Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:15:44 (15652): wrapper (7.7.26015): starting
15:15:44 (15652): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:15:44] Arguments: --nthreads 8
[2025-11-25 15:15:44] Threads: 8
[2025-11-25 15:15:44] Checking for CVMFS
[2025-11-25 15:15:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:15:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:15:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:15:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:15:47] 2.11.2.0 21973 81255 92064 153284 1 85 13426228 25165824 4632 130560 11 25418832 99.888 14228619 1990 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 15:15:47] CVMFS is ok
[2025-11-25 15:15:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:15:47] Checking for apptainer binary...
[2025-11-25 15:15:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:15:47] Running /usr/bin/apptainer --version
[2025-11-25 15:15:47] apptainer version 1.3.2-1.el7
[2025-11-25 15:15:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:16:05] cg-vwn333.simple-grid.lan
[2025-11-25 15:16:05] apptainer works
[2025-11-25 15:16:05] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:16:05] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:16:05] Starting ATLAS job with PandaID=6894052094
[2025-11-25 15:16:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:58:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:58:48] 2025-11-25 23:57:45,818 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 00:58:48] 2025-11-25 23:57:45,820 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6894052094/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:58:48] 2025-11-25 23:57:45,821 | INFO     | extracted standard info from prmon json
[2025-11-26 00:58:48] 2025-11-25 23:57:45,821 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:58:48] 2025-11-25 23:57:45,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:58:48] 2025-11-25 23:57:45,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 00:58:48] 2025-11-25 23:57:45,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 00:58:48] 2025-11-25 23:57:45,833 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:58:48] 2025-11-25 23:57:45,834 | INFO     | sum of square deviations: 54455421020.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,843 | INFO     | sum of deviations: 30962333609.49997
[2025-11-26 00:58:48] 2025-11-25 23:57:45,844 | INFO     | mean x: 1764097854.5
[2025-11-26 00:58:48] 2025-11-25 23:57:45,844 | INFO     | mean y: 2554815.4910714286
[2025-11-26 00:58:48] 2025-11-25 23:57:45,844 | INFO     | intersect: -1000478220.8483497
[2025-11-26 00:58:48] 2025-11-25 23:57:45,845 | INFO     | chi2: 2.7765231563734085
[2025-11-26 00:58:48] 2025-11-25 23:57:45,846 | INFO     | sum of square deviations: 53009775310.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,855 | INFO     | sum of deviations: 68341698736.99999
[2025-11-26 00:58:48] 2025-11-25 23:57:45,855 | INFO     | mean x: 1764097702.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,855 | INFO     | mean y: 2558729.4612612613
[2025-11-26 00:58:48] 2025-11-25 23:57:45,855 | INFO     | intersect: -2271765826.4848332
[2025-11-26 00:58:48] 2025-11-25 23:57:45,856 | INFO     | chi2: 2.0049849042709553
[2025-11-26 00:58:48] 2025-11-25 23:57:45,856 | INFO     | current chi2=2.0049849042709553 (change=27.787927874162154 %)
[2025-11-26 00:58:48] 2025-11-25 23:57:45,857 | INFO     | sum of square deviations: 51589944037.5
[2025-11-26 00:58:48] 2025-11-25 23:57:45,866 | INFO     | sum of deviations: 66981778950.00002
