Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:06:22 (11526): wrapper (7.7.26015): starting
02:06:22 (11526): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 02:06:22] Arguments: --nthreads 8
[2025-11-26 02:06:22] Threads: 8
[2025-11-26 02:06:22] Checking for CVMFS
[2025-11-26 02:06:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:06:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:06:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:06:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:06:25] 2.11.2.0 5744 284638 142092 153303 2 85 20577196 25165824 4632 130560 12 162013603 99.890 80977457 3236 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 02:06:25] CVMFS is ok
[2025-11-26 02:06:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:06:25] Checking for apptainer binary...
[2025-11-26 02:06:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:06:25] Running /usr/bin/apptainer --version
[2025-11-26 02:06:25] apptainer version 1.3.2-1.el7
[2025-11-26 02:06:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:06:30] cg-vwn299.simple-grid.lan
[2025-11-26 02:06:30] apptainer works
[2025-11-26 02:06:30] Set ATHENA_PROC_NUMBER=8
[2025-11-26 02:06:30] Set ATHENA_CORE_NUMBER=8
[2025-11-26 02:06:30] Starting ATLAS job with PandaID=6895325964
[2025-11-26 02:06:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:23:13]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:23:13] 2025-11-27 01:21:53,404 | INFO     | time since job start (87080s) is within the limit (172800.0s)
[2025-11-27 02:23:13] 2025-11-27 01:21:55,170 | INFO     | monitor loop #5870: job 0:6895325964 is in state 'finished'
[2025-11-27 02:23:13] 2025-11-27 01:21:55,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:13] 2025-11-27 01:21:55,413 | INFO     | time since job start (87082s) is within the limit (172800.0s)
[2025-11-27 02:23:13] 2025-11-27 01:21:57,420 | INFO     | time since job start (87084s) is within the limit (172800.0s)
[2025-11-27 02:23:13] 2025-11-27 01:21:57,675 | INFO     | monitor loop #5871: job 0:6895325964 is in state 'finished'
[2025-11-27 02:23:13] 2025-11-27 01:21:57,676 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:13] 2025-11-27 01:21:59,427 | INFO     | time since job start (87086s) is within the limit (172800.0s)
[2025-11-27 02:23:13] 2025-11-27 01:22:00,180 | INFO     | monitor loop #5872: job 0:6895325964 is in state 'finished'
[2025-11-27 02:23:13] 2025-11-27 01:22:00,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:13] 2025-11-27 01:22:00,678 | INFO     | PID=15286 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 02:23:13] 2025-11-27 01:22:00,678 | INFO     | .. there are 9 such processes running
[2025-11-27 02:23:13] 2025-11-27 01:22:01,682 | INFO     | time since job start (87088s) is within the limit (172800.0s)
[2025-11-27 02:23:13] 2025-11-27 01:22:02,693 | INFO     | monitor loop #5873: job 0:6895325964 is in state 'finished'
[2025-11-27 02:23:13] 2025-11-27 01:22:02,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:23:13] 2025-11-27 01:22:03,689 | INFO     | time since job start (87090s) is within the limit (172800.0s)
[2025-11-27 02:23:13] 2025-11-27 01:22:04,634 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:23:13] 2025-11-27 01:22:04,635 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-27 02:23:13] 2025-11-27 01:22:04,637 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895325964/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:23:13] 2025-11-27 01:22:04,637 | INFO     | extracted standard info from prmon json
