Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:26:27 (1442411): wrapper (7.7.26015): starting
10:26:27 (1442411): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 10:26:27] Arguments: --nthreads 3
[2025-11-26 10:26:27] Threads: 3
[2025-11-26 10:26:27] Checking for CVMFS
[2025-11-26 10:26:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:26:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:26:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:26:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:26:27] 2.9.2.0 1300652 983 59816 153316 2 81 29111065 36864000 0 130560 0 364859 99.979 40972 26902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 10:26:27] CVMFS is ok
[2025-11-26 10:26:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:26:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:26:27] Further information can be found at the LHC@home message board.
[2025-11-26 10:26:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:26:27] Checking for apptainer binary...
[2025-11-26 10:26:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:26:27] Running /usr/bin/apptainer --version
[2025-11-26 10:26:27] apptainer version 1.4.1-1.1
[2025-11-26 10:26:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:26:27] thA305
[2025-11-26 10:26:27] apptainer works
[2025-11-26 10:26:27] Set ATHENA_PROC_NUMBER=3
[2025-11-26 10:26:27] Set ATHENA_CORE_NUMBER=3
[2025-11-26 10:26:27] Starting ATLAS job with PandaID=6895323835
[2025-11-26 10:26:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:45:14]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:45:14] 2025-11-26 17:44:19,995 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 18:45:14] 2025-11-26 17:44:20,009 | INFO     | sufficient remaining disk space (227336519680 B)
[2025-11-26 18:45:14] 2025-11-26 17:44:20,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:45:14] 2025-11-26 17:44:20,009 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:45:14] 2025-11-26 17:44:20,009 | INFO     | update_server=False
[2025-11-26 18:45:14] 2025-11-26 17:44:20,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:45:14] 2025-11-26 17:44:20,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:45:14] 2025-11-26 17:44:20,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:45:14] 2025-11-26 17:44:20,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:45:14] 2025-11-26 17:44:20,114 | INFO     | aborting loop
[2025-11-26 18:45:14] 2025-11-26 17:44:20,159 | INFO     | all data control threads have been joined
[2025-11-26 18:45:14] 2025-11-26 17:44:20,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:45:14] 2025-11-26 17:44:20,722 | INFO     | all payload control threads have been joined
[2025-11-26 18:45:14] 2025-11-26 17:44:21,015 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:21,015 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:21,098 | INFO     | all job control threads have been joined
[2025-11-26 18:45:14] 2025-11-26 17:44:21,118 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:21,164 | INFO     | [data] control thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:21,271 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:21,474 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:21,728 | INFO     | [payload] control thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:21,989 | INFO     | [job] validate thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:22,015 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:22,032 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:22,088 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:22,103 | INFO     | [job] control thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:22,124 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:22,247 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:22,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:24,262 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:45:14] 2025-11-26 17:44:50,743 | INFO     | PID=1446140 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:45:14] 2025-11-26 17:44:50,743 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:45:14] 2025-11-26 17:44:50,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:45:14] 2025-11-26 17:44:50,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:45:14] 2025-11-26 17:45:08,661 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:45:14] 2025-11-26 17:45:09,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340597917504)>', '<ExcThread(monitor, started 140340111591168)>']
[2025-11-26 18:45:14] 2025-11-26 17:45:09,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:45:14] 2025-11-26 17:45:09,840 | INFO     | [monitor] control thread has ended
[2025-11-26 18:45:14] 2025-11-26 17:45:14,090 | INFO     | all workflow threads have been joined
[2025-11-26 18:45:14] 2025-11-26 17:45:14,091 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:45:14] 2025-11-26 17:45:14,092 | INFO     | traces error code: 0