[2025-11-26 00:58:48] 2025-11-25 23:57:45,866 | INFO     | mean x: 1764097549.5
[2025-11-26 00:58:48] 2025-11-25 23:57:45,867 | INFO     | mean y: 2558583.3963636365
[2025-11-26 00:58:48] 2025-11-25 23:57:45,867 | INFO     | intersect: -2287856618.8561363
[2025-11-26 00:58:48] 2025-11-25 23:57:45,867 | INFO     | chi2: 2.0051167786541284
[2025-11-26 00:58:48] 2025-11-25 23:57:45,868 | INFO     | current chi2=2.0051167786541284 (change=-0.006577325489691518 %)
[2025-11-26 00:58:48] 2025-11-25 23:57:45,868 | INFO     | right removable region: 549
[2025-11-26 00:58:48] 2025-11-25 23:57:45,869 | INFO     | sum of square deviations: 53009775310.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,877 | INFO     | sum of deviations: -78010849484.9999
[2025-11-26 00:58:48] 2025-11-25 23:57:45,878 | INFO     | mean x: 1764098007.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,878 | INFO     | mean y: 2566276.5801801803
[2025-11-26 00:58:48] 2025-11-25 23:57:45,878 | INFO     | intersect: 2598668284.1075406
[2025-11-26 00:58:48] 2025-11-25 23:57:45,879 | INFO     | chi2: 1.036883601889481
[2025-11-26 00:58:48] 2025-11-25 23:57:45,879 | INFO     | current chi2=1.036883601889481 (change=62.65532309682518 %)
[2025-11-26 00:58:48] 2025-11-25 23:57:45,880 | INFO     | sum of square deviations: 51589944037.5
[2025-11-26 00:58:48] 2025-11-25 23:57:45,889 | INFO     | sum of deviations: -93969811615.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,889 | INFO     | mean x: 1764098159.5
[2025-11-26 00:58:48] 2025-11-25 23:57:45,889 | INFO     | mean y: 2567987.9745454546
[2025-11-26 00:58:48] 2025-11-25 23:57:45,889 | INFO     | intersect: 3215829308.787104
[2025-11-26 00:58:48] 2025-11-25 23:57:45,890 | INFO     | chi2: 0.9981953783068268
[2025-11-26 00:58:48] 2025-11-25 23:57:45,890 | INFO     | current chi2=0.9981953783068268 (change=3.731202182400586 %)
[2025-11-26 00:58:48] 2025-11-25 23:57:45,891 | INFO     | left removable region: 20
[2025-11-26 00:58:48] 2025-11-25 23:57:45,891 | INFO     | sum of square deviations: 45903297880.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,899 | INFO     | sum of deviations: -34926323968.00007
[2025-11-26 00:58:48] 2025-11-25 23:57:45,900 | INFO     | mean x: 1764098129.0
[2025-11-26 00:58:48] 2025-11-25 23:57:45,900 | INFO     | mean y: 2569579.3837429113
[2025-11-26 00:58:48] 2025-11-25 23:57:45,900 | INFO     | intersect: 1344814376.824357
[2025-11-26 00:58:48] 2025-11-25 23:57:45,901 | INFO     | chi2: 0.183702933176949
[2025-11-26 00:58:48] 2025-11-25 23:57:45,901 | INFO     | current memory leak: -0.76 B/s (using 529 data points, chi2=0.18)
[2025-11-26 00:58:48] 2025-11-25 23:57:45,902 | INFO     | could have reported an average CPU frequency of 1999 MHz (21 samples)
[2025-11-26 00:58:48] 2025-11-25 23:57:45,902 | INFO     | ..............................
[2025-11-26 00:58:48] 2025-11-25 23:57:45,902 | INFO     | . Timing measurements:
[2025-11-26 00:58:48] 2025-11-25 23:57:45,902 | INFO     | . get job = 0 s
[2025-11-26 00:58:48] 2025-11-25 23:57:45,902 | INFO     | . initial setup = 14 s
[2025-11-26 00:58:48] 2025-11-25 23:57:45,903 | INFO     | . payload setup = 137 s
[2025-11-26 00:58:48] 2025-11-25 23:57:45,903 | INFO     | . stage-in = 0 s
[2025-11-26 00:58:48] 2025-11-25 23:57:45,903 | INFO     | . payload execution = 34244 s
[2025-11-26 00:58:48] 2025-11-25 23:57:45,903 | INFO     | . stage-out = 3 s
[2025-11-26 00:58:48] 2025-11-25 23:57:45,903 | INFO     | . log creation = 1 s
[2025-11-26 00:58:48] 2025-11-25 23:57:45,903 | INFO     | ..............................
