Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:32:58 (15520): wrapper (7.7.26015): starting
04:32:58 (15520): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 04:32:58] Arguments: --nthreads 8
[2025-11-23 04:32:58] Threads: 8
[2025-11-23 04:32:58] Checking for CVMFS
[2025-11-23 04:32:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 04:32:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 04:32:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 04:32:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 04:32:59] 2.11.2.0 8539 113219 145636 153203 3 57 13859715 18432000 1885 130560 0 84925908 99.974 4719237 31505 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 04:32:59] CVMFS is ok
[2025-11-23 04:32:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 04:32:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 04:32:59] Further information can be found at the LHC@home message board.
[2025-11-23 04:32:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 04:32:59] Checking for apptainer binary...
[2025-11-23 04:32:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 04:32:59] Running /usr/bin/apptainer --version
[2025-11-23 04:32:59] apptainer version 1.3.2-1.el7
[2025-11-23 04:32:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 04:32:59] c-206-1.aglt2.org
[2025-11-23 04:32:59] apptainer works
[2025-11-23 04:32:59] Set ATHENA_PROC_NUMBER=8
[2025-11-23 04:32:59] Set ATHENA_CORE_NUMBER=8
[2025-11-23 04:32:59] Starting ATLAS job with PandaID=6895339646
[2025-11-23 04:32:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:47:10]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:47:10] 2025-11-24 04:46:21,728 | INFO     | monitor loop #4954: job 0:6895339646 is in state 'finished'
[2025-11-23 23:47:10] 2025-11-24 04:46:21,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,335 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 23:47:10] 2025-11-24 04:46:23,341 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2483.5
[2025-11-23 23:47:10] 2025-11-24 04:46:23,346 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895339646/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,347 | INFO     | extracted standard info from prmon json
[2025-11-23 23:47:10] 2025-11-24 04:46:23,347 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:47:10] 2025-11-24 04:46:23,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:47:10] 2025-11-24 04:46:23,377 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:47:10] 2025-11-24 04:46:23,379 | INFO     | sum of square deviations: 452184708523.0415
[2025-11-23 23:47:10] 2025-11-24 04:46:23,386 | INFO     | time since job start (69193s) is within the limit (172800.0s)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,414 | INFO     | sum of deviations: 1961825349350.6953
[2025-11-23 23:47:10] 2025-11-24 04:46:23,414 | INFO     | mean x: 1763924974.0837743
[2025-11-23 23:47:10] 2025-11-24 04:46:23,414 | INFO     | mean y: 3042478.7716049384
[2025-11-23 23:47:10] 2025-11-24 04:46:23,414 | INFO     | intersect: -7649831807.520151
[2025-11-23 23:47:10] 2025-11-24 04:46:23,415 | INFO     | chi2: 5.8029773017468855
[2025-11-23 23:47:10] 2025-11-24 04:46:23,416 | INFO     | sum of square deviations: 446229942963.8297
[2025-11-23 23:47:10] 2025-11-24 04:46:23,439 | INFO     | sum of deviations: 2325565687268.036
[2025-11-23 23:47:10] 2025-11-24 04:46:23,439 | INFO     | mean x: 1763924821.5863595
[2025-11-23 23:47:10] 2025-11-24 04:46:23,439 | INFO     | mean y: 3051791.7945084143
[2025-11-23 23:47:10] 2025-11-24 04:46:23,439 | INFO     | intersect: -9189793970.091394
[2025-11-23 23:47:10] 2025-11-24 04:46:23,440 | INFO     | chi2: 3.1655062969677132
[2025-11-23 23:47:10] 2025-11-24 04:46:23,440 | INFO     | current chi2=3.1655062969677132 (change=45.45030710330725 %)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,441 | INFO     | sum of square deviations: 440327690017.1032