[2025-11-26 18:45:14] 2025-11-26 17:45:14,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:45:14] 2025-11-26 17:45:14,143 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:45:14] 2025-11-26 17:45:14,146 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:45:14] 2025-11-26 17:45:14,148 [wrapper] pilotpid: 1446140
[2025-11-26 18:45:14] 2025-11-26 17:45:14,150 [wrapper] Pilot exit status: 0
[2025-11-26 18:45:14] 2025-11-26 17:45:14,157 [wrapper] pandaids: 6895323835
[2025-11-26 18:45:14] 2025-11-26 17:45:14,175 [wrapper] cleanup supervisor_pilot 1509728 1446141
[2025-11-26 18:45:14] 2025-11-26 17:45:14,177 [wrapper] Test setup, not cleaning
[2025-11-26 18:45:14] 2025-11-26 17:45:14,180 [wrapper] apfmon messages muted
[2025-11-26 18:45:14] 2025-11-26 17:45:14,182 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:45:14] 2025-11-26 17:45:14,184 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:45:14]  *** Error codes and diagnostics ***
[2025-11-26 18:45:14]     "exeErrorCode": 0,
[2025-11-26 18:45:14]     "exeErrorDiag": "",
[2025-11-26 18:45:14]     "pilotErrorCode": 0,
[2025-11-26 18:45:14]     "pilotErrorDiag": "",
[2025-11-26 18:45:14]  *** Listing of results directory ***
[2025-11-26 18:45:14] total 1314856
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc    576529 Nov 21 14:51 pilot3.tar.gz
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc      5112 Nov 21 15:09 queuedata.json
[2025-11-26 18:45:14] -rwx------ 1 boinc boinc     36292 Nov 21 15:10 runpilot2-wrapper.sh
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc       100 Nov 26 10:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:45:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 10:26 run_atlas
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc       105 Nov 26 10:26 job.xml
[2025-11-26 18:45:14] -rw-r--r-- 2 boinc boinc 410639819 Nov 26 10:26 EVNT.47483658._000015.pool.root.1
[2025-11-26 18:45:14] -rw-r--r-- 2 boinc boinc    590102 Nov 26 10:26 input.tar.gz
[2025-11-26 18:45:14] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:26 start_atlas.sh
[2025-11-26 18:45:14] drwxrwx--x 2 boinc boinc      4096 Nov 26 10:26 shared
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:26 boinc_setup_complete
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc      6440 Nov 26 10:26 init_data.xml
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:26 boinc_lockfile
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc      2784 Nov 26 10:26 pandaJob.out
[2025-11-26 18:45:14] -rw------- 1 boinc boinc    991827 Nov 26 10:26 agis_schedconf.cvmfs.json
[2025-11-26 18:45:14] drwx------ 5 boinc boinc      4096 Nov 26 10:26 pilot3
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc       531 Nov 26 18:40 boinc_task_state.xml
[2025-11-26 18:45:14] -rw------- 1 boinc boinc 921117240 Nov 26 18:43 HITS.47556137._000144.pool.root.1
[2025-11-26 18:45:14] -rw------- 1 boinc boinc      1027 Nov 26 18:44 memory_monitor_summary.json
[2025-11-26 18:45:14] -rw------- 1 boinc boinc        95 Nov 26 18:44 pilot_heartbeat.json
[2025-11-26 18:45:14] -rw------- 1 boinc boinc   1516240 Nov 26 18:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:45:14] -rw------- 1 boinc boinc   1183161 Nov 26 18:44 log.47556137._000144.job.log.tgz.1
[2025-11-26 18:45:14] -rw------- 1 boinc boinc      8574 Nov 26 18:44 heartbeat.json
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc      8192 Nov 26 18:44 boinc_mmap_file
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc        28 Nov 26 18:44 wrapper_checkpoint.txt
[2025-11-26 18:45:14] -rw------- 1 boinc boinc      4752 Nov 26 18:45 pilotlog.txt
[2025-11-26 18:45:14] -rw------- 1 boinc boinc   4197702 Nov 26 18:45 log.47556137._000144.job.log.1
[2025-11-26 18:45:14] -rw------- 1 boinc boinc       353 Nov 26 18:45 output.list
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc       620 Nov 26 18:45 runtime_log
[2025-11-26 18:45:14] -rw------- 1 boinc boinc   5396480 Nov 26 18:45 result.tar.gz
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc      8898 Nov 26 18:45 runtime_log.err
[2025-11-26 18:45:14] -rw------- 1 boinc boinc       665 Nov 26 18:45 TT4NDmD1gg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWeHKDmkMvqin.diag
[2025-11-26 18:45:14] -rw-r--r-- 1 boinc boinc      7861 Nov 26 18:45 stderr.txt
[2025-11-26 18:45:14] HITS file was successfully produced:
[2025-11-26 18:45:14] -rw------- 1 boinc boinc 921117240 Nov 26 18:43 shared/HITS.pool.root.1
[2025-11-26 18:45:14]  *** Contents of shared directory: ***
[2025-11-26 18:45:14] total 1306420
[2025-11-26 18:45:14] -rw-r--r-- 2 boinc boinc 410639819 Nov 26 10:26 ATLAS.root_0
[2025-11-26 18:45:14] -rw-r--r-- 2 boinc boinc    590102 Nov 26 10:26 input.tar.gz
[2025-11-26 18:45:14] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:26 start_atlas.sh
[2025-11-26 18:45:14] -rw------- 1 boinc boinc 921117240 Nov 26 18:43 HITS.pool.root.1
[2025-11-26 18:45:14] -rw------- 1 boinc boinc   5396480 Nov 26 18:45 result.tar.gz
18:45:15 (1442411): run_atlas exited; CPU time 88182.524865
18:45:15 (1442411): called boinc_finish(0)

</stderr_txt>
]]>

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