Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:31:14 (13041): wrapper (7.7.26015): starting
07:31:14 (13041): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 07:31:14] Arguments: --nthreads 8
[2025-11-26 07:31:14] Threads: 8
[2025-11-26 07:31:14] Checking for CVMFS
[2025-11-26 07:31:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:31:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:31:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:31:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:31:17] 2.11.2.0 18053 171818 139696 153312 3 84 20543955 25165824 4214 130560 11 56877362 99.908 26072827 2274 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 07:31:17] CVMFS is ok
[2025-11-26 07:31:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:31:17] Checking for apptainer binary...
[2025-11-26 07:31:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:31:17] Running /usr/bin/apptainer --version
[2025-11-26 07:31:17] apptainer version 1.3.2-1.el7
[2025-11-26 07:31:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:31:26] cg-vwn306.simple-grid.lan
[2025-11-26 07:31:26] apptainer works
[2025-11-26 07:31:26] Set ATHENA_PROC_NUMBER=8
[2025-11-26 07:31:26] Set ATHENA_CORE_NUMBER=8
[2025-11-26 07:31:26] Starting ATLAS job with PandaID=6895350466
[2025-11-26 07:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:13:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:13:36] 2025-11-27 06:12:20,977 | INFO     | monitor loop #5746: job 0:6895350466 is in state 'finished'
[2025-11-27 07:13:36] 2025-11-27 06:12:20,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:13:36] 2025-11-27 06:12:22,422 | INFO     | time since job start (85042s) is within the limit (172800.0s)
[2025-11-27 07:13:36] 2025-11-27 06:12:23,482 | INFO     | monitor loop #5747: job 0:6895350466 is in state 'finished'
[2025-11-27 07:13:36] 2025-11-27 06:12:23,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:13:36] 2025-11-27 06:12:24,432 | INFO     | time since job start (85044s) is within the limit (172800.0s)
[2025-11-27 07:13:36] 2025-11-27 06:12:25,987 | INFO     | monitor loop #5748: job 0:6895350466 is in state 'finished'
[2025-11-27 07:13:36] 2025-11-27 06:12:25,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:13:36] 2025-11-27 06:12:26,443 | INFO     | time since job start (85046s) is within the limit (172800.0s)
[2025-11-27 07:13:36] 2025-11-27 06:12:28,454 | INFO     | time since job start (85048s) is within the limit (172800.0s)
[2025-11-27 07:13:36] 2025-11-27 06:12:28,492 | INFO     | monitor loop #5749: job 0:6895350466 is in state 'finished'
[2025-11-27 07:13:36] 2025-11-27 06:12:28,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:13:36] 2025-11-27 06:12:30,461 | INFO     | time since job start (85050s) is within the limit (172800.0s)
[2025-11-27 07:13:36] 2025-11-27 06:12:30,999 | INFO     | monitor loop #5750: job 0:6895350466 is in state 'finished'
[2025-11-27 07:13:36] 2025-11-27 06:12:30,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:13:36] 2025-11-27 06:12:32,468 | INFO     | time since job start (85052s) is within the limit (172800.0s)
[2025-11-27 07:13:36] 2025-11-27 06:12:32,958 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 07:13:36] 2025-11-27 06:12:32,958 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-27 07:13:36] 2025-11-27 06:12:32,960 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895350466/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:13:36] 2025-11-27 06:12:32,961 | INFO     | extracted standard info from prmon json
[2025-11-27 07:13:36] 2025-11-27 06:12:32,961 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:13:36] 2025-11-27 06:12:32,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:13:36] 2025-11-27 06:12:32,986 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:13:36] 2025-11-27 06:12:32,988 | INFO     | sum of square deviations: 823809790988.7554
