Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:34:04 (3140767): wrapper (7.7.26015): starting
11:34:04 (3140767): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 11:34:04] Arguments: --nthreads 3
[2025-11-23 11:34:04] Threads: 3
[2025-11-23 11:34:04] Checking for CVMFS
[2025-11-23 11:34:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 11:34:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 11:34:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 11:34:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 11:34:04] 2.9.2.0 2932062 46 58924 153205 2 88 34827251 36864000 0 130560 0 626084 99.997 4050 15283 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 11:34:04] CVMFS is ok
[2025-11-23 11:34:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:34:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:34:04] Further information can be found at the LHC@home message board.
[2025-11-23 11:34:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:34:04] Checking for apptainer binary...
[2025-11-23 11:34:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 11:34:04] Running /usr/bin/apptainer --version
[2025-11-23 11:34:04] apptainer version 1.4.1-1.1
[2025-11-23 11:34:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:34:04] thA335
[2025-11-23 11:34:04] apptainer works
[2025-11-23 11:34:04] Set ATHENA_PROC_NUMBER=3
[2025-11-23 11:34:04] Set ATHENA_CORE_NUMBER=3
[2025-11-23 11:34:04] Starting ATLAS job with PandaID=6895323662
[2025-11-23 11:34:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 11:38:19]  *** The last 200 lines of the pilot log: ***
[2025-11-23 11:38:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 11:38:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 11:38:20] 
[2025-11-23 11:38:20] 2025-11-23 10:37:27,510 | INFO     | ***************************************
[2025-11-23 11:38:20] 2025-11-23 10:37:28,013 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | INFO     | sufficient remaining disk space (827623211008 B)
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | INFO     | update_server=False
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 11:38:20] 2025-11-23 10:37:28,027 | INFO     | aborting loop
[2025-11-23 11:38:20] 2025-11-23 10:37:28,283 | INFO     | all job control threads have been joined
[2025-11-23 11:38:20] 2025-11-23 10:37:28,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 11:38:20] 2025-11-23 10:37:29,033 | INFO     | [job] retrieve thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:29,034 | INFO     | [job] queue monitor thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:29,034 | INFO     | [job] job monitor thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:29,059 | INFO     | [payload] failed_post thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:29,084 | INFO     | all data control threads have been joined
[2025-11-23 11:38:20] 2025-11-23 10:37:29,289 | INFO     | [job] control thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:29,436 | INFO     | all payload control threads have been joined
[2025-11-23 11:38:20] 2025-11-23 10:37:30,001 | INFO     | [data] copytool_in thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,008 | INFO     | [payload] validate_post thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,090 | INFO     | [data] control thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,176 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,275 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,401 | INFO     | [job] validate thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,442 | INFO     | [payload] control thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,472 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,520 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:30,761 | INFO     | [data] copytool_out thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:31,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 11:38:20] 2025-11-23 10:37:35,075 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 11:38:20] 2025-11-23 10:37:58,519 | INFO     | PID=3144489 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 11:38:20] 2025-11-23 10:37:58,519 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 11:38:20] 2025-11-23 10:37:58,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 11:38:20] 2025-11-23 10:37:58,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 11:38:20] 2025-11-23 10:38:13,599 | INFO     | [monitor] cgroup control has ended
[2025-11-23 11:38:20] 2025-11-23 10:38:14,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140026911250240)>', '<ExcThread(monitor, started 140026184718080)>']
[2025-11-23 11:38:20] 2025-11-23 10:38:15,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 11:38:20] 2025-11-23 10:38:15,605 | INFO     | [monitor] control thread has ended
[2025-11-23 11:38:20] 2025-11-23 10:38:19,872 | INFO     | all workflow threads have been joined
