Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:52:30 (461271): wrapper (7.7.26015): starting
10:52:30 (461271): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 10:52:30] Arguments: --nthreads 3
[2025-11-27 10:52:30] Threads: 3
[2025-11-27 10:52:30] Checking for CVMFS
[2025-11-27 10:52:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 10:52:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 10:52:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 10:52:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 10:52:30] 2.9.2.0 295306 1176 71180 153358 2 57 29466171 36864001 0 130560 0 447714 99.982 46105 780 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 10:52:30] CVMFS is ok
[2025-11-27 10:52:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 10:52:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 10:52:30] Further information can be found at the LHC@home message board.
[2025-11-27 10:52:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 10:52:30] Checking for apptainer binary...
[2025-11-27 10:52:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 10:52:30] Running /usr/bin/apptainer --version
[2025-11-27 10:52:30] apptainer version 1.4.1-1.1
[2025-11-27 10:52:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 10:52:31] atlasA091
[2025-11-27 10:52:31] apptainer works
[2025-11-27 10:52:31] Set ATHENA_PROC_NUMBER=3
[2025-11-27 10:52:31] Set ATHENA_CORE_NUMBER=3
[2025-11-27 10:52:31] Starting ATLAS job with PandaID=6894264780
[2025-11-27 10:52:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:57:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:57:15] 2025-11-27 17:56:32,269 | INFO     | time since job start (29036s) is within the limit (172800.0s)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,330 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:57:15] 2025-11-27 17:56:32,331 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3722.2450000000003
[2025-11-27 18:57:15] 2025-11-27 17:56:32,332 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894264780/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,333 | INFO     | extracted standard info from prmon json
[2025-11-27 18:57:15] 2025-11-27 17:56:32,333 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:57:15] 2025-11-27 17:56:32,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:57:15] 2025-11-27 17:56:32,336 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:57:15] 2025-11-27 17:56:32,336 | INFO     | sum of square deviations: 33442394475.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,338 | INFO     | sum of deviations: 221164018222.99997
[2025-11-27 18:57:15] 2025-11-27 17:56:32,338 | INFO     | mean x: 1764251664.5
[2025-11-27 18:57:15] 2025-11-27 17:56:32,338 | INFO     | mean y: 2207372.43697479
[2025-11-27 18:57:15] 2025-11-27 17:56:32,338 | INFO     | intersect: -11665288134.47487
[2025-11-27 18:57:15] 2025-11-27 17:56:32,338 | INFO     | chi2: 3.2451169976831227
[2025-11-27 18:57:15] 2025-11-27 17:56:32,338 | INFO     | sum of square deviations: 32399565620.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,340 | INFO     | sum of deviations: 264806366780.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,340 | INFO     | mean x: 1764251512.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,340 | INFO     | mean y: 2213717.7664543525
[2025-11-27 18:57:15] 2025-11-27 17:56:32,340 | INFO     | intersect: -14417270742.557663
[2025-11-27 18:57:15] 2025-11-27 17:56:32,341 | INFO     | chi2: 2.404970088866654
[2025-11-27 18:57:15] 2025-11-27 17:56:32,341 | INFO     | current chi2=2.404970088866654 (change=25.889572222397472 %)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,341 | INFO     | sum of square deviations: 31378644152.5
[2025-11-27 18:57:15] 2025-11-27 17:56:32,342 | INFO     | sum of deviations: 261581959697.5
[2025-11-27 18:57:15] 2025-11-27 17:56:32,343 | INFO     | mean x: 1764251359.5
[2025-11-27 18:57:15] 2025-11-27 17:56:32,343 | INFO     | mean y: 2213236.1223175963
[2025-11-27 18:57:15] 2025-11-27 17:56:32,343 | INFO     | intersect: -14705124843.054066
[2025-11-27 18:57:15] 2025-11-27 17:56:32,343 | INFO     | chi2: 2.4023348715737365
[2025-11-27 18:57:15] 2025-11-27 17:56:32,343 | INFO     | current chi2=2.4023348715737365 (change=0.10957380738815976 %)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,343 | INFO     | right removable region: 465
[2025-11-27 18:57:15] 2025-11-27 17:56:32,343 | INFO     | sum of square deviations: 32399565620.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,345 | INFO     | sum of deviations: 121663713221.99998
[2025-11-27 18:57:15] 2025-11-27 17:56:32,345 | INFO     | mean x: 1764251817.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,345 | INFO     | mean y: 2221901.093418259
[2025-11-27 18:57:15] 2025-11-27 17:56:32,345 | INFO     | intersect: -6622725779.7601
[2025-11-27 18:57:15] 2025-11-27 17:56:32,345 | INFO     | chi2: 1.1615009242659606
[2025-11-27 18:57:15] 2025-11-27 17:56:32,345 | INFO     | current chi2=1.1615009242659606 (change=64.20773349326933 %)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,345 | INFO     | sum of square deviations: 31378644152.5