[2025-11-27 07:13:36] 2025-11-27 06:12:33,038 | INFO     | sum of deviations: 3852437441306.2456
[2025-11-27 07:13:36] 2025-11-27 06:12:33,039 | INFO     | mean x: 1764181617.067148
[2025-11-27 07:13:36] 2025-11-27 06:12:33,039 | INFO     | mean y: 2821288.3415162456
[2025-11-27 07:13:36] 2025-11-27 06:12:33,039 | INFO     | intersect: -8247140522.256151
[2025-11-27 07:13:36] 2025-11-27 06:12:33,041 | INFO     | chi2: 27.62776895137312
[2025-11-27 07:13:36] 2025-11-27 06:12:33,043 | INFO     | sum of square deviations: 814920270438.0369
[2025-11-27 07:13:36] 2025-11-27 06:12:33,095 | INFO     | sum of deviations: 4311836862631.7354
[2025-11-27 07:13:36] 2025-11-27 06:12:33,095 | INFO     | mean x: 1764181464.5710144
[2025-11-27 07:13:36] 2025-11-27 06:12:33,095 | INFO     | mean y: 2829168.7731884057
[2025-11-27 07:13:36] 2025-11-27 06:12:33,095 | INFO     | intersect: -9331657832.292688
[2025-11-27 07:13:36] 2025-11-27 06:12:33,097 | INFO     | chi2: 24.377133213297167
[2025-11-27 07:13:36] 2025-11-27 06:12:33,097 | INFO     | current chi2=24.377133213297167 (change=11.76582786614912 %)
[2025-11-27 07:13:36] 2025-11-27 06:12:33,097 | INFO     | right removable region: 1379
[2025-11-27 07:13:36] 2025-11-27 06:12:33,099 | INFO     | sum of square deviations: 814919368858.0365
[2025-11-27 07:13:36] 2025-11-27 06:12:33,158 | INFO     | sum of deviations: 3261245568028.9023
[2025-11-27 07:13:36] 2025-11-27 06:12:33,159 | INFO     | mean x: 1764181769.5710144
[2025-11-27 07:13:36] 2025-11-27 06:12:33,159 | INFO     | mean y: 2831429.3326086956
[2025-11-27 07:13:36] 2025-11-27 06:12:33,159 | INFO     | intersect: -7057290341.086542
[2025-11-27 07:13:36] 2025-11-27 06:12:33,161 | INFO     | chi2: 22.567199993773556
[2025-11-27 07:13:36] 2025-11-27 06:12:33,161 | INFO     | current chi2=22.567199993773556 (change=18.316965682268926 %)
[2025-11-27 07:13:36] 2025-11-27 06:12:33,161 | INFO     | left removable region: 10
[2025-11-27 07:13:36] 2025-11-27 06:12:33,163 | INFO     | sum of square deviations: 795587133738.3213
[2025-11-27 07:13:36] 2025-11-27 06:12:33,220 | INFO     | sum of deviations: 3285239917163.4653
[2025-11-27 07:13:36] 2025-11-27 06:12:33,220 | INFO     | mean x: 1764181739.0796201
[2025-11-27 07:13:36] 2025-11-27 06:12:33,220 | INFO     | mean y: 2850714.812271731
[2025-11-27 07:13:36] 2025-11-27 06:12:33,221 | INFO     | intersect: -7282033648.666549
[2025-11-27 07:13:36] 2025-11-27 06:12:33,222 | INFO     | chi2: 14.238703642642648
[2025-11-27 07:13:36] 2025-11-27 06:12:33,222 | INFO     | current memory leak: 4.13 B/s (using 1369 data points, chi2=14.24)
[2025-11-27 07:13:36] 2025-11-27 06:12:33,224 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 07:13:36] 2025-11-27 06:12:33,224 | INFO     | ..............................
[2025-11-27 07:13:36] 2025-11-27 06:12:33,224 | INFO     | . Timing measurements:
[2025-11-27 07:13:36] 2025-11-27 06:12:33,224 | INFO     | . get job = 0 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,224 | INFO     | . initial setup = 3 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,224 | INFO     | . payload setup = 162 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,224 | INFO     | . stage-in = 0 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,225 | INFO     | . payload execution = 84595 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,225 | INFO     | . stage-out = 7 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,225 | INFO     | . log creation = 2 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,225 | INFO     | ..............................
