11-24 03:21:45,693 | INFO     | current chi2=3.1805967866403675 (change=3.431939762094502 %)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,694 | INFO     | left removable region: 20
[2025-11-23 22:22:25] 2025-11-24 03:21:45,694 | INFO     | sum of square deviations: 298147221791.37396
[2025-11-23 22:22:25] 2025-11-24 03:21:45,721 | INFO     | sum of deviations: 1728260802982.5996
[2025-11-23 22:22:25] 2025-11-24 03:21:45,721 | INFO     | mean x: 1763923714.6838906
[2025-11-23 22:22:25] 2025-11-24 03:21:45,722 | INFO     | mean y: 2889254.7294832827
[2025-11-23 22:22:25] 2025-11-24 03:21:45,722 | INFO     | intersect: -10221992926.707739
[2025-11-23 22:22:25] 2025-11-24 03:21:45,723 | INFO     | chi2: 0.18428552802413034
[2025-11-23 22:22:25] 2025-11-24 03:21:45,723 | INFO     | current memory leak: 5.80 B/s (using 987 data points, chi2=0.18)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,724 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,725 | INFO     | ..............................
[2025-11-23 22:22:25] 2025-11-24 03:21:45,725 | INFO     | . Timing measurements:
[2025-11-23 22:22:25] 2025-11-24 03:21:45,725 | INFO     | . get job = 0 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,725 | INFO     | . initial setup = 2 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,725 | INFO     | . payload setup = 5 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,725 | INFO     | . stage-in = 0 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,726 | INFO     | . payload execution = 62073 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,726 | INFO     | . stage-out = 4 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,726 | INFO     | . log creation = 0 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,726 | INFO     | ..............................
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | 
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | job summary report
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | --------------------------------------------------
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | PanDA job id: 6895330863
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | task id: 47556137
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | errors: (none)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | pilot state: finished 
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | transexitcode: 0
[2025-11-23 22:22:25] 2025-11-24 03:21:45,804 | INFO     | exeerrorcode: 0
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | exeerrordiag: 
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | exitcode: 0
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | exitmsg: OK
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | cpuconsumptiontime: 476549 s
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | nevents: 1000
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | neventsw: 0
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | pid: 2854
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | pgrp: 2854
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | corecount: 8
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | event service: False
[2025-11-23 22:22:25] 2025-11-24 03:21:45,805 | INFO     | sizes: {0: 2298693, 1: 2298835, 4: 2299097, 11: 2299125, 62082: 2351983, 62083: 2351982, 62087: 2361160, 62090: 2361216, 62096: 2361462}
[2025-11-23 22:22:25] 2025-11-24 03:21:45,806 | INFO     | --------------------------------------------------
[2025-11-23 22:22:25] 2025-11-24 03:21:45,806 | INFO     | 
[2025-11-23 22:22:25] 2025-11-24 03:21:45,806 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 22:22:25] 2025-11-24 03:21:45,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:22:25] 2025-11-24 03:21:45,823 | INFO     | job 6895330863 has completed (purged errors)
[2025-11-23 22:22:25] 2025-11-24 03:21:45,823 | INFO     | overall cleanup function is called
[2025-11-23 22:22:25] 2025-11-24 03:21:46,838 | INFO     | --- collectZombieJob: --- 10, [2854]
[2025-11-23 22:22:25] 2025-11-24 03:21:46,839 | INFO     | zombie collector waiting for pid 2854
[2025-11-23 22:22:25] 2025-11-24 03:21:46,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:22:25] 2025-11-24 03:21:46,839 | INFO     | collected zombie processes
[2025-11-23 22:22:25] 2025-11-24 03:21:46,839 | INFO     | will attempt to kill all subprocesses of pid=2854
[2025-11-23 22:22:25] 2025-11-24 03:21:47,075 | INFO     | process IDs to be killed: [2854] (in reverse order)
[2025-11-23 22:22:25] 2025-11-24 03:21:47,252 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:22:25] 2025-11-24 03:21:47,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:22:25] 2025-11-24 03:21:47,264 | INFO     | did not find any defunct processes belonging to 2854
[2025-11-23 22:22:25] 2025-11-24 03:21:47,276 | INFO     | did not find any defunct processes belonging to 2854
[2025-11-23 22:22:25] 2025-11-24 03:21:47,280 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:22:25] 2025-11-24 03:21:47,280 | INFO     | ready for new job