[2025-11-27 02:23:13] 2025-11-27 01:22:04,638 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:23:13] 2025-11-27 01:22:04,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:23:13] 2025-11-27 01:22:04,663 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:23:13] 2025-11-27 01:22:04,665 | INFO     | sum of square deviations: 882238916705.6396
[2025-11-27 02:23:13] 2025-11-27 01:22:04,734 | INFO     | sum of deviations: 3083414595275.916
[2025-11-27 02:23:13] 2025-11-27 01:22:04,734 | INFO     | mean x: 1764163176.1256175
[2025-11-27 02:23:13] 2025-11-27 01:22:04,734 | INFO     | mean y: 2843428.9498941423
[2025-11-27 02:23:13] 2025-11-27 01:22:04,735 | INFO     | intersect: -6162886038.104427
[2025-11-27 02:23:13] 2025-11-27 01:22:04,736 | INFO     | chi2: 20.040063167402902
[2025-11-27 02:23:13] 2025-11-27 01:22:04,738 | INFO     | sum of square deviations: 872933126359.2817
[2025-11-27 02:23:13] 2025-11-27 01:22:04,791 | INFO     | sum of deviations: 3565493269144.9062
[2025-11-27 02:23:13] 2025-11-27 01:22:04,792 | INFO     | mean x: 1764163023.6296034
[2025-11-27 02:23:13] 2025-11-27 01:22:04,792 | INFO     | mean y: 2851328.3420679886
[2025-11-27 02:23:13] 2025-11-27 01:22:04,792 | INFO     | intersect: -7202868327.022223
[2025-11-27 02:23:13] 2025-11-27 01:22:04,794 | INFO     | chi2: 16.67894683526608
[2025-11-27 02:23:13] 2025-11-27 01:22:04,794 | INFO     | current chi2=16.67894683526608 (change=16.77198471911009 %)
[2025-11-27 02:23:13] 2025-11-27 01:22:04,794 | INFO     | right removable region: 1411
[2025-11-27 02:23:13] 2025-11-27 01:22:04,796 | INFO     | sum of square deviations: 872932153409.2814
[2025-11-27 02:23:13] 2025-11-27 01:22:04,850 | INFO     | sum of deviations: 2490710200019.5376
[2025-11-27 02:23:13] 2025-11-27 01:22:04,850 | INFO     | mean x: 1764163328.6296034
[2025-11-27 02:23:13] 2025-11-27 01:22:04,850 | INFO     | mean y: 2853140.4943342777
[2025-11-27 02:23:13] 2025-11-27 01:22:04,850 | INFO     | intersect: -5030779290.109926
[2025-11-27 02:23:13] 2025-11-27 01:22:04,852 | INFO     | chi2: 15.403548460394862
[2025-11-27 02:23:13] 2025-11-27 01:22:04,852 | INFO     | current chi2=15.403548460394862 (change=23.136228006255884 %)
[2025-11-27 02:23:13] 2025-11-27 01:22:04,852 | INFO     | left removable region: 10
[2025-11-27 02:23:13] 2025-11-27 01:22:04,854 | INFO     | sum of square deviations: 852689292537.1381
[2025-11-27 02:23:13] 2025-11-27 01:22:04,912 | INFO     | sum of deviations: 2595321719947.979
[2025-11-27 02:23:13] 2025-11-27 01:22:04,912 | INFO     | mean x: 1764163298.1384726
[2025-11-27 02:23:13] 2025-11-27 01:22:04,912 | INFO     | mean y: 2870854.716630978
[2025-11-27 02:23:13] 2025-11-27 01:22:04,912 | INFO     | intersect: -5366695017.947853
[2025-11-27 02:23:13] 2025-11-27 01:22:04,914 | INFO     | chi2: 8.236843903513236
[2025-11-27 02:23:13] 2025-11-27 01:22:04,914 | INFO     | current memory leak: 3.04 B/s (using 1401 data points, chi2=8.24)
[2025-11-27 02:23:13] 2025-11-27 01:22:04,915 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | ..............................
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . Timing measurements:
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . get job = 0 s
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . initial setup = 11 s
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . payload setup = 188 s
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . stage-in = 0 s
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . payload execution = 86584 s
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . stage-out = 4 s
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | . log creation = 1 s
[2025-11-27 02:23:13] 2025-11-27 01:22:04,916 | INFO     | ..............................