[2025-11-23 23:47:10] 2025-11-24 04:46:23,482 | INFO     | sum of deviations: 2498889416981.9272
[2025-11-23 23:47:10] 2025-11-24 04:46:23,482 | INFO     | mean x: 1763924669.088968
[2025-11-23 23:47:10] 2025-11-24 04:46:23,482 | INFO     | mean y: 3056269.050711744
[2025-11-23 23:47:10] 2025-11-24 04:46:23,482 | INFO     | intersect: -10007335509.328157
[2025-11-23 23:47:10] 2025-11-24 04:46:23,483 | INFO     | chi2: 2.4815390841232294
[2025-11-23 23:47:10] 2025-11-24 04:46:23,484 | INFO     | current chi2=2.4815390841232294 (change=21.606882080748548 %)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,484 | INFO     | right removable region: 1123
[2025-11-23 23:47:10] 2025-11-24 04:46:23,485 | INFO     | sum of square deviations: 446229608074.0018
[2025-11-23 23:47:10] 2025-11-24 04:46:23,507 | INFO     | sum of deviations: 1642940429190.2788
[2025-11-23 23:47:10] 2025-11-24 04:46:23,507 | INFO     | mean x: 1763925126.5854738
[2025-11-23 23:47:10] 2025-11-24 04:46:23,507 | INFO     | mean y: 3050635.919397697
[2025-11-23 23:47:10] 2025-11-24 04:46:23,507 | INFO     | intersect: -6491417351.17852
[2025-11-23 23:47:10] 2025-11-24 04:46:23,508 | INFO     | chi2: 3.6860238663788607
[2025-11-23 23:47:10] 2025-11-24 04:46:23,509 | INFO     | current chi2=3.6860238663788607 (change=36.480470718552574 %)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,510 | INFO     | sum of square deviations: 440327089350.62854
[2025-11-23 23:47:10] 2025-11-24 04:46:23,544 | INFO     | sum of deviations: 1564648567670.2312
[2025-11-23 23:47:10] 2025-11-24 04:46:23,545 | INFO     | mean x: 1763925279.086299
[2025-11-23 23:47:10] 2025-11-24 04:46:23,545 | INFO     | mean y: 3052658.2553380784
[2025-11-23 23:47:10] 2025-11-24 04:46:23,545 | INFO     | intersect: -6264840524.219267
[2025-11-23 23:47:10] 2025-11-24 04:46:23,547 | INFO     | chi2: 3.62807402296433
[2025-11-23 23:47:10] 2025-11-24 04:46:23,547 | INFO     | current chi2=3.62807402296433 (change=1.5721505208662871 %)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,547 | INFO     | left removable region: 20
[2025-11-23 23:47:10] 2025-11-24 04:46:23,549 | INFO     | sum of square deviations: 416105348424.2244
[2025-11-23 23:47:10] 2025-11-24 04:46:23,579 | INFO     | sum of deviations: 2032613251536.5662
[2025-11-23 23:47:10] 2025-11-24 04:46:23,579 | INFO     | mean x: 1763925248.5929284
[2025-11-23 23:47:10] 2025-11-24 04:46:23,579 | INFO     | mean y: 3070099.277425204
[2025-11-23 23:47:10] 2025-11-24 04:46:23,579 | INFO     | intersect: -8613444561.222881
[2025-11-23 23:47:10] 2025-11-24 04:46:23,580 | INFO     | chi2: 0.16502967319514616
[2025-11-23 23:47:10] 2025-11-24 04:46:23,580 | INFO     | current memory leak: 4.88 B/s (using 1103 data points, chi2=0.17)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,581 | INFO     | could have reported an average CPU frequency of 2630 MHz (41 samples)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,582 | INFO     | ..............................
[2025-11-23 23:47:10] 2025-11-24 04:46:23,582 | INFO     | . Timing measurements:
[2025-11-23 23:47:10] 2025-11-24 04:46:23,582 | INFO     | . get job = 0 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,582 | INFO     | . initial setup = 2 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,582 | INFO     | . payload setup = 6 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,583 | INFO     | . stage-in = 0 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,583 | INFO     | . payload execution = 69155 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,583 | INFO     | . stage-out = 4 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,583 | INFO     | . log creation = 0 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,583 | INFO     | ..............................