[2025-11-26 00:58:48] 2025-11-25 23:57:46,482 | INFO     | 
[2025-11-26 00:58:48] 2025-11-25 23:57:46,482 | INFO     | job summary report
[2025-11-26 00:58:48] 2025-11-25 23:57:46,482 | INFO     | --------------------------------------------------
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | PanDA job id: 6894052094
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | task id: 47523659
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | errors: (none)
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | pilot state: finished 
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | transexitcode: 0
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | exeerrorcode: 0
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | exeerrordiag: 
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | exitcode: 0
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | exitmsg: OK
[2025-11-26 00:58:48] 2025-11-25 23:57:46,483 | INFO     | cpuconsumptiontime: 134088 s
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | nevents: 400
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | neventsw: 0
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | pid: 26002
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | pgrp: 26002
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | corecount: 8
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | event service: False
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | sizes: {0: 2283673, 1: 2283928, 2: 2283956, 13: 2283956, 23: 2284012, 34: 2284040, 45: 2284196, 56: 2284224, 66: 2284252, 77: 2284280, 88: 2284336, 91: 2284906, 99
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | --------------------------------------------------
[2025-11-26 00:58:48] 2025-11-25 23:57:46,484 | INFO     | 
[2025-11-26 00:58:48] 2025-11-25 23:57:46,485 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-26 00:58:48] 2025-11-25 23:57:46,561 | INFO     | time since job start (34688s) is within the limit (172800.0s)
[2025-11-26 00:58:48] 2025-11-25 23:57:46,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:58:48] 2025-11-25 23:57:46,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:58:48] 2025-11-25 23:57:46,999 | INFO     | job 6894052094 has completed (purged errors)
[2025-11-26 00:58:48] 2025-11-25 23:57:47,000 | INFO     | overall cleanup function is called
[2025-11-26 00:58:48] 2025-11-25 23:57:48,009 | INFO     | --- collectZombieJob: --- 10, [26002]
[2025-11-26 00:58:48] 2025-11-25 23:57:48,009 | INFO     | zombie collector waiting for pid 26002
[2025-11-26 00:58:48] 2025-11-25 23:57:48,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:58:48] 2025-11-25 23:57:48,010 | INFO     | collected zombie processes
[2025-11-26 00:58:48] 2025-11-25 23:57:48,010 | INFO     | will attempt to kill all subprocesses of pid=26002
[2025-11-26 00:58:48] 2025-11-25 23:57:48,141 | INFO     | process IDs to be killed: [26002] (in reverse order)
[2025-11-26 00:58:48] 2025-11-25 23:57:49,195 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:58:48] 2025-11-25 23:57:49,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:58:48] 2025-11-25 23:57:49,199 | INFO     | did not find any defunct processes belonging to 26002
[2025-11-26 00:58:48] 2025-11-25 23:57:49,202 | INFO     | did not find any defunct processes belonging to 26002
[2025-11-26 00:58:48] 2025-11-25 23:57:49,248 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:58:48] 2025-11-25 23:57:49,249 | INFO     | ready for new job
[2025-11-26 00:58:48] 2025-11-25 23:57:49,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:58:48] 2025-11-25 23:57:49,252 | INFO     | ***************************************
[2025-11-26 00:58:48] 2025-11-25 23:57:49,252 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:58:48] 2025-11-25 23:57:49,253 | INFO     | ***************************************
[2025-11-26 00:58:48] 2025-11-25 23:57:49,253 | INFO     | 
[2025-11-26 00:58:48] 2025-11-25 23:57:49,253 | INFO     | pilot is running in a VM
[2025-11-26 00:58:48] 2025-11-25 23:57:49,253 | INFO     | architecture information:
[2025-11-26 00:58:48] 2025-11-25 23:57:49,254 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:58:48] 2025-11-25 23:57:49,429 | INFO     | cat /etc/os-release:
[2025-11-26 00:58:48] NAME="CentOS Linux"
[2025-11-26 00:58:48] VERSION="7 (Core)"
[2025-11-26 00:58:48] ID="centos"
[2025-11-26 00:58:48] ID_LIKE="rhel fedora"
[2025-11-26 00:58:48] VERSION_ID="7"
[2025-11-26 00:58:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:58:48] ANSI_COLOR="0;31"