[2025-11-27 02:23:13] 2025-11-27 01:22:05,023 | INFO     | 
[2025-11-27 02:23:13] 2025-11-27 01:22:05,023 | INFO     | job summary report
[2025-11-27 02:23:13] 2025-11-27 01:22:05,023 | INFO     | --------------------------------------------------
[2025-11-27 02:23:13] 2025-11-27 01:22:05,023 | INFO     | PanDA job id: 6895325964
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | task id: 47556137
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | errors: (none)
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | pilot state: finished 
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | transexitcode: 0
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | exeerrorcode: 0
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | exeerrordiag: 
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | exitcode: 0
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | exitmsg: OK
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | cpuconsumptiontime: 327009 s
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | nevents: 1000
[2025-11-27 02:23:13] 2025-11-27 01:22:05,024 | INFO     | neventsw: 0
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | pid: 21855
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | pgrp: 21855
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | corecount: 8
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | event service: False
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | sizes: {0: 2283482, 1: 2284167, 2: 2284366, 13: 2284366, 24: 2284422, 35: 2284450, 45: 2284606, 56: 2284634, 67: 2284662, 77: 2284690, 88: 2284746, 99: 2285054, 10
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | --------------------------------------------------
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | 
[2025-11-27 02:23:13] 2025-11-27 01:22:05,025 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-27 02:23:13] 2025-11-27 01:22:05,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,051 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | job 6895325964 has completed (purged errors)
[2025-11-27 02:23:13] 2025-11-27 01:22:05,053 | INFO     | overall cleanup function is called
[2025-11-27 02:23:13] 2025-11-27 01:22:06,069 | INFO     | --- collectZombieJob: --- 10, [21855]
[2025-11-27 02:23:13] 2025-11-27 01:22:06,070 | INFO     | zombie collector waiting for pid 21855
[2025-11-27 02:23:13] 2025-11-27 01:22:06,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:23:13] 2025-11-27 01:22:06,070 | INFO     | collected zombie processes
[2025-11-27 02:23:13] 2025-11-27 01:22:06,070 | INFO     | will attempt to kill all subprocesses of pid=21855
[2025-11-27 02:23:13] 2025-11-27 01:22:06,187 | INFO     | process IDs to be killed: [21855] (in reverse order)
[2025-11-27 02:23:13] 2025-11-27 01:22:07,265 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:23:13] 2025-11-27 01:22:07,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:23:13] 2025-11-27 01:22:07,269 | INFO     | did not find any defunct processes belonging to 21855
[2025-11-27 02:23:13] 2025-11-27 01:22:07,271 | INFO     | did not find any defunct processes belonging to 21855
[2025-11-27 02:23:13] 2025-11-27 01:22:07,273 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:23:13] 2025-11-27 01:22:07,273 | INFO     | ready for new job
[2025-11-27 02:23:13] 2025-11-27 01:22:07,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:23:13] 2025-11-27 01:22:07,278 | INFO     | ***************************************
[2025-11-27 02:23:13] 2025-11-27 01:22:07,278 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:23:13] 2025-11-27 01:22:07,278 | INFO     | ***************************************
[2025-11-27 02:23:13] 2025-11-27 01:22:07,278 | INFO     | 
[2025-11-27 02:23:13] 2025-11-27 01:22:07,279 | INFO     | pilot is running in a VM
[2025-11-27 02:23:13] 2025-11-27 01:22:07,279 | INFO     | architecture information:
[2025-11-27 02:23:13] 2025-11-27 01:22:07,279 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:23:13] 2025-11-27 01:22:07,387 | INFO     | cat /etc/os-release:
[2025-11-27 02:23:13] NAME="CentOS Linux"
[2025-11-27 02:23:13] VERSION="7 (Core)"
[2025-11-27 02:23:13] ID="centos"
[2025-11-27 02:23:13] ID_LIKE="rhel fedora"
[2025-11-27 02:23:13] VERSION_ID="7"
[2025-11-27 02:23:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:23:13] ANSI_COLOR="0;31"
[2025-11-27 02:23:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:23:13] HOME_URL="https://www.centos.org/"