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | 
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | job summary report
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | --------------------------------------------------
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | PanDA job id: 6895350466
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | task id: 47556137
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | errors: (none)
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | pilot state: finished 
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | transexitcode: 0
[2025-11-27 07:13:36] 2025-11-27 06:12:33,340 | INFO     | exeerrorcode: 0
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | exeerrordiag: 
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | exitcode: 0
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | exitmsg: OK
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | cpuconsumptiontime: 319563 s
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | nevents: 1000
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | neventsw: 0
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | pid: 23424
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | pgrp: 23424
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | corecount: 8
[2025-11-27 07:13:36] 2025-11-27 06:12:33,341 | INFO     | event service: False
[2025-11-27 07:13:36] 2025-11-27 06:12:33,342 | INFO     | sizes: {0: 2284036, 1: 2284120, 2: 2284319, 12: 2284319, 23: 2284347, 34: 2284375, 45: 2284531, 55: 2284559, 66: 2284587, 77: 2284615, 88: 2284671, 96: 2285241, 99
[2025-11-27 07:13:36] 2025-11-27 06:12:33,342 | INFO     | --------------------------------------------------
[2025-11-27 07:13:36] 2025-11-27 06:12:33,342 | INFO     | 
[2025-11-27 07:13:36] 2025-11-27 06:12:33,342 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-27 07:13:36] 2025-11-27 06:12:33,371 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,371 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | job 6895350466 has completed (purged errors)
[2025-11-27 07:13:36] 2025-11-27 06:12:33,373 | INFO     | overall cleanup function is called
[2025-11-27 07:13:36] 2025-11-27 06:12:34,389 | INFO     | --- collectZombieJob: --- 10, [23424]
[2025-11-27 07:13:36] 2025-11-27 06:12:34,389 | INFO     | zombie collector waiting for pid 23424
[2025-11-27 07:13:36] 2025-11-27 06:12:34,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:13:36] 2025-11-27 06:12:34,389 | INFO     | collected zombie processes
[2025-11-27 07:13:36] 2025-11-27 06:12:34,390 | INFO     | will attempt to kill all subprocesses of pid=23424
[2025-11-27 07:13:36] 2025-11-27 06:12:34,479 | INFO     | process IDs to be killed: [23424] (in reverse order)
[2025-11-27 07:13:36] 2025-11-27 06:12:34,528 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:13:36] 2025-11-27 06:12:34,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:13:36] 2025-11-27 06:12:34,531 | INFO     | did not find any defunct processes belonging to 23424
[2025-11-27 07:13:36] 2025-11-27 06:12:34,534 | INFO     | did not find any defunct processes belonging to 23424
[2025-11-27 07:13:36] 2025-11-27 06:12:34,535 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:13:36] 2025-11-27 06:12:34,536 | INFO     | ready for new job
[2025-11-27 07:13:36] 2025-11-27 06:12:34,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:13:36] 2025-11-27 06:12:34,541 | INFO     | ***************************************
[2025-11-27 07:13:36] 2025-11-27 06:12:34,541 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:13:36] 2025-11-27 06:12:34,541 | INFO     | ***************************************
[2025-11-27 07:13:36] 2025-11-27 06:12:34,541 | INFO     | 
[2025-11-27 07:13:36] 2025-11-27 06:12:34,542 | INFO     | pilot is running in a VM
[2025-11-27 07:13:36] 2025-11-27 06:12:34,542 | INFO     | architecture information:
[2025-11-27 07:13:36] 2025-11-27 06:12:34,542 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:13:36] 2025-11-27 06:12:34,576 | INFO     | cat /etc/os-release:
[2025-11-27 07:13:36] NAME="CentOS Linux"
[2025-11-27 07:13:36] VERSION="7 (Core)"
[2025-11-27 07:13:36] ID="centos"
[2025-11-27 07:13:36] ID_LIKE="rhel fedora"
[2025-11-27 07:13:36] VERSION_ID="7"
[2025-11-27 07:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:13:36] ANSI_COLOR="0;31"
[2025-11-27 07:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:13:36] HOME_URL="https://www.centos.org/"