[2025-11-26 00:58:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:58:48] HOME_URL="https://www.centos.org/"
[2025-11-26 00:58:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:58:48] 
[2025-11-26 00:58:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:58:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:58:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:58:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:58:48] 
[2025-11-26 00:58:48] 2025-11-25 23:57:49,429 | INFO     | ***************************************
[2025-11-26 00:58:48] 2025-11-25 23:57:49,932 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-26 00:58:48] 2025-11-25 23:57:50,237 | INFO     | sufficient remaining disk space (496267952128 B)
[2025-11-26 00:58:48] 2025-11-25 23:57:50,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:58:48] 2025-11-25 23:57:50,238 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:58:48] 2025-11-25 23:57:50,238 | INFO     | update_server=False
[2025-11-26 00:58:48] 2025-11-25 23:57:50,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:58:48] 2025-11-25 23:57:50,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:58:48] 2025-11-25 23:57:50,238 | INFO     | aborting loop
[2025-11-26 00:58:48] 2025-11-25 23:57:50,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:58:48] 2025-11-25 23:57:50,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:58:48] 2025-11-25 23:57:50,898 | INFO     | all data control threads have been joined
[2025-11-26 00:58:48] 2025-11-25 23:57:51,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:58:48] 2025-11-25 23:57:51,077 | INFO     | all job control threads have been joined
[2025-11-26 00:58:48] 2025-11-25 23:57:51,178 | INFO     | all payload control threads have been joined
[2025-11-26 00:58:48] 2025-11-25 23:57:51,244 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:51,248 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:51,251 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:51,481 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:51,498 | INFO     | [job] validate thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:51,504 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:51,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:51,904 | INFO     | [data] control thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:52,056 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:52,084 | INFO     | [job] control thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:52,146 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:52,184 | INFO     | [payload] control thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:52,450 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:52,577 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:52,835 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:57:54,258 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:58:48] 2025-11-25 23:58:19,782 | INFO     | PID=19441 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 00:58:48] 2025-11-25 23:58:19,782 | INFO     | .. there are 9 such processes running
[2025-11-26 00:58:48] 2025-11-25 23:58:19,783 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:58:48] 2025-11-25 23:58:19,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:58:48] 2025-11-25 23:58:19,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:58:48] 2025-11-25 23:58:37,909 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:58:48] 2025-11-25 23:58:38,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323332134720)>', '<ExcThread(monitor, started 140322587784960)>']
[2025-11-26 00:58:48] 2025-11-25 23:58:38,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:58:48] 2025-11-25 23:58:38,897 | INFO     | [monitor] control thread has ended
[2025-11-26 00:58:48] 2025-11-25 23:58:43,656 | INFO     | all workflow threads have been joined
[2025-11-26 00:58:48] 2025-11-25 23:58:43,657 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:58:48] 2025-11-25 23:58:43,657 | INFO     | traces error code: 0
[2025-11-26 00:58:48] 2025-11-25 23:58:43,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:58:48] 2025-11-25 23:58:44,036 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:58:48] 2025-11-25 23:58:44,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:58:48] 2025-11-25 23:58:44,235 [wrapper] pilotpid: 19441
[2025-11-26 00:58:48] 2025-11-25 23:58:44,335 [wrapper] Pilot exit status: 0
[2025-11-26 00:58:48] 2025-11-25 23:58:44,817 [wrapper] pandaids: 6894052094
[2025-11-26 00:58:48] 2025-11-25 23:58:45,593 [wrapper] cleanup supervisor_pilot   801 19442
