Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-24 10:43:14 (26280): vboxwrapper version 26210
2025-11-24 10:43:14 (26280): BOINC client version: 7.16.11
2025-11-24 10:43:15 (26280): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-11-24 10:43:15 (26280): Successfully copied 'init_data.xml' to the shared directory.
2025-11-24 10:43:15 (26280): Create VM. (boinc_0d87a538c85d9990, slot#2)
2025-11-24 10:43:16 (26280): Setting Memory Size for VM. (4400MB)
2025-11-24 10:43:16 (26280): Setting CPU Count for VM. (4)
2025-11-24 10:43:16 (26280): Setting Chipset Options for VM.
2025-11-24 10:43:16 (26280): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-24 10:43:17 (26280): Setting Boot Options for VM.
2025-11-24 10:43:17 (26280): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-24 10:43:17 (26280): Enabling VM Network Access.
2025-11-24 10:43:18 (26280): Disabling USB Support for VM.
2025-11-24 10:43:18 (26280): Disabling COM Port Support for VM.
2025-11-24 10:43:18 (26280): Disabling LPT Port Support for VM.
2025-11-24 10:43:19 (26280): Disabling Audio Support for VM.
2025-11-24 10:43:19 (26280): Disabling Clipboard Support for VM.
2025-11-24 10:43:19 (26280): Disabling Drag and Drop Support for VM.
2025-11-24 10:43:19 (26280): Adding storage controller(s) to VM.
2025-11-24 10:43:20 (26280): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-24 10:43:20 (26280): Adding VirtualBox Guest Additions to VM.
2025-11-24 10:43:20 (26280): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-24 10:43:21 (26280): forwarding host port 63379 to guest port 80
2025-11-24 10:43:21 (26280): Enabling remote desktop for VM.
2025-11-24 10:43:21 (26280): Required extension pack not installed, remote desktop not enabled.
2025-11-24 10:43:21 (26280): Enabling shared directory for VM.
2025-11-24 10:43:22 (26280): Starting VM using VBoxManage interface. (boinc_0d87a538c85d9990, slot#2)
2025-11-24 10:43:26 (26280): Successfully started VM. (PID = '22960')
2025-11-24 10:43:26 (26280): Reporting VM Process ID to BOINC.
2025-11-24 10:43:26 (26280): Guest Log: BIOS: VirtualBox 6.1.12
2025-11-24 10:43:26 (26280): Guest Log: CPUID EDX: 0x178bfbff
2025-11-24 10:43:26 (26280): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-24 10:43:26 (26280): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-24 10:43:26 (26280): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-24 10:43:26 (26280): Detected: Web Application Enabled (http://localhost:63379)
2025-11-24 10:43:26 (26280): Preference change detected
2025-11-24 10:43:26 (26280): Setting CPU throttle for VM. (100%)
2025-11-24 10:43:26 (26280): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-24 10:43:28 (26280): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-24 10:43:28 (26280): Guest Log: BIOS: Booting from Hard Disk...
2025-11-24 10:43:31 (26280): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-24 10:43:31 (26280): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-24 10:43:31 (26280): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-24 10:43:40 (26280): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-24 10:43:40 (26280): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-24 10:43:52 (26280): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.000155 main     Log opened 2025-11-24T10:43:50.647931000Z
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.000244 main     OS Product: Linux
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.000277 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.000304 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.000331 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.000332 main     Process ID: 1304
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.000333 main     Package type: LINUX_64BITS_GENERIC
2025-11-24 10:43:52 (26280): Guest Log: 00:00:00.002216 main     5.2.32 r132073 started. Verbose level = 0
2025-11-24 10:43:52 (26280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-24 10:43:52 (26280): Guest Log: [INFO] Mounting shared directory
2025-11-24 10:43:52 (26280): Guest Log: [INFO] Checking for init_data.xml
2025-11-24 10:43:58 (26280): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-24 10:43:58 (26280): Guest Log: [INFO] Detected branch: prod
2025-11-24 10:43:59 (26280): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-24 10:43:59 (26280): Guest Log: Copying input files
2025-11-24 10:44:02 (26280): Guest Log: 00:00:10.199143 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 115 586 000ns (GuestNow=1 764 006 241 769 224 000 ns GuestLast=1 763 981 030 653 638 000 ns fSetTimeLastLoop=true )
2025-11-24 10:44:05 (26280): Guest Log: Copied input files into RunAtlas.