[2025-11-27 07:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:13:36] 
[2025-11-27 07:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:13:36] 
[2025-11-27 07:13:36] 2025-11-27 06:12:34,577 | INFO     | ***************************************
[2025-11-27 07:13:36] 2025-11-27 06:12:35,079 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-27 07:13:36] 2025-11-27 06:12:35,223 | INFO     | sufficient remaining disk space (495554920448 B)
[2025-11-27 07:13:36] 2025-11-27 06:12:35,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:13:36] 2025-11-27 06:12:35,223 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:13:36] 2025-11-27 06:12:35,223 | INFO     | update_server=False
[2025-11-27 07:13:36] 2025-11-27 06:12:35,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:13:36] 2025-11-27 06:12:35,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:13:36] 2025-11-27 06:12:35,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:13:36] 2025-11-27 06:12:35,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:13:36] 2025-11-27 06:12:35,226 | INFO     | aborting loop
[2025-11-27 07:13:36] 2025-11-27 06:12:35,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:13:36] 2025-11-27 06:12:35,532 | INFO     | all data control threads have been joined
[2025-11-27 07:13:36] 2025-11-27 06:12:36,091 | INFO     | all job control threads have been joined
[2025-11-27 07:13:36] 2025-11-27 06:12:36,229 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,230 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,232 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,423 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,523 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,538 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,539 | INFO     | [data] control thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,553 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,604 | INFO     | all payload control threads have been joined
[2025-11-27 07:13:36] 2025-11-27 06:12:36,839 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:36,900 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:37,097 | INFO     | [job] control thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:37,234 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:37,238 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:37,610 | INFO     | [payload] control thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:37,690 | INFO     | [job] validate thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:12:39,233 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:13:36] 2025-11-27 06:13:05,648 | INFO     | PID=16829 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 07:13:36] 2025-11-27 06:13:05,648 | INFO     | .. there are 9 such processes running
[2025-11-27 07:13:36] 2025-11-27 06:13:05,650 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:13:36] 2025-11-27 06:13:05,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:13:36] 2025-11-27 06:13:05,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:13:36] 2025-11-27 06:13:27,868 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:13:36] 2025-11-27 06:13:29,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413492774720)>', '<ExcThread(monitor, started 140413042140928)>']
[2025-11-27 07:13:36] 2025-11-27 06:13:29,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:13:36] 2025-11-27 06:13:29,791 | INFO     | [monitor] control thread has ended
[2025-11-27 07:13:36] 2025-11-27 06:13:34,289 | INFO     | all workflow threads have been joined
[2025-11-27 07:13:36] 2025-11-27 06:13:34,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:13:36] 2025-11-27 06:13:34,290 | INFO     | traces error code: 0
[2025-11-27 07:13:36] 2025-11-27 06:13:34,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:13:36] 2025-11-27 06:13:34,578 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:13:36] 2025-11-27 06:13:34,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:13:36] 2025-11-27 06:13:34,672 [wrapper] pilotpid: 16829
[2025-11-27 07:13:36] 2025-11-27 06:13:34,678 [wrapper] Pilot exit status: 0
[2025-11-27 07:13:36] 2025-11-27 06:13:34,698 [wrapper] pandaids: 6895350466
[2025-11-27 07:13:36] 2025-11-27 06:13:34,734 [wrapper] cleanup supervisor_pilot 25013 16830
[2025-11-27 07:13:36] 2025-11-27 06:13:34,837 [wrapper] Test setup, not cleaning