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | sum of deviations: 95918678075.5
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | mean x: 1764251969.5
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | mean y: 2225728.856223176
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | intersect: -5390764353.318977
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | chi2: 0.9326754340935759
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | current chi2=0.9326754340935759 (change=19.70084443256011 %)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | left removable region: 20
[2025-11-27 18:57:15] 2025-11-27 17:56:32,347 | INFO     | sum of square deviations: 27324754190.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,349 | INFO     | sum of deviations: 122905647235.99998
[2025-11-27 18:57:15] 2025-11-27 17:56:32,349 | INFO     | mean x: 1764251939.0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,349 | INFO     | mean y: 2234458.5707865166
[2025-11-27 18:57:15] 2025-11-27 17:56:32,349 | INFO     | intersect: -7933299926.932242
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | chi2: 0.08257921019813842
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | current memory leak: 4.50 B/s (using 445 data points, chi2=0.08)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | could have reported an average CPU frequency of 3976 MHz (20 samples)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | ..............................
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . Timing measurements:
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . get job = 0 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . initial setup = 1 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . payload setup = 3 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . stage-in = 0 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . payload execution = 29009 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . stage-out = 1 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | . log creation = 0 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,350 | INFO     | ..............................
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | 
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | job summary report
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | --------------------------------------------------
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | PanDA job id: 6894264780
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | task id: 47533967
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | errors: (none)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | pilot state: finished 
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | transexitcode: 0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | exeerrorcode: 0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | exeerrordiag: 
[2025-11-27 18:57:15] 2025-11-27 17:56:32,396 | INFO     | exitcode: 0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | exitmsg: OK
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | cpuconsumptiontime: 85759 s
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | nevents: 1000
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | neventsw: 0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | pid: 471438
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | pgrp: 471438
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | corecount: 3
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | event service: False
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | sizes: {0: 2284318, 3: 2284580, 11: 2284608, 29016: 2323596, 29017: 2323595, 29019: 2332835, 29023: 2333025}
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | --------------------------------------------------
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | 
[2025-11-27 18:57:15] 2025-11-27 17:56:32,397 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 18:57:15] 2025-11-27 17:56:32,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | job 6894264780 has completed (purged errors)
[2025-11-27 18:57:15] 2025-11-27 17:56:32,413 | INFO     | overall cleanup function is called
[2025-11-27 18:57:15] 2025-11-27 17:56:33,422 | INFO     | --- collectZombieJob: --- 10, [471438]
[2025-11-27 18:57:15] 2025-11-27 17:56:33,422 | INFO     | zombie collector waiting for pid 471438
[2025-11-27 18:57:15] 2025-11-27 17:56:33,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:57:15] 2025-11-27 17:56:33,422 | INFO     | collected zombie processes
[2025-11-27 18:57:15] 2025-11-27 17:56:33,422 | INFO     | will attempt to kill all subprocesses of pid=471438
[2025-11-27 18:57:15] 2025-11-27 17:56:33,464 | INFO     | process IDs to be killed: [471438] (in reverse order)
[2025-11-27 18:57:15] 2025-11-27 17:56:33,490 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:57:15] 2025-11-27 17:56:33,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:57:15] 2025-11-27 17:56:33,491 | INFO     | did not find any defunct processes belonging to 471438