[2025-11-23 11:38:20] 2025-11-23 10:38:19,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 11:38:20] 2025-11-23 10:38:19,873 | INFO     | traces error code: 0
[2025-11-23 11:38:20] 2025-11-23 10:38:19,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 11:38:20] 2025-11-23 10:38:19,919 [wrapper] ==== pilot stdout END ====
[2025-11-23 11:38:20] 2025-11-23 10:38:19,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 11:38:20] 2025-11-23 10:38:19,925 [wrapper] pilotpid: 3144489
[2025-11-23 11:38:20] 2025-11-23 10:38:19,927 [wrapper] Pilot exit status: 0
[2025-11-23 11:38:20] 2025-11-23 10:38:19,934 [wrapper] pandaids: 6895323662
[2025-11-23 11:38:20] 2025-11-23 10:38:19,951 [wrapper] cleanup supervisor_pilot 3144495 3144490
[2025-11-23 11:38:20] 2025-11-23 10:38:19,954 [wrapper] Test setup, not cleaning
[2025-11-23 11:38:20] 2025-11-23 10:38:19,957 [wrapper] apfmon messages muted
[2025-11-23 11:38:20] 2025-11-23 10:38:19,959 [wrapper] ==== wrapper stdout END ====
[2025-11-23 11:38:20] 2025-11-23 10:38:19,962 [wrapper] ==== wrapper stderr END ====
[2025-11-23 11:38:20]  *** Error codes and diagnostics ***
[2025-11-23 11:38:20]     "exeErrorCode": 65,
[2025-11-23 11:38:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 11:38:20]     "pilotErrorCode": 1305,
[2025-11-23 11:38:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 11:38:20]  *** Listing of results directory ***
[2025-11-23 11:38:20] total 404052
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc    576529 Nov 21 13:50 pilot3.tar.gz
[2025-11-23 11:38:20] -rwx------ 1 boinc boinc     36292 Nov 21 14:10 runpilot2-wrapper.sh
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc      5112 Nov 21 14:10 queuedata.json
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc       100 Nov 23 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 11:38:20] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 11:34 run_atlas
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc       105 Nov 23 11:34 job.xml
[2025-11-23 11:38:20] -rw-r--r-- 2 boinc boinc 409541279 Nov 23 11:34 EVNT.47483658._000004.pool.root.1
[2025-11-23 11:38:20] -rw-r--r-- 2 boinc boinc    590098 Nov 23 11:34 input.tar.gz
[2025-11-23 11:38:20] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:34 start_atlas.sh
[2025-11-23 11:38:20] drwxrwx--x 2 boinc boinc      4096 Nov 23 11:34 shared
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:34 boinc_setup_complete
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc      6194 Nov 23 11:34 init_data.xml
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:34 boinc_lockfile
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc      2782 Nov 23 11:34 pandaJob.out
[2025-11-23 11:38:20] -rw------- 1 boinc boinc    989784 Nov 23 11:34 agis_schedconf.cvmfs.json
[2025-11-23 11:38:20] -rw------- 1 boinc boinc   1526164 Nov 23 11:34 agis_ddmendpoints.agis.ALL.json
[2025-11-23 11:38:20] drwx------ 5 boinc boinc      4096 Nov 23 11:34 pilot3
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc       523 Nov 23 11:35 boinc_task_state.xml
[2025-11-23 11:38:20] -rw------- 1 boinc boinc       960 Nov 23 11:35 memory_monitor_summary.json
[2025-11-23 11:38:20] -rw------- 1 boinc boinc     55885 Nov 23 11:35 log.47556137._000035.job.log.tgz.1
[2025-11-23 11:38:20] -rw------- 1 boinc boinc        95 Nov 23 11:37 pilot_heartbeat.json
[2025-11-23 11:38:20] -rw------- 1 boinc boinc      8411 Nov 23 11:37 heartbeat.json
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc      8192 Nov 23 11:38 boinc_mmap_file
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc        23 Nov 23 11:38 wrapper_checkpoint.txt
[2025-11-23 11:38:20] -rw------- 1 boinc boinc      4752 Nov 23 11:38 pilotlog.txt
[2025-11-23 11:38:20] -rw------- 1 boinc boinc     93228 Nov 23 11:38 log.47556137._000035.job.log.1
[2025-11-23 11:38:20] -rw------- 1 boinc boinc       186 Nov 23 11:38 output.list
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc       620 Nov 23 11:38 runtime_log
[2025-11-23 11:38:20] -rw------- 1 boinc boinc    174080 Nov 23 11:38 result.tar.gz
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc      8744 Nov 23 11:38 runtime_log.err
[2025-11-23 11:38:20] -rw------- 1 boinc boinc       649 Nov 23 11:38 e3DLDm44fg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmESJKDmwUBP2n.diag
[2025-11-23 11:38:20] -rw-r--r-- 1 boinc boinc      8468 Nov 23 11:38 stderr.txt
[2025-11-23 11:38:20] No HITS result produced
[2025-11-23 11:38:20]  *** Contents of shared directory: ***
[2025-11-23 11:38:20] total 400716
[2025-11-23 11:38:20] -rw-r--r-- 2 boinc boinc 409541279 Nov 23 11:34 ATLAS.root_0
[2025-11-23 11:38:20] -rw-r--r-- 2 boinc boinc    590098 Nov 23 11:34 input.tar.gz
[2025-11-23 11:38:20] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:34 start_atlas.sh
[2025-11-23 11:38:20] -rw------- 1 boinc boinc    174080 Nov 23 11:38 result.tar.gz
11:38:21 (3140767): run_atlas exited; CPU time 31.370614
11:38:21 (3140767): called boinc_finish(0)

</stderr_txt>
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