Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:47:36 (2744309): wrapper (7.7.26015): starting
09:47:36 (2744309): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 09:47:36] Arguments: --nthreads 3
[2025-11-23 09:47:36] Threads: 3
[2025-11-23 09:47:36] Checking for CVMFS
[2025-11-23 09:47:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 09:47:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 09:47:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 09:47:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 09:47:36] 2.9.2.0 2639879 23 53432 153202 0 88 34813581 36864001 0 130560 0 312992 100.000 1294 11981 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 09:47:36] CVMFS is ok
[2025-11-23 09:47:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 09:47:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 09:47:36] Further information can be found at the LHC@home message board.
[2025-11-23 09:47:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 09:47:36] Checking for apptainer binary...
[2025-11-23 09:47:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 09:47:36] Running /usr/bin/apptainer --version
[2025-11-23 09:47:36] apptainer version 1.4.1-1.1
[2025-11-23 09:47:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 09:47:36] thA335
[2025-11-23 09:47:36] apptainer works
[2025-11-23 09:47:36] Set ATHENA_PROC_NUMBER=3
[2025-11-23 09:47:36] Set ATHENA_CORE_NUMBER=3
[2025-11-23 09:47:36] Starting ATLAS job with PandaID=6895338579
[2025-11-23 09:47:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:51:54]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:51:54] NAME="CentOS Linux"
[2025-11-23 09:51:54] VERSION="7 (Core)"
[2025-11-23 09:51:54] ID="centos"
[2025-11-23 09:51:54] ID_LIKE="rhel fedora"
[2025-11-23 09:51:54] VERSION_ID="7"
[2025-11-23 09:51:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:51:54] ANSI_COLOR="0;31"
[2025-11-23 09:51:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:51:54] HOME_URL="https://www.centos.org/"
[2025-11-23 09:51:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:51:54] 
[2025-11-23 09:51:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:51:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:51:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:51:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:51:54] 
[2025-11-23 09:51:54] 2025-11-23 08:50:58,086 | INFO     | ***************************************
[2025-11-23 09:51:54] 2025-11-23 08:50:58,589 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 09:51:54] 2025-11-23 08:50:58,604 | INFO     | sufficient remaining disk space (827225800704 B)
[2025-11-23 09:51:54] 2025-11-23 08:50:58,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:51:54] 2025-11-23 08:50:58,604 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:51:54] 2025-11-23 08:50:58,604 | INFO     | update_server=False
[2025-11-23 09:51:54] 2025-11-23 08:50:58,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:51:54] 2025-11-23 08:50:58,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:51:54] 2025-11-23 08:50:58,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:51:54] 2025-11-23 08:50:58,662 | INFO     | all data control threads have been joined
[2025-11-23 09:51:54] 2025-11-23 08:50:58,986 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 09:51:54] 2025-11-23 08:50:58,986 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 09:51:54] 2025-11-23 08:50:58,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:51:54] 2025-11-23 08:50:58,987 | INFO     | will abort loop
[2025-11-23 09:51:54] 2025-11-23 08:50:59,610 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:50:59,610 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:50:59,628 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:50:59,668 | INFO     | [data] control thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:50:59,891 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:50:59,945 | INFO     | all job control threads have been joined
[2025-11-23 09:51:54] 2025-11-23 08:50:59,986 | INFO     | all payload control threads have been joined
[2025-11-23 09:51:54] 2025-11-23 08:50:59,993 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,298 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,304 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,609 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,915 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,951 | INFO     | [job] control thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,991 | INFO     | [payload] control thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:00,991 | INFO     | [job] validate thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:01,066 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:01,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:51:54] 2025-11-23 08:51:05,676 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:51:54] 2025-11-23 08:51:29,608 | INFO     | PID=2748035 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 09:51:54] 2025-11-23 08:51:29,608 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:51:54] 2025-11-23 08:51:29,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:51:54] 2025-11-23 08:51:29,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:51:54] 2025-11-23 08:51:48,768 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:51:54] 2025-11-23 08:51:49,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631000229696)>', '<ExcThread(monitor, started 139629831374592)>']