2025-11-24 10:44:05 (26280): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-24 10:44:05 (26280): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-24 10:44:05 (26280): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-24 10:44:05 (26280): Guest Log: Further information can be found at the LHC@home message board.
2025-11-24 10:44:15 (26280): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-24 10:44:15 (26280): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-24 10:44:15 (26280): Guest Log: 2.6.3.0 1585 0 32184 153254 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-24 10:44:16 (26280): Guest Log: copied the webapp to /var/www
2025-11-24 10:44:16 (26280): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-24 10:44:16 (26280): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-24 10:44:16 (26280): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-24 10:44:16 (26280): Guest Log:  *** Starting ATLAS job. (PandaID=6894241931 taskID=47533967) ***
2025-11-24 12:30:23 (26280): Status Report: Elapsed Time: '6002.775982'
2025-11-24 12:30:23 (26280): Status Report: CPU Time: '23586.843750'
2025-11-24 14:13:58 (26280): Status Report: Elapsed Time: '12003.600756'
2025-11-24 14:13:58 (26280): Status Report: CPU Time: '48041.531250'
2025-11-24 15:57:13 (26280): Status Report: Elapsed Time: '18004.134796'
2025-11-24 15:57:13 (26280): Status Report: CPU Time: '72463.953125'
2025-11-24 17:40:54 (26280): Status Report: Elapsed Time: '24004.585861'
2025-11-24 17:40:54 (26280): Status Report: CPU Time: '97001.062500'
2025-11-24 19:23:59 (26280): Status Report: Elapsed Time: '30005.109642'
2025-11-24 19:23:59 (26280): Status Report: CPU Time: '121372.609375'
2025-11-24 21:07:27 (26280): Status Report: Elapsed Time: '36006.009621'
2025-11-24 21:07:27 (26280): Status Report: CPU Time: '145772.546875'
2025-11-24 22:50:46 (26280): Status Report: Elapsed Time: '42006.768871'
2025-11-24 22:50:46 (26280): Status Report: CPU Time: '169529.140625'
2025-11-25 00:34:18 (26280): Status Report: Elapsed Time: '48007.750546'
2025-11-25 00:34:18 (26280): Status Report: CPU Time: '194047.015625'
2025-11-25 02:18:25 (26280): Status Report: Elapsed Time: '54014.536959'
2025-11-25 02:18:25 (26280): Status Report: CPU Time: '218729.296875'
2025-11-25 04:01:56 (26280): Status Report: Elapsed Time: '60014.637909'
2025-11-25 04:01:56 (26280): Status Report: CPU Time: '243204.250000'
2025-11-25 05:45:07 (26280): Status Report: Elapsed Time: '66014.933422'
2025-11-25 05:45:07 (26280): Status Report: CPU Time: '267600.109375'
2025-11-25 06:53:39 (26280): Guest Log:  *** Job finished ***
2025-11-25 06:53:39 (26280): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:35,679 | INFO     | PID=5983 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:35,679 | INFO     | found 0 job(s) in 20 queues
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:35,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:35,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:35,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:35,680 | INFO     | [monitor] control thread has ended
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,274 | INFO     | all workflow threads have been joined
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,274 | INFO     | end of generic workflow (traces error code: 0)
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,274 | INFO     | traces error code: 0
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,381 [wrapper] ==== pilot stdout END ====
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,388 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,393 [wrapper] pilotpid: 5983
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,399 [wrapper] Pilot exit status: 0
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,419 [wrapper] pandaids: 6894241931
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,456 [wrapper] cleanup supervisor_pilot  8865 5984
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,464 [wrapper] Test setup, not cleaning
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,471 [wrapper] apfmon messages muted
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,477 [wrapper] ==== wrapper stdout END ====
2025-11-25 06:53:39 (26280): Guest Log: 2025-11-25 13:53:36,483 [wrapper] ==== wrapper stderr END ====
2025-11-25 06:53:39 (26280): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 06:53:39 (26280): Guest Log:     "exeErrorCode": 0,
2025-11-25 06:53:39 (26280): Guest Log:     "exeErrorDiag": "",