[2025-11-27 02:23:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:23:13] 
[2025-11-27 02:23:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:23:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:23:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:23:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:23:13] 
[2025-11-27 02:23:13] 2025-11-27 01:22:07,387 | INFO     | ***************************************
[2025-11-27 02:23:13] 2025-11-27 01:22:07,892 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-27 02:23:13] 2025-11-27 01:22:08,020 | INFO     | sufficient remaining disk space (495369322496 B)
[2025-11-27 02:23:13] 2025-11-27 01:22:08,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:23:13] 2025-11-27 01:22:08,020 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:23:13] 2025-11-27 01:22:08,020 | INFO     | update_server=False
[2025-11-27 02:23:13] 2025-11-27 01:22:08,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:23:13] 2025-11-27 01:22:08,373 | INFO     | all payload control threads have been joined
[2025-11-27 02:23:13] 2025-11-27 01:22:08,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:23:13] 2025-11-27 01:22:08,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:23:13] 2025-11-27 01:22:08,727 | INFO     | aborting loop
[2025-11-27 02:23:13] 2025-11-27 01:22:08,852 | INFO     | all data control threads have been joined
[2025-11-27 02:23:13] 2025-11-27 01:22:08,966 | INFO     | all job control threads have been joined
[2025-11-27 02:23:13] 2025-11-27 01:22:09,027 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,104 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,163 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:23:13] 2025-11-27 01:22:09,379 | INFO     | [payload] control thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,733 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,841 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,858 | INFO     | [data] control thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,884 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,922 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:09,973 | INFO     | [job] control thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:10,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:23:13] 2025-11-27 01:22:10,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:10,276 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:10,456 | INFO     | [job] validate thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:10,468 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:11,043 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:13,190 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:23:13] 2025-11-27 01:22:36,880 | INFO     | PID=15286 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 02:23:13] 2025-11-27 01:22:36,880 | INFO     | .. there are 9 such processes running
[2025-11-27 02:23:13] 2025-11-27 01:22:36,881 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:23:13] 2025-11-27 01:22:36,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:23:13] 2025-11-27 01:22:36,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:23:13] 2025-11-27 01:23:04,577 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:23:13] 2025-11-27 01:23:05,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421623547712)>', '<ExcThread(monitor, started 140421179098880)>']
[2025-11-27 02:23:13] 2025-11-27 01:23:06,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:23:13] 2025-11-27 01:23:06,053 | INFO     | [monitor] control thread has ended
[2025-11-27 02:23:13] 2025-11-27 01:23:10,254 | INFO     | all workflow threads have been joined
[2025-11-27 02:23:13] 2025-11-27 01:23:10,255 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:23:13] 2025-11-27 01:23:10,255 | INFO     | traces error code: 0
[2025-11-27 02:23:13] 2025-11-27 01:23:10,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:23:13] 2025-11-27 01:23:10,580 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:23:13] 2025-11-27 01:23:10,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:23:13] 2025-11-27 01:23:10,719 [wrapper] pilotpid: 15286
[2025-11-27 02:23:13] 2025-11-27 01:23:10,786 [wrapper] Pilot exit status: 0
[2025-11-27 02:23:13] 2025-11-27 01:23:11,162 [wrapper] pandaids: 6895325964
[2025-11-27 02:23:13] 2025-11-27 01:23:12,132 [wrapper] cleanup supervisor_pilot 24049 15287
[2025-11-27 02:23:13] 2025-11-27 01:23:12,145 [wrapper] Test setup, not cleaning