[2025-11-23 09:51:54] 2025-11-23 08:51:49,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:51:54] 2025-11-23 08:51:49,716 | INFO     | [monitor] control thread has ended
[2025-11-23 09:51:54] 2025-11-23 08:51:54,556 | INFO     | all workflow threads have been joined
[2025-11-23 09:51:54] 2025-11-23 08:51:54,556 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:51:54] 2025-11-23 08:51:54,557 | INFO     | traces error code: 0
[2025-11-23 09:51:54] 2025-11-23 08:51:54,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:51:54] 2025-11-23 08:51:54,606 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:51:54] 2025-11-23 08:51:54,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:51:54] 2025-11-23 08:51:54,612 [wrapper] pilotpid: 2748035
[2025-11-23 09:51:54] 2025-11-23 08:51:54,614 [wrapper] Pilot exit status: 0
[2025-11-23 09:51:54] 2025-11-23 08:51:54,621 [wrapper] pandaids: 6895338579
[2025-11-23 09:51:54] 2025-11-23 08:51:54,639 [wrapper] cleanup supervisor_pilot 2748041 2748036
[2025-11-23 09:51:54] 2025-11-23 08:51:54,642 [wrapper] Test setup, not cleaning
[2025-11-23 09:51:54] 2025-11-23 08:51:54,645 [wrapper] apfmon messages muted
[2025-11-23 09:51:54] 2025-11-23 08:51:54,648 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:51:54] 2025-11-23 08:51:54,651 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:51:54]  *** Error codes and diagnostics ***
[2025-11-23 09:51:54]     "exeErrorCode": 65,
[2025-11-23 09:51:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 09:51:54]     "pilotErrorCode": 1305,
[2025-11-23 09:51:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 09:51:54]  *** Listing of results directory ***
[2025-11-23 09:51:54] total 404944
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc    576529 Nov 22 10:26 pilot3.tar.gz
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc      5112 Nov 22 10:32 queuedata.json
[2025-11-23 09:51:54] -rwx------ 1 boinc boinc     36292 Nov 22 10:36 runpilot2-wrapper.sh
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc       100 Nov 23 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:51:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 09:47 run_atlas
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc       105 Nov 23 09:47 job.xml
[2025-11-23 09:51:54] -rw-r--r-- 2 boinc boinc 410465490 Nov 23 09:47 EVNT.47483658._000333.pool.root.1
[2025-11-23 09:51:54] -rw-r--r-- 2 boinc boinc    590097 Nov 23 09:47 input.tar.gz
[2025-11-23 09:51:54] -rw-r--r-- 2 boinc boinc     15847 Nov 23 09:47 start_atlas.sh
[2025-11-23 09:51:54] drwxrwx--x 2 boinc boinc      4096 Nov 23 09:47 shared
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc         0 Nov 23 09:47 boinc_setup_complete
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc      6194 Nov 23 09:47 init_data.xml
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc         0 Nov 23 09:47 boinc_lockfile
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc      2785 Nov 23 09:47 pandaJob.out
[2025-11-23 09:51:54] -rw------- 1 boinc boinc    989784 Nov 23 09:47 agis_schedconf.cvmfs.json
[2025-11-23 09:51:54] -rw------- 1 boinc boinc   1526164 Nov 23 09:47 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:51:54] drwx------ 5 boinc boinc      4096 Nov 23 09:47 pilot3
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc       522 Nov 23 09:48 boinc_task_state.xml
[2025-11-23 09:51:54] -rw------- 1 boinc boinc       955 Nov 23 09:48 memory_monitor_summary.json
[2025-11-23 09:51:54] -rw------- 1 boinc boinc     56008 Nov 23 09:48 log.47556137._003293.job.log.tgz.1
[2025-11-23 09:51:54] -rw------- 1 boinc boinc        95 Nov 23 09:50 pilot_heartbeat.json
[2025-11-23 09:51:54] -rw------- 1 boinc boinc      8384 Nov 23 09:50 heartbeat.json
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc      8192 Nov 23 09:51 boinc_mmap_file
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc        22 Nov 23 09:51 wrapper_checkpoint.txt
[2025-11-23 09:51:54] -rw------- 1 boinc boinc      4938 Nov 23 09:51 pilotlog.txt
[2025-11-23 09:51:54] -rw------- 1 boinc boinc     91797 Nov 23 09:51 log.47556137._003293.job.log.1
[2025-11-23 09:51:54] -rw------- 1 boinc boinc       186 Nov 23 09:51 output.list
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc       620 Nov 23 09:51 runtime_log
[2025-11-23 09:51:54] -rw------- 1 boinc boinc    163840 Nov 23 09:51 result.tar.gz
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc      8744 Nov 23 09:51 runtime_log.err
[2025-11-23 09:51:54] -rw------- 1 boinc boinc       649 Nov 23 09:51 kVgKDmSDzg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmP3HKDmN1Wbcm.diag
[2025-11-23 09:51:54] -rw-r--r-- 1 boinc boinc      9310 Nov 23 09:51 stderr.txt
[2025-11-23 09:51:54] No HITS result produced
[2025-11-23 09:51:54]  *** Contents of shared directory: ***
[2025-11-23 09:51:54] total 401608
[2025-11-23 09:51:54] -rw-r--r-- 2 boinc boinc 410465490 Nov 23 09:47 ATLAS.root_0
[2025-11-23 09:51:54] -rw-r--r-- 2 boinc boinc    590097 Nov 23 09:47 input.tar.gz
[2025-11-23 09:51:54] -rw-r--r-- 2 boinc boinc     15847 Nov 23 09:47 start_atlas.sh
[2025-11-23 09:51:54] -rw------- 1 boinc boinc    163840 Nov 23 09:51 result.tar.gz
09:51:55 (2744309): run_atlas exited; CPU time 30.401361
09:51:55 (2744309): called boinc_finish(0)

</stderr_txt>
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