2025-11-25 06:53:39 (26280): Guest Log:     "pilotErrorCode": 0,
2025-11-25 06:53:39 (26280): Guest Log:     "pilotErrorDiag": "",
2025-11-25 06:53:39 (26280): Guest Log:  *** Listing of results directory ***
2025-11-25 06:53:39 (26280): Guest Log: total 919888
2025-11-25 06:53:39 (26280): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 00:06 pilot3.tar.gz
2025-11-25 06:53:39 (26280): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 00:47 queuedata.json
2025-11-25 06:53:39 (26280): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 00:47 runpilot2-wrapper.sh
2025-11-25 06:53:39 (26280): Guest Log: -rwxr-xr-x. 1 atlas atlas     12101 Nov 24 17:44 init_data.xml
2025-11-25 06:53:39 (26280): Guest Log: -rwxr-xr-x. 1 atlas atlas    590102 Nov 24 17:44 input.tar.gz
2025-11-25 06:53:39 (26280): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 24 17:44 start_atlas.sh
2025-11-25 06:53:39 (26280): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 24 17:44 EVNT.47493127._002059.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 06:53:39 (26280): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 24 17:44 pandaJob.out
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas    991801 Nov 24 17:45 agis_schedconf.cvmfs.json
2025-11-25 06:53:39 (26280): Guest Log: drwx------. 5 atlas atlas      4096 Nov 24 17:45 pilot3
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas 915382190 Nov 25 13:52 HITS.47533967._000306.pool.root.1
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas      1039 Nov 25 13:52 memory_monitor_summary.json
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 25 13:52 agis_ddmendpoints.agis.ALL.json
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas   1834498 Nov 25 13:52 log.47533967._000306.job.log.tgz.1
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas      8658 Nov 25 13:53 heartbeat.json
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas        95 Nov 25 13:53 pilot_heartbeat.json
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 25 13:53 pilotlog.txt
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas   9534321 Nov 25 13:53 log.47533967._000306.job.log.1
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas       353 Nov 25 13:53 output.list
2025-11-25 06:53:39 (26280): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 25 13:53 runtime_log
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas  11386880 Nov 25 13:53 result.tar.gz
2025-11-25 06:53:39 (26280): Guest Log: -rw-r--r--. 1 atlas atlas      8789 Nov 25 13:53 runtime_log.err
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas       677 Nov 25 13:53 3XYMDm9TUg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPlIKDmzT5Agn.diag
2025-11-25 06:53:39 (26280): Guest Log: Looking for outputfile HITS.47533967._000306.pool.root.1
2025-11-25 06:53:39 (26280): Guest Log: HITS file was successfully produced
2025-11-25 06:53:39 (26280): Guest Log: -rw-------. 1 atlas atlas 915382190 Nov 25 13:52 /home/atlas/RunAtlas/HITS.47533967._000306.pool.root.1
2025-11-25 06:53:43 (26280): Guest Log: Successfully finished the ATLAS job!
2025-11-25 06:53:43 (26280): Guest Log: Copying the results back to the shared directory!
2025-11-25 06:53:43 (26280): Guest Log:  *** Contents of shared directory: ***
2025-11-25 06:53:43 (26280): Guest Log: total 1304964
2025-11-25 06:53:43 (26280): Guest Log: -rwxrwxrwx. 1 root root 408890712 Nov 24 17:43 ATLAS.root_0
2025-11-25 06:53:43 (26280): Guest Log: -rwxrwxrwx. 1 root root 915382190 Nov 25 13:53 HITS.pool.root.1
2025-11-25 06:53:43 (26280): Guest Log: -rwxrwxrwx. 1 root root     12101 Nov 24 17:43 init_data.xml
2025-11-25 06:53:43 (26280): Guest Log: -rwxrwxrwx. 1 root root    590102 Nov 23 08:46 input.tar.gz
2025-11-25 06:53:43 (26280): Guest Log: -rwxrwxrwx. 1 root root  11386880 Nov 25 13:53 result.tar.gz
2025-11-25 06:53:43 (26280): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 23 08:46 start_atlas.sh
2025-11-25 06:53:43 (26280): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 06:53:43 (26280): VM Completion File Detected.
2025-11-25 06:53:43 (26280): Powering off VM.
2025-11-25 06:53:43 (26280): Successfully stopped VM.
2025-11-25 06:53:43 (26280): Deregistering VM. (boinc_0d87a538c85d9990, slot#2)
2025-11-25 06:53:43 (26280): Removing network bandwidth throttle group from VM.
2025-11-25 06:53:44 (26280): Removing VM from VirtualBox.
2025-11-25 06:53:49 (26280): called boinc_finish(0)

</stderr_txt>
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