Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:10:01 (2352257): wrapper (7.7.26015): starting
06:10:01 (2352257): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 06:10:01] Arguments: --nthreads 4
[2025-11-26 06:10:01] Threads: 4
[2025-11-26 06:10:01] Checking for CVMFS
[2025-11-26 06:10:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:10:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:10:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:10:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:10:02] 2.9.2.0 826120 10626 88056 153309 0 81 35481384 36864000 0 130560 0 4238543 99.935 542700 7537 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 06:10:02] CVMFS is ok
[2025-11-26 06:10:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:10:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 06:10:02] Further information can be found at the LHC@home message board.
[2025-11-26 06:10:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:10:02] Checking for apptainer binary...
[2025-11-26 06:10:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:10:02] Running /usr/bin/apptainer --version
[2025-11-26 06:10:02] apptainer version 1.4.1-1.1
[2025-11-26 06:10:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:10:02] thA319a
[2025-11-26 06:10:02] apptainer works
[2025-11-26 06:10:02] Set ATHENA_PROC_NUMBER=4
[2025-11-26 06:10:02] Set ATHENA_CORE_NUMBER=4
[2025-11-26 06:10:02] Starting ATLAS job with PandaID=6895331368
[2025-11-26 06:10:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:58:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:58:46] 2025-11-26 11:57:59,600 | INFO     | update_server=False
[2025-11-26 12:58:46] 2025-11-26 11:57:59,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:58:46] 2025-11-26 11:57:59,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:58:46] 2025-11-26 11:57:59,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:58:46] 2025-11-26 11:57:59,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:58:46] 2025-11-26 11:57:59,636 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 12:58:46] 2025-11-26 11:57:59,636 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 12:58:46] 2025-11-26 11:57:59,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:58:46] 2025-11-26 11:57:59,636 | INFO     | will abort loop
[2025-11-26 12:58:46] 2025-11-26 11:57:59,745 | INFO     | all job control threads have been joined
[2025-11-26 12:58:46] 2025-11-26 11:58:00,166 | INFO     | all data control threads have been joined
[2025-11-26 12:58:46] 2025-11-26 11:58:00,606 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:00,606 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:00,642 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:00,653 | INFO     | all payload control threads have been joined
[2025-11-26 12:58:46] 2025-11-26 11:58:00,751 | INFO     | [job] control thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,127 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,168 | INFO     | [job] validate thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,172 | INFO     | [data] control thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,216 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,375 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,384 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,607 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:01,658 | INFO     | [payload] control thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:02,002 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:02,132 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:03,608 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:10,206 | INFO     | job.realtimelogging is not enabled
[2025-11-26 12:58:46] 2025-11-26 11:58:11,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:58:46] 2025-11-26 11:58:29,473 | INFO     | PID=2356049 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:58:46] 2025-11-26 11:58:29,474 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:58:46] 2025-11-26 11:58:29,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:58:46] 2025-11-26 11:58:29,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:58:46] 2025-11-26 11:58:40,896 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:58:46] 2025-11-26 11:58:41,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357795047232)>', '<ExcThread(monitor, started 140356570048256)>']
[2025-11-26 12:58:46] 2025-11-26 11:58:41,538 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:58:46] 2025-11-26 11:58:41,538 | INFO     | [monitor] control thread has ended
[2025-11-26 12:58:46] 2025-11-26 11:58:46,536 | INFO     | all workflow threads have been joined
[2025-11-26 12:58:46] 2025-11-26 11:58:46,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:58:46] 2025-11-26 11:58:46,537 | INFO     | traces error code: 0
[2025-11-26 12:58:46] 2025-11-26 11:58:46,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:58:46] 2025-11-26 11:58:46,617 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:58:46] 2025-11-26 11:58:46,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:58:46] 2025-11-26 11:58:46,625 [wrapper] pilotpid: 2356049