[2025-11-27 07:13:36] 2025-11-27 06:13:34,956 [wrapper] apfmon messages muted
[2025-11-27 07:13:36] 2025-11-27 06:13:35,031 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:13:36] 2025-11-27 06:13:35,079 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:13:36]  *** Error codes and diagnostics ***
[2025-11-27 07:13:36]     "exeErrorCode": 0,
[2025-11-27 07:13:36]     "exeErrorDiag": "",
[2025-11-27 07:13:36]     "pilotErrorCode": 0,
[2025-11-27 07:13:36]     "pilotErrorDiag": "",
[2025-11-27 07:13:36]  *** Listing of results directory ***
[2025-11-27 07:13:36] total 1323972
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc      5112 Nov 22 22:14 queuedata.json
[2025-11-27 07:13:36] -rwx------. 1 boinc boinc     36292 Nov 22 22:15 runpilot2-wrapper.sh
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc       100 Nov 26 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:13:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 07:31 run_atlas
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc       105 Nov 26 07:31 job.xml
[2025-11-27 07:13:36] -rw-r--r--. 2 boinc boinc 407307266 Nov 26 07:31 EVNT.47483658._000512.pool.root.1
[2025-11-27 07:13:36] -rw-r--r--. 2 boinc boinc    611276 Nov 26 07:31 input.tar.gz
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc      6391 Nov 26 07:31 init_data.xml
[2025-11-27 07:13:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 07:31 start_atlas.sh
[2025-11-27 07:13:36] drwxrwx--x. 2 boinc boinc        68 Nov 26 07:31 shared
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc         0 Nov 26 07:31 boinc_lockfile
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc      2784 Nov 26 07:31 pandaJob.out
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc    991877 Nov 26 07:34 agis_schedconf.cvmfs.json
[2025-11-27 07:13:36] drwx------. 7 boinc boinc      4096 Nov 26 07:35 pilot3
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc       533 Nov 27 06:46 boinc_task_state.xml
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc 916755266 Nov 27 07:09 HITS.47556137._005072.pool.root.1
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc      1030 Nov 27 07:10 memory_monitor_summary.json
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc   1516240 Nov 27 07:10 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc   2477686 Nov 27 07:10 log.47556137._005072.job.log.tgz.1
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc      8626 Nov 27 07:12 heartbeat.json
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc        95 Nov 27 07:13 pilot_heartbeat.json
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc        29 Nov 27 07:13 wrapper_checkpoint.txt
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc      8192 Nov 27 07:13 boinc_mmap_file
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc      4884 Nov 27 07:13 pilotlog.txt
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc  11390425 Nov 27 07:13 log.47556137._005072.job.log.1
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc       353 Nov 27 07:13 output.list
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc       620 Nov 27 07:13 runtime_log
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc  13885440 Nov 27 07:13 result.tar.gz
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc      8817 Nov 27 07:13 runtime_log.err
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc       662 Nov 27 07:13 rbSKDmC89g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpIIKDmAKx1Ym.diag
[2025-11-27 07:13:36] -rw-r--r--. 1 boinc boinc     21455 Nov 27 07:13 stderr.txt
[2025-11-27 07:13:36] HITS file was successfully produced:
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc 916755266 Nov 27 07:09 shared/HITS.pool.root.1
[2025-11-27 07:13:36]  *** Contents of shared directory: ***
[2025-11-27 07:13:36] total 1307212
[2025-11-27 07:13:36] -rw-r--r--. 2 boinc boinc 407307266 Nov 26 07:31 ATLAS.root_0
[2025-11-27 07:13:36] -rw-r--r--. 2 boinc boinc    611276 Nov 26 07:31 input.tar.gz
[2025-11-27 07:13:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 07:31 start_atlas.sh
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc 916755266 Nov 27 07:09 HITS.pool.root.1
[2025-11-27 07:13:36] -rw-------. 1 boinc boinc  13885440 Nov 27 07:13 result.tar.gz
07:13:38 (13041): run_atlas exited; CPU time 320149.494920
07:13:38 (13041): called boinc_finish(0)

</stderr_txt>
]]>

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