[2025-11-23 23:47:10] 2025-11-24 04:46:23,763 | INFO     | 
[2025-11-23 23:47:10] 2025-11-24 04:46:23,763 | INFO     | job summary report
[2025-11-23 23:47:10] 2025-11-24 04:46:23,763 | INFO     | --------------------------------------------------
[2025-11-23 23:47:10] 2025-11-24 04:46:23,763 | INFO     | PanDA job id: 6895339646
[2025-11-23 23:47:10] 2025-11-24 04:46:23,763 | INFO     | task id: 47556137
[2025-11-23 23:47:10] 2025-11-24 04:46:23,764 | INFO     | errors: (none)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:47:10] 2025-11-24 04:46:23,764 | INFO     | pilot state: finished 
[2025-11-23 23:47:10] 2025-11-24 04:46:23,764 | INFO     | transexitcode: 0
[2025-11-23 23:47:10] 2025-11-24 04:46:23,764 | INFO     | exeerrorcode: 0
[2025-11-23 23:47:10] 2025-11-24 04:46:23,764 | INFO     | exeerrordiag: 
[2025-11-23 23:47:10] 2025-11-24 04:46:23,765 | INFO     | exitcode: 0
[2025-11-23 23:47:10] 2025-11-24 04:46:23,765 | INFO     | exitmsg: OK
[2025-11-23 23:47:10] 2025-11-24 04:46:23,765 | INFO     | cpuconsumptiontime: 532524 s
[2025-11-23 23:47:10] 2025-11-24 04:46:23,765 | INFO     | nevents: 1000
[2025-11-23 23:47:10] 2025-11-24 04:46:23,765 | INFO     | neventsw: 0
[2025-11-23 23:47:10] 2025-11-24 04:46:23,766 | INFO     | pid: 25692
[2025-11-23 23:47:10] 2025-11-24 04:46:23,766 | INFO     | pgrp: 25692
[2025-11-23 23:47:10] 2025-11-24 04:46:23,766 | INFO     | corecount: 8
[2025-11-23 23:47:10] 2025-11-24 04:46:23,766 | INFO     | event service: False
[2025-11-23 23:47:10] 2025-11-24 04:46:23,766 | INFO     | sizes: {0: 2298591, 1: 2298733, 4: 2298995, 11: 2299023, 69165: 2355225, 69166: 2355224, 69170: 2364402, 69173: 2364458, 69178: 2364800}
[2025-11-23 23:47:10] 2025-11-24 04:46:23,766 | INFO     | --------------------------------------------------
[2025-11-23 23:47:10] 2025-11-24 04:46:23,767 | INFO     | 
[2025-11-23 23:47:10] 2025-11-24 04:46:23,767 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 23:47:10] 2025-11-24 04:46:23,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,805 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:47:10] 2025-11-24 04:46:23,805 | INFO     | job 6895339646 has completed (purged errors)
[2025-11-23 23:47:10] 2025-11-24 04:46:23,806 | INFO     | overall cleanup function is called
[2025-11-23 23:47:10] 2025-11-24 04:46:24,821 | INFO     | --- collectZombieJob: --- 10, [25692]
[2025-11-23 23:47:10] 2025-11-24 04:46:24,821 | INFO     | zombie collector waiting for pid 25692
[2025-11-23 23:47:10] 2025-11-24 04:46:24,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:47:10] 2025-11-24 04:46:24,822 | INFO     | collected zombie processes
[2025-11-23 23:47:10] 2025-11-24 04:46:24,822 | INFO     | will attempt to kill all subprocesses of pid=25692
[2025-11-23 23:47:10] 2025-11-24 04:46:24,995 | INFO     | process IDs to be killed: [25692] (in reverse order)
[2025-11-23 23:47:10] 2025-11-24 04:46:25,042 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:47:10] 2025-11-24 04:46:25,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:47:10] 2025-11-24 04:46:25,045 | INFO     | did not find any defunct processes belonging to 25692
[2025-11-23 23:47:10] 2025-11-24 04:46:25,048 | INFO     | did not find any defunct processes belonging to 25692
[2025-11-23 23:47:10] 2025-11-24 04:46:25,049 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:47:10] 2025-11-24 04:46:25,049 | INFO     | ready for new job
[2025-11-23 23:47:10] 2025-11-24 04:46:25,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:47:10] 2025-11-24 04:46:25,053 | INFO     | ***************************************
[2025-11-23 23:47:10] 2025-11-24 04:46:25,053 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:47:10] 2025-11-24 04:46:25,053 | INFO     | ***************************************
[2025-11-23 23:47:10] 2025-11-24 04:46:25,054 | INFO     | 
[2025-11-23 23:47:10] 2025-11-24 04:46:25,054 | INFO     | architecture information:
[2025-11-23 23:47:10] 2025-11-24 04:46:25,055 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:47:10] 2025-11-24 04:46:25,066 | INFO     | cat /etc/os-release:
[2025-11-23 23:47:10] NAME="CentOS Linux"
[2025-11-23 23:47:10] VERSION="7 (Core)"
[2025-11-23 23:47:10] ID="centos"
[2025-11-23 23:47:10] ID_LIKE="rhel fedora"
[2025-11-23 23:47:10] VERSION_ID="7"
[2025-11-23 23:47:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:47:10] ANSI_COLOR="0;31"
[2025-11-23 23:47:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:47:10] HOME_URL="https://www.centos.org/"
[2025-11-23 23:47:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:47:10] 