[2025-11-27 02:23:13] 2025-11-27 01:23:12,158 [wrapper] apfmon messages muted
[2025-11-27 02:23:13] 2025-11-27 01:23:12,164 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:23:13] 2025-11-27 01:23:12,181 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:23:13]  *** Error codes and diagnostics ***
[2025-11-27 02:23:13]     "exeErrorCode": 0,
[2025-11-27 02:23:13]     "exeErrorDiag": "",
[2025-11-27 02:23:13]     "pilotErrorCode": 0,
[2025-11-27 02:23:13]     "pilotErrorDiag": "",
[2025-11-27 02:23:13]  *** Listing of results directory ***
[2025-11-27 02:23:13] total 1339572
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc    576529 Nov 21 15:47 pilot3.tar.gz
[2025-11-27 02:23:13] -rwx------. 1 boinc boinc     36292 Nov 21 16:06 runpilot2-wrapper.sh
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc      5112 Nov 21 16:06 queuedata.json
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc       100 Nov 26 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:23:13] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 02:06 run_atlas
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc       105 Nov 26 02:06 job.xml
[2025-11-27 02:23:13] -rw-r--r--. 2 boinc boinc 411178215 Nov 26 02:06 EVNT.47483658._000039.pool.root.1
[2025-11-27 02:23:13] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:06 start_atlas.sh
[2025-11-27 02:23:13] drwxrwx--x. 2 boinc boinc        68 Nov 26 02:06 shared
[2025-11-27 02:23:13] -rw-r--r--. 2 boinc boinc    590090 Nov 26 02:06 input.tar.gz
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc      6390 Nov 26 02:06 init_data.xml
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc         0 Nov 26 02:06 boinc_lockfile
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc      2783 Nov 26 02:06 pandaJob.out
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc    991877 Nov 26 02:10 agis_schedconf.cvmfs.json
[2025-11-27 02:23:13] drwx------. 5 boinc boinc      4096 Nov 26 02:10 pilot3
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc       533 Nov 27 01:57 boinc_task_state.xml
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc 928480612 Nov 27 02:19 HITS.47556137._000382.pool.root.1
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc      1031 Nov 27 02:20 memory_monitor_summary.json
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc   1516240 Nov 27 02:20 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc   2487282 Nov 27 02:20 log.47556137._000382.job.log.tgz.1
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc      8626 Nov 27 02:22 heartbeat.json
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc        95 Nov 27 02:22 pilot_heartbeat.json
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc      8192 Nov 27 02:23 boinc_mmap_file
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc        29 Nov 27 02:23 wrapper_checkpoint.txt
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc      4884 Nov 27 02:23 pilotlog.txt
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc  11591441 Nov 27 02:23 log.47556137._000382.job.log.1
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc       353 Nov 27 02:23 output.list
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc       620 Nov 27 02:23 runtime_log
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc  14100480 Nov 27 02:23 result.tar.gz
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc      8817 Nov 27 02:23 runtime_log.err
[2025-11-27 02:23:13] -rw-------. 1 boinc boinc       662 Nov 27 02:23 NbOLDmuthg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1gHKDmy9UBPo.diag
[2025-11-27 02:23:13] -rw-r--r--. 1 boinc boinc     21514 Nov 27 02:23 stderr.txt
[2025-11-27 02:23:14] HITS file was successfully produced:
[2025-11-27 02:23:14] -rw-------. 1 boinc boinc 928480612 Nov 27 02:19 shared/HITS.pool.root.1
[2025-11-27 02:23:14]  *** Contents of shared directory: ***
[2025-11-27 02:23:14] total 1322632
[2025-11-27 02:23:14] -rw-r--r--. 2 boinc boinc 411178215 Nov 26 02:06 ATLAS.root_0
[2025-11-27 02:23:14] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:06 start_atlas.sh
[2025-11-27 02:23:14] -rw-r--r--. 2 boinc boinc    590090 Nov 26 02:06 input.tar.gz
[2025-11-27 02:23:14] -rw-------. 1 boinc boinc 928480612 Nov 27 02:19 HITS.pool.root.1
[2025-11-27 02:23:14] -rw-------. 1 boinc boinc  14100480 Nov 27 02:23 result.tar.gz
02:23:15 (11526): run_atlas exited; CPU time 327635.576389
02:23:15 (11526): called boinc_finish(0)

</stderr_txt>
]]>

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