[2025-11-27 18:57:15] 2025-11-27 17:56:33,492 | INFO     | did not find any defunct processes belonging to 471438
[2025-11-27 18:57:15] 2025-11-27 17:56:33,493 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:57:15] 2025-11-27 17:56:33,493 | INFO     | ready for new job
[2025-11-27 18:57:15] 2025-11-27 17:56:33,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:57:15] 2025-11-27 17:56:33,494 | INFO     | ***************************************
[2025-11-27 18:57:15] 2025-11-27 17:56:33,494 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:57:15] 2025-11-27 17:56:33,494 | INFO     | ***************************************
[2025-11-27 18:57:15] 2025-11-27 17:56:33,494 | INFO     | 
[2025-11-27 18:57:15] 2025-11-27 17:56:33,494 | INFO     | architecture information:
[2025-11-27 18:57:15] 2025-11-27 17:56:33,495 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:57:15] 2025-11-27 17:56:33,504 | INFO     | cat /etc/os-release:
[2025-11-27 18:57:15] NAME="CentOS Linux"
[2025-11-27 18:57:15] VERSION="7 (Core)"
[2025-11-27 18:57:15] ID="centos"
[2025-11-27 18:57:15] ID_LIKE="rhel fedora"
[2025-11-27 18:57:15] VERSION_ID="7"
[2025-11-27 18:57:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:57:15] ANSI_COLOR="0;31"
[2025-11-27 18:57:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:57:15] HOME_URL="https://www.centos.org/"
[2025-11-27 18:57:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:57:15] 
[2025-11-27 18:57:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:57:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:57:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:57:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:57:15] 
[2025-11-27 18:57:15] 2025-11-27 17:56:33,504 | INFO     | ***************************************
[2025-11-27 18:57:15] 2025-11-27 17:56:34,007 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | INFO     | sufficient remaining disk space (371218972672 B)
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | INFO     | update_server=False
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:57:15] 2025-11-27 17:56:34,021 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 18:57:15] 2025-11-27 17:56:34,022 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:57:15] 2025-11-27 17:56:34,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:57:15] 2025-11-27 17:56:34,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:57:15] 2025-11-27 17:56:34,149 | INFO     | all payload control threads have been joined
[2025-11-27 18:57:15] 2025-11-27 17:56:34,184 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 18:57:15] 2025-11-27 17:56:34,184 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 18:57:15] 2025-11-27 17:56:34,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:57:15] 2025-11-27 17:56:34,184 | INFO     | will abort loop
[2025-11-27 18:57:15] 2025-11-27 17:56:34,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:57:15] 2025-11-27 17:56:34,961 | INFO     | all data control threads have been joined
[2025-11-27 18:57:15] 2025-11-27 17:56:35,025 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,026 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,119 | INFO     | all job control threads have been joined
[2025-11-27 18:57:15] 2025-11-27 17:56:35,155 | INFO     | [payload] control thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,190 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,221 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,405 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,547 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,830 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:35,965 | INFO     | [data] control thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:36,027 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:36,031 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:36,125 | INFO     | [job] control thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:36,277 | INFO     | [job] validate thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:36,305 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:38,369 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:56:44,333 | INFO     | job.realtimelogging is not enabled
[2025-11-27 18:57:15] 2025-11-27 17:56:45,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:57:15] 2025-11-27 17:57:09,677 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:57:15] 2025-11-27 17:57:10,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713140590400)>', '<ExcThread(monitor, started 140712490284800)>']
[2025-11-27 18:57:15] 2025-11-27 17:57:11,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:57:15] 2025-11-27 17:57:11,219 | INFO     | [monitor] control thread has ended
[2025-11-27 18:57:15] 2025-11-27 17:57:15,727 | INFO     | all workflow threads have been joined
[2025-11-27 18:57:15] 2025-11-27 17:57:15,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:57:15] 2025-11-27 17:57:15,728 | INFO     | traces error code: 0