[2025-11-26 00:58:48] 2025-11-25 23:58:45,690 [wrapper] Test setup, not cleaning
[2025-11-26 00:58:48] 2025-11-25 23:58:45,784 [wrapper] apfmon messages muted
[2025-11-26 00:58:48] 2025-11-25 23:58:45,865 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:58:48] 2025-11-25 23:58:45,984 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:58:48]  *** Error codes and diagnostics ***
[2025-11-26 00:58:48]     "exeErrorCode": 0,
[2025-11-26 00:58:48]     "exeErrorDiag": "",
[2025-11-26 00:58:48]     "pilotErrorCode": 0,
[2025-11-26 00:58:48]     "pilotErrorDiag": "",
[2025-11-26 00:58:48]  *** Listing of results directory ***
[2025-11-26 00:58:48] total 626992
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc    576529 Nov 22 10:55 pilot3.tar.gz
[2025-11-26 00:58:48] -rwx------. 1 boinc boinc     36292 Nov 22 11:03 runpilot2-wrapper.sh
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc      5112 Nov 22 11:03 queuedata.json
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc       100 Nov 25 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:58:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 15:15 run_atlas
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc       105 Nov 25 15:15 job.xml
[2025-11-26 00:58:48] -rw-r--r--. 2 boinc boinc 302695544 Nov 25 15:15 EVNT.47523657._000003.pool.root.1
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc      6390 Nov 25 15:15 init_data.xml
[2025-11-26 00:58:48] -rw-r--r--. 2 boinc boinc     15847 Nov 25 15:15 start_atlas.sh
[2025-11-26 00:58:48] drwxrwx--x. 2 boinc boinc        68 Nov 25 15:15 shared
[2025-11-26 00:58:48] -rw-r--r--. 2 boinc boinc    589944 Nov 25 15:15 input.tar.gz
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc         0 Nov 25 15:15 boinc_lockfile
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc      2613 Nov 25 15:16 pandaJob.out
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc    991909 Nov 25 15:19 agis_schedconf.cvmfs.json
[2025-11-26 00:58:48] drwx------. 5 boinc boinc      4096 Nov 25 15:19 pilot3
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc 324815511 Nov 26 00:54 HITS.47523659._000068.pool.root.1
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc       532 Nov 26 00:54 boinc_task_state.xml
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc      1018 Nov 26 00:56 memory_monitor_summary.json
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc   1516240 Nov 26 00:56 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc    735009 Nov 26 00:56 log.47523659._000068.job.log.tgz.1
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc      7771 Nov 26 00:57 heartbeat.json
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc        95 Nov 26 00:57 pilot_heartbeat.json
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc      8192 Nov 26 00:58 boinc_mmap_file
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc        29 Nov 26 00:58 wrapper_checkpoint.txt
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc      4884 Nov 26 00:58 pilotlog.txt
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc   4576466 Nov 26 00:58 log.47523659._000068.job.log.1
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc       357 Nov 26 00:58 output.list
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc       620 Nov 26 00:58 runtime_log
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc   5335040 Nov 26 00:58 result.tar.gz
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc      8817 Nov 26 00:58 runtime_log.err
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc       659 Nov 26 00:58 ht1KDmQezg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml6JKDm39dclm.diag
[2025-11-26 00:58:48] -rw-r--r--. 1 boinc boinc     20920 Nov 26 00:58 stderr.txt
[2025-11-26 00:58:48] HITS file was successfully produced:
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc 324815511 Nov 26 00:54 shared/HITS.pool.root.1
[2025-11-26 00:58:48]  *** Contents of shared directory: ***
[2025-11-26 00:58:48] total 618616
[2025-11-26 00:58:48] -rw-r--r--. 2 boinc boinc 302695544 Nov 25 15:15 ATLAS.root_0
[2025-11-26 00:58:48] -rw-r--r--. 2 boinc boinc     15847 Nov 25 15:15 start_atlas.sh
[2025-11-26 00:58:48] -rw-r--r--. 2 boinc boinc    589944 Nov 25 15:15 input.tar.gz
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc 324815511 Nov 26 00:54 HITS.pool.root.1
[2025-11-26 00:58:48] -rw-------. 1 boinc boinc   5335040 Nov 26 00:58 result.tar.gz
00:58:50 (15652): run_atlas exited; CPU time 134570.320753
00:58:50 (15652): called boinc_finish(0)

</stderr_txt>
]]>

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