[2025-11-23 22:22:25] 2025-11-24 03:21:47,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:22:25] 2025-11-24 03:21:47,285 | INFO     | ***************************************
[2025-11-23 22:22:25] 2025-11-24 03:21:47,285 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:22:25] 2025-11-24 03:21:47,286 | INFO     | ***************************************
[2025-11-23 22:22:25] 2025-11-24 03:21:47,286 | INFO     | 
[2025-11-23 22:22:25] 2025-11-24 03:21:47,287 | INFO     | architecture information:
[2025-11-23 22:22:25] 2025-11-24 03:21:47,288 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:22:25] 2025-11-24 03:21:47,302 | INFO     | cat /etc/os-release:
[2025-11-23 22:22:25] NAME="CentOS Linux"
[2025-11-23 22:22:25] VERSION="7 (Core)"
[2025-11-23 22:22:25] ID="centos"
[2025-11-23 22:22:25] ID_LIKE="rhel fedora"
[2025-11-23 22:22:25] VERSION_ID="7"
[2025-11-23 22:22:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:22:25] ANSI_COLOR="0;31"
[2025-11-23 22:22:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:22:25] HOME_URL="https://www.centos.org/"
[2025-11-23 22:22:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:22:25] 
[2025-11-23 22:22:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:22:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:22:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:22:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:22:25] 
[2025-11-23 22:22:25] 2025-11-24 03:21:47,302 | INFO     | ***************************************
[2025-11-23 22:22:25] 2025-11-24 03:21:47,806 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 22:22:25] 2025-11-24 03:21:47,847 | INFO     | sufficient remaining disk space (101127815168 B)
[2025-11-23 22:22:25] 2025-11-24 03:21:47,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:22:25] 2025-11-24 03:21:47,847 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:22:25] 2025-11-24 03:21:47,847 | INFO     | update_server=False
[2025-11-23 22:22:25] 2025-11-24 03:21:47,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:22:25] 2025-11-24 03:21:47,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:22:25] 2025-11-24 03:21:47,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:22:25] 2025-11-24 03:21:47,848 | INFO     | aborting loop
[2025-11-23 22:22:25] 2025-11-24 03:21:47,982 | INFO     | all job control threads have been joined
[2025-11-23 22:22:25] 2025-11-24 03:21:48,069 | INFO     | all data control threads have been joined
[2025-11-23 22:22:25] 2025-11-24 03:21:48,778 | INFO     | all payload control threads have been joined
[2025-11-23 22:22:25] 2025-11-24 03:21:48,852 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:48,854 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:48,971 | INFO     | [job] validate thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:48,988 | INFO     | [job] control thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:49,074 | INFO     | [data] control thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:49,780 | INFO     | [payload] control thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:49,853 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:49,911 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:49,992 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:50,096 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:50,106 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:50,130 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:50,134 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:50,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:22:25] 2025-11-24 03:21:50,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:50,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:22:25] 2025-11-24 03:21:51,822 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:21:54,208 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:22:25] 2025-11-24 03:22:18,782 | INFO     | PID=43939 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 22:22:25] 2025-11-24 03:22:18,782 | INFO     | .. there are 4 such processes running
[2025-11-23 22:22:25] 2025-11-24 03:22:18,782 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:22:25] 2025-11-24 03:22:18,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:22:25] 2025-11-24 03:22:18,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:22:25] 2025-11-24 03:22:19,191 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:22:25] 2025-11-24 03:22:20,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077025638208)>', '<ExcThread(monitor, started 140076583474944)>']
[2025-11-23 22:22:25] 2025-11-24 03:22:20,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:22:25] 2025-11-24 03:22:20,793 | INFO     | [monitor] control thread has ended
[2025-11-23 22:22:25] 2025-11-24 03:22:25,397 | INFO     | all workflow threads have been joined
[2025-11-23 22:22:25] 2025-11-24 03:22:25,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:22:25] 2025-11-24 03:22:25,398 | INFO     | traces error code: 0