[2025-11-27 18:57:15] 2025-11-27 17:57:15,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:57:15] 2025-11-27 17:57:15,779 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:57:15] 2025-11-27 17:57:15,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:57:15] 2025-11-27 17:57:15,784 [wrapper] pilotpid: 464990
[2025-11-27 18:57:15] 2025-11-27 17:57:15,787 [wrapper] Pilot exit status: 0
[2025-11-27 18:57:15] 2025-11-27 17:57:15,795 [wrapper] pandaids: 6894264780
[2025-11-27 18:57:15] 2025-11-27 17:57:15,812 [wrapper] cleanup supervisor_pilot  521806 464991
[2025-11-27 18:57:15] 2025-11-27 17:57:15,815 [wrapper] Test setup, not cleaning
[2025-11-27 18:57:15] 2025-11-27 17:57:15,817 [wrapper] apfmon messages muted
[2025-11-27 18:57:15] 2025-11-27 17:57:15,820 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:57:15] 2025-11-27 17:57:15,822 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:57:15]  *** Error codes and diagnostics ***
[2025-11-27 18:57:15]     "exeErrorCode": 0,
[2025-11-27 18:57:15]     "exeErrorDiag": "",
[2025-11-27 18:57:15]     "pilotErrorCode": 0,
[2025-11-27 18:57:15]     "pilotErrorDiag": "",
[2025-11-27 18:57:15]  *** Listing of results directory ***
[2025-11-27 18:57:15] total 1313216
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc    576529 Nov 21 05:12 pilot3.tar.gz
[2025-11-27 18:57:15] -rwx------ 1 boinc boinc     36292 Nov 21 05:52 runpilot2-wrapper.sh
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:52 queuedata.json
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc       100 Nov 27 10:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:57:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 10:52 run_atlas
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc       105 Nov 27 10:52 job.xml
[2025-11-27 18:57:15] -rw-r--r-- 2 boinc boinc 409524819 Nov 27 10:52 EVNT.47493127._002201.pool.root.1
[2025-11-27 18:57:15] -rw-r--r-- 2 boinc boinc    590104 Nov 27 10:52 input.tar.gz
[2025-11-27 18:57:15] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:52 start_atlas.sh
[2025-11-27 18:57:15] drwxrwx--x 2 boinc boinc      4096 Nov 27 10:52 shared
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc         0 Nov 27 10:52 boinc_setup_complete
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc      6444 Nov 27 10:52 init_data.xml
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc         0 Nov 27 10:52 boinc_lockfile
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc      2786 Nov 27 10:52 pandaJob.out
[2025-11-27 18:57:15] -rw------- 1 boinc boinc    991551 Nov 27 10:52 agis_schedconf.cvmfs.json
[2025-11-27 18:57:15] drwx------ 5 boinc boinc      4096 Nov 27 10:52 pilot3
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc       531 Nov 27 18:53 boinc_task_state.xml
[2025-11-27 18:57:15] -rw------- 1 boinc boinc        95 Nov 27 18:55 pilot_heartbeat.json
[2025-11-27 18:57:15] -rw------- 1 boinc boinc 920783625 Nov 27 18:56 HITS.47533967._001730.pool.root.1
[2025-11-27 18:57:15] -rw------- 1 boinc boinc      1022 Nov 27 18:56 memory_monitor_summary.json
[2025-11-27 18:57:15] -rw------- 1 boinc boinc   1516240 Nov 27 18:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:57:15] -rw------- 1 boinc boinc   1166691 Nov 27 18:56 log.47533967._001730.job.log.tgz.1
[2025-11-27 18:57:15] -rw------- 1 boinc boinc      8566 Nov 27 18:56 heartbeat.json
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc      8192 Nov 27 18:56 boinc_mmap_file
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc        28 Nov 27 18:56 wrapper_checkpoint.txt
[2025-11-27 18:57:15] -rw------- 1 boinc boinc      4814 Nov 27 18:57 pilotlog.txt
[2025-11-27 18:57:15] -rw------- 1 boinc boinc   4085017 Nov 27 18:57 log.47533967._001730.job.log.1
[2025-11-27 18:57:15] -rw------- 1 boinc boinc       353 Nov 27 18:57 output.list
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc       620 Nov 27 18:57 runtime_log
[2025-11-27 18:57:15] -rw------- 1 boinc boinc   5273600 Nov 27 18:57 result.tar.gz
[2025-11-27 18:57:15] -rw------- 1 boinc boinc       668 Nov 27 18:57 vbWLDmdJYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm02IKDmRLiGhm.diag
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc      8913 Nov 27 18:57 runtime_log.err
[2025-11-27 18:57:15] -rw-r--r-- 1 boinc boinc     21112 Nov 27 18:57 stderr.txt
[2025-11-27 18:57:15] HITS file was successfully produced:
[2025-11-27 18:57:15] -rw------- 1 boinc boinc 920783625 Nov 27 18:56 shared/HITS.pool.root.1
[2025-11-27 18:57:15]  *** Contents of shared directory: ***
[2025-11-27 18:57:15] total 1304888
[2025-11-27 18:57:15] -rw-r--r-- 2 boinc boinc 409524819 Nov 27 10:52 ATLAS.root_0
[2025-11-27 18:57:15] -rw-r--r-- 2 boinc boinc    590104 Nov 27 10:52 input.tar.gz
[2025-11-27 18:57:15] -rw-r--r-- 2 boinc boinc     15847 Nov 27 10:52 start_atlas.sh
[2025-11-27 18:57:15] -rw------- 1 boinc boinc 920783625 Nov 27 18:56 HITS.pool.root.1
[2025-11-27 18:57:15] -rw------- 1 boinc boinc   5273600 Nov 27 18:57 result.tar.gz
18:57:17 (461271): run_atlas exited; CPU time 85786.280094
18:57:17 (461271): called boinc_finish(0)

</stderr_txt>
]]>

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