[2025-11-23 23:47:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:47:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:47:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:47:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:47:10] 
[2025-11-23 23:47:10] 2025-11-24 04:46:25,066 | INFO     | ***************************************
[2025-11-23 23:47:10] 2025-11-24 04:46:25,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 23:47:10] 2025-11-24 04:46:25,584 | INFO     | sufficient remaining disk space (26653753344 B)
[2025-11-23 23:47:10] 2025-11-24 04:46:25,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:47:10] 2025-11-24 04:46:25,584 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:47:10] 2025-11-24 04:46:25,584 | INFO     | update_server=False
[2025-11-23 23:47:10] 2025-11-24 04:46:25,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:47:10] 2025-11-24 04:46:25,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:47:10] 2025-11-24 04:46:25,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:47:10] 2025-11-24 04:46:25,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:47:10] 2025-11-24 04:46:25,585 | INFO     | aborting loop
[2025-11-23 23:47:10] 2025-11-24 04:46:25,845 | INFO     | all job control threads have been joined
[2025-11-23 23:47:10] 2025-11-24 04:46:25,905 | INFO     | all data control threads have been joined
[2025-11-23 23:47:10] 2025-11-24 04:46:25,963 | INFO     | all payload control threads have been joined
[2025-11-23 23:47:10] 2025-11-24 04:46:26,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:47:10] 2025-11-24 04:46:26,589 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:26,590 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:26,591 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:26,850 | INFO     | [job] control thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:26,910 | INFO     | [data] control thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:26,968 | INFO     | [payload] control thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:27,016 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:27,112 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:27,457 | INFO     | [job] validate thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:27,598 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:27,671 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:27,809 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:27,912 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:28,024 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:28,413 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:29,591 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:47:10] 2025-11-24 04:46:56,601 | INFO     | PID=19277 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 23:47:10] 2025-11-24 04:46:56,601 | INFO     | .. there are 3 such processes running
[2025-11-23 23:47:10] 2025-11-24 04:46:56,601 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:47:10] 2025-11-24 04:46:56,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:47:10] 2025-11-24 04:46:56,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:47:10] 2025-11-24 04:47:04,842 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:47:10] 2025-11-24 04:47:04,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784799532864)>', '<ExcThread(monitor, started 139784492128000)>']
[2025-11-23 23:47:10] 2025-11-24 04:47:05,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:47:10] 2025-11-24 04:47:05,647 | INFO     | [monitor] control thread has ended
[2025-11-23 23:47:10] 2025-11-24 04:47:09,928 | INFO     | all workflow threads have been joined
[2025-11-23 23:47:10] 2025-11-24 04:47:09,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:47:10] 2025-11-24 04:47:09,928 | INFO     | traces error code: 0
[2025-11-23 23:47:10] 2025-11-24 04:47:09,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:47:10] 2025-11-24 04:47:10,035 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:47:10] 2025-11-24 04:47:10,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:47:10] 2025-11-24 04:47:10,039 [wrapper] pilotpid: 19277
[2025-11-23 23:47:10] 2025-11-24 04:47:10,041 [wrapper] Pilot exit status: 0
[2025-11-23 23:47:10] 2025-11-24 04:47:10,049 [wrapper] pandaids: 6895339646
[2025-11-23 23:47:10] 2025-11-24 04:47:10,078 [wrapper] cleanup supervisor_pilot 27857 19278
[2025-11-23 23:47:10] 2025-11-24 04:47:10,081 [wrapper] Test setup, not cleaning
[2025-11-23 23:47:10] 2025-11-24 04:47:10,083 [wrapper] apfmon messages muted