[2025-11-23 22:22:25] 2025-11-24 03:22:25,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:22:25] 2025-11-24 03:22:25,495 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:22:25] 2025-11-24 03:22:25,497 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:22:25] 2025-11-24 03:22:25,504 [wrapper] pilotpid: 43939
[2025-11-23 22:22:25] 2025-11-24 03:22:25,515 [wrapper] Pilot exit status: 0
[2025-11-23 22:22:25] 2025-11-24 03:22:25,524 [wrapper] pandaids: 6895330863
[2025-11-23 22:22:25] 2025-11-24 03:22:25,602 [wrapper] cleanup supervisor_pilot 39266 43940
[2025-11-23 22:22:25] 2025-11-24 03:22:25,605 [wrapper] Test setup, not cleaning
[2025-11-23 22:22:25] 2025-11-24 03:22:25,608 [wrapper] apfmon messages muted
[2025-11-23 22:22:25] 2025-11-24 03:22:25,610 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:22:25] 2025-11-24 03:22:25,613 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:22:25]  *** Error codes and diagnostics ***
[2025-11-23 22:22:25]     "exeErrorCode": 0,
[2025-11-23 22:22:25]     "exeErrorDiag": "",
[2025-11-23 22:22:25]     "pilotErrorCode": 0,
[2025-11-23 22:22:25]     "pilotErrorDiag": "",
[2025-11-23 22:22:25]  *** Listing of results directory ***
[2025-11-23 22:22:25] total 1316660
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 16:47 queuedata.json
[2025-11-23 22:22:25] -rwx------ 1 boincer umatlas     36292 Nov 21 16:48 runpilot2-wrapper.sh
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas       100 Nov 23 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:22:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 05:06 run_atlas
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas       105 Nov 23 05:06 job.xml
[2025-11-23 22:22:25] -rw-r--r-- 2 boincer umatlas 407969210 Nov 23 05:06 EVNT.47483658._000146.pool.root.1
[2025-11-23 22:22:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:06 start_atlas.sh
[2025-11-23 22:22:25] drwxrwx--x 2 boincer umatlas      4096 Nov 23 05:06 shared
[2025-11-23 22:22:25] -rw-r--r-- 2 boincer umatlas    611280 Nov 23 05:06 input.tar.gz
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas         0 Nov 23 05:06 boinc_lockfile
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 05:06 pandaJob.out
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas        57 Nov 23 05:06 setup.sh.local
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas    989784 Nov 23 05:06 agis_schedconf.cvmfs.json
[2025-11-23 22:22:25] drwx------ 7 boincer umatlas      4096 Nov 23 05:06 pilot3
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas       532 Nov 23 22:09 boinc_task_state.xml
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas      6038 Nov 23 22:09 init_data.xml
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas 914914604 Nov 23 22:20 HITS.47556137._001455.pool.root.1
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas      1063 Nov 23 22:21 memory_monitor_summary.json
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas   1526164 Nov 23 22:21 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas   2220559 Nov 23 22:21 log.47556137._001455.job.log.tgz.1
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas        95 Nov 23 22:21 pilot_heartbeat.json
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas      8642 Nov 23 22:21 heartbeat.json
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 22:22 boinc_mmap_file
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas        29 Nov 23 22:22 wrapper_checkpoint.txt
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas      4822 Nov 23 22:22 pilotlog.txt
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas   8482422 Nov 23 22:22 log.47556137._001455.job.log.1
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas       353 Nov 23 22:22 output.list
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas       620 Nov 23 22:22 runtime_log
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas  10721280 Nov 23 22:22 result.tar.gz
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas      9333 Nov 23 22:22 runtime_log.err
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas       665 Nov 23 22:22 7gtNDmQAog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQpHKDmoWoyNm.diag
[2025-11-23 22:22:25] -rw-r--r-- 1 boincer umatlas     21317 Nov 23 22:22 stderr.txt
[2025-11-23 22:22:25] HITS file was successfully produced:
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas 914914604 Nov 23 22:20 shared/HITS.pool.root.1
[2025-11-23 22:22:25]  *** Contents of shared directory: ***
[2025-11-23 22:22:25] total 1302976
[2025-11-23 22:22:25] -rw-r--r-- 2 boincer umatlas 407969210 Nov 23 05:06 ATLAS.root_0
[2025-11-23 22:22:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 05:06 start_atlas.sh
[2025-11-23 22:22:25] -rw-r--r-- 2 boincer umatlas    611280 Nov 23 05:06 input.tar.gz
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas 914914604 Nov 23 22:20 HITS.pool.root.1
[2025-11-23 22:22:25] -rw------- 1 boincer umatlas  10721280 Nov 23 22:22 result.tar.gz
22:22:27 (40026): run_atlas exited; CPU time 476878.977101
22:22:27 (40026): called boinc_finish(0)

</stderr_txt>
]]>

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