[2025-11-26 12:58:46] 2025-11-26 11:58:46,629 [wrapper] Pilot exit status: 0
[2025-11-26 12:58:46] 2025-11-26 11:58:46,641 [wrapper] pandaids: 6895331368
[2025-11-26 12:58:46] 2025-11-26 11:58:46,665 [wrapper] cleanup supervisor_pilot 2409643 2356050
[2025-11-26 12:58:46] 2025-11-26 11:58:46,669 [wrapper] Test setup, not cleaning
[2025-11-26 12:58:46] 2025-11-26 11:58:46,673 [wrapper] apfmon messages muted
[2025-11-26 12:58:46] 2025-11-26 11:58:46,677 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:58:46] 2025-11-26 11:58:46,681 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:58:46]  *** Error codes and diagnostics ***
[2025-11-26 12:58:46]     "exeErrorCode": 0,
[2025-11-26 12:58:46]     "exeErrorDiag": "",
[2025-11-26 12:58:46]     "pilotErrorCode": 0,
[2025-11-26 12:58:46]     "pilotErrorDiag": "",
[2025-11-26 12:58:46]  *** Listing of results directory ***
[2025-11-26 12:58:46] total 1314140
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc      5112 Nov 22 00:30 queuedata.json
[2025-11-26 12:58:46] -rwx------ 1 boinc boinc     36292 Nov 22 00:30 runpilot2-wrapper.sh
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc    576529 Nov 22 00:30 pilot3.tar.gz
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc       100 Nov 26 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:58:46] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 06:10 run_atlas
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc       105 Nov 26 06:10 job.xml
[2025-11-26 12:58:46] -rw-r--r-- 2 boinc boinc 409620463 Nov 26 06:10 EVNT.47483658._000171.pool.root.1
[2025-11-26 12:58:46] -rw-r--r-- 2 boinc boinc    590096 Nov 26 06:10 input.tar.gz
[2025-11-26 12:58:46] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:10 start_atlas.sh
[2025-11-26 12:58:46] drwxrwx--x 2 boinc boinc      4096 Nov 26 06:10 shared
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc         0 Nov 26 06:10 boinc_setup_complete
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc      6368 Nov 26 06:10 init_data.xml
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc         0 Nov 26 06:10 boinc_lockfile
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc      2785 Nov 26 06:10 pandaJob.out
[2025-11-26 12:58:46] -rw------- 1 boinc boinc    991877 Nov 26 06:10 agis_schedconf.cvmfs.json
[2025-11-26 12:58:46] drwx------ 5 boinc boinc      4096 Nov 26 06:10 pilot3
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc       532 Nov 26 12:54 boinc_task_state.xml
[2025-11-26 12:58:46] -rw------- 1 boinc boinc 922741796 Nov 26 12:57 HITS.47556137._001705.pool.root.1
[2025-11-26 12:58:46] -rw------- 1 boinc boinc      1027 Nov 26 12:57 memory_monitor_summary.json
[2025-11-26 12:58:46] -rw------- 1 boinc boinc   1516240 Nov 26 12:57 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:58:46] -rw------- 1 boinc boinc   1255355 Nov 26 12:57 log.47556137._001705.job.log.tgz.1
[2025-11-26 12:58:46] -rw------- 1 boinc boinc      8573 Nov 26 12:57 heartbeat.json
[2025-11-26 12:58:46] -rw------- 1 boinc boinc        95 Nov 26 12:58 pilot_heartbeat.json
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc        28 Nov 26 12:58 wrapper_checkpoint.txt
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc      8192 Nov 26 12:58 boinc_mmap_file
[2025-11-26 12:58:46] -rw------- 1 boinc boinc      5010 Nov 26 12:58 pilotlog.txt
[2025-11-26 12:58:46] -rw------- 1 boinc boinc   3452232 Nov 26 12:58 log.47556137._001705.job.log.1
[2025-11-26 12:58:46] -rw------- 1 boinc boinc       353 Nov 26 12:58 output.list
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc       620 Nov 26 12:58 runtime_log
[2025-11-26 12:58:46] -rw------- 1 boinc boinc   4730880 Nov 26 12:58 result.tar.gz
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc      8903 Nov 26 12:58 runtime_log.err
[2025-11-26 12:58:46] -rw------- 1 boinc boinc       666 Nov 26 12:58 Dk4LDmglpg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8qHKDmb0Fm9n.diag
[2025-11-26 12:58:46] -rw-r--r-- 1 boinc boinc      7740 Nov 26 12:58 stderr.txt
[2025-11-26 12:58:46] HITS file was successfully produced:
[2025-11-26 12:58:46] -rw------- 1 boinc boinc 922741796 Nov 26 12:57 shared/HITS.pool.root.1
[2025-11-26 12:58:46]  *** Contents of shared directory: ***
[2025-11-26 12:58:46] total 1306360
[2025-11-26 12:58:46] -rw-r--r-- 2 boinc boinc 409620463 Nov 26 06:10 ATLAS.root_0
[2025-11-26 12:58:46] -rw-r--r-- 2 boinc boinc    590096 Nov 26 06:10 input.tar.gz
[2025-11-26 12:58:46] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:10 start_atlas.sh
[2025-11-26 12:58:46] -rw------- 1 boinc boinc 922741796 Nov 26 12:57 HITS.pool.root.1
[2025-11-26 12:58:46] -rw------- 1 boinc boinc   4730880 Nov 26 12:58 result.tar.gz
12:58:47 (2352257): run_atlas exited; CPU time 95759.831127
12:58:47 (2352257): called boinc_finish(0)

</stderr_txt>
]]>

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