[2025-11-23 23:47:10] 2025-11-24 04:47:10,086 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:47:10] 2025-11-24 04:47:10,088 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:47:10]  *** Error codes and diagnostics ***
[2025-11-23 23:47:10]     "exeErrorCode": 0,
[2025-11-23 23:47:10]     "exeErrorDiag": "",
[2025-11-23 23:47:10]     "pilotErrorCode": 0,
[2025-11-23 23:47:10]     "pilotErrorDiag": "",
[2025-11-23 23:47:10]  *** Listing of results directory ***
[2025-11-23 23:47:10] total 1315944
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 05:57 queuedata.json
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 05:57 pilot3.tar.gz
[2025-11-23 23:47:10] -rwx------ 1 boincer umatlas     36292 Nov 22 06:00 runpilot2-wrapper.sh
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas       100 Nov 23 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:47:10] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 04:32 run_atlas
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas       105 Nov 23 04:32 job.xml
[2025-11-23 23:47:10] -rw-r--r-- 2 boincer umatlas 408382281 Nov 23 04:32 EVNT.47483658._000354.pool.root.1
[2025-11-23 23:47:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 04:32 start_atlas.sh
[2025-11-23 23:47:10] drwxrwx--x 2 boincer umatlas      4096 Nov 23 04:32 shared
[2025-11-23 23:47:10] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 04:32 input.tar.gz
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas         0 Nov 23 04:32 boinc_lockfile
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 04:32 pandaJob.out
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas        57 Nov 23 04:33 setup.sh.local
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas    989784 Nov 23 04:33 agis_schedconf.cvmfs.json
[2025-11-23 23:47:10] drwx------ 5 boincer umatlas      4096 Nov 23 04:33 pilot3
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas       533 Nov 23 23:33 boinc_task_state.xml
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas      5953 Nov 23 23:45 init_data.xml
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas 911445666 Nov 23 23:45 HITS.47556137._003503.pool.root.1
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas      1069 Nov 23 23:46 memory_monitor_summary.json
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas   1526164 Nov 23 23:46 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas   2302401 Nov 23 23:46 log.47556137._003503.job.log.tgz.1
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas      8661 Nov 23 23:46 heartbeat.json
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas        95 Nov 23 23:46 pilot_heartbeat.json
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 23:47 boinc_mmap_file
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas        29 Nov 23 23:47 wrapper_checkpoint.txt
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas      4821 Nov 23 23:47 pilotlog.txt
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas   9582193 Nov 23 23:47 log.47556137._003503.job.log.1
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas       353 Nov 23 23:47 output.list
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas       620 Nov 23 23:47 runtime_log
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas  11909120 Nov 23 23:47 result.tar.gz
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas      9338 Nov 23 23:47 runtime_log.err
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas       667 Nov 23 23:47 gObKDmfW0g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE8JKDmgs976n.diag
[2025-11-23 23:47:10] -rw-r--r-- 1 boincer umatlas     21314 Nov 23 23:47 stderr.txt
[2025-11-23 23:47:10] HITS file was successfully produced:
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas 911445666 Nov 23 23:45 shared/HITS.pool.root.1
[2025-11-23 23:47:10]  *** Contents of shared directory: ***
[2025-11-23 23:47:10] total 1301128
[2025-11-23 23:47:10] -rw-r--r-- 2 boincer umatlas 408382281 Nov 23 04:32 ATLAS.root_0
[2025-11-23 23:47:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 04:32 start_atlas.sh
[2025-11-23 23:47:10] -rw-r--r-- 2 boincer umatlas    590098 Nov 23 04:32 input.tar.gz
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas 911445666 Nov 23 23:45 HITS.pool.root.1
[2025-11-23 23:47:10] -rw------- 1 boincer umatlas  11909120 Nov 23 23:47 result.tar.gz
23:47:11 (15520): run_atlas exited; CPU time 531414.616276
23:47:11 (15520): called boinc_finish(0)

</stderr_txt>
]]>

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