Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:46:20 (2576953): wrapper (7.7.26015): starting
08:46:20 (2576953): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 08:46:20] Arguments: --nthreads 3
[2025-11-23 08:46:20] Threads: 3
[2025-11-23 08:46:20] Checking for CVMFS
[2025-11-23 08:46:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:46:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:46:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:46:21] 2.9.2.0 2430758 30 53192 153201 1 88 34810682 36864001 0 130560 0 438317 100.000 4 47 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 08:46:21] CVMFS is ok
[2025-11-23 08:46:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:46:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:46:21] Further information can be found at the LHC@home message board.
[2025-11-23 08:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:46:21] Checking for apptainer binary...
[2025-11-23 08:46:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:46:21] Running /usr/bin/apptainer --version
[2025-11-23 08:46:21] apptainer version 1.4.1-1.1
[2025-11-23 08:46:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:46:21] thA335
[2025-11-23 08:46:21] apptainer works
[2025-11-23 08:46:21] Set ATHENA_PROC_NUMBER=3
[2025-11-23 08:46:21] Set ATHENA_CORE_NUMBER=3
[2025-11-23 08:46:21] Starting ATLAS job with PandaID=6895338627
[2025-11-23 08:46:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 08:50:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 08:50:37] 2025-11-23 07:49:41,658 | INFO     | 
[2025-11-23 08:50:37] 2025-11-23 07:49:41,659 | INFO     | architecture information:
[2025-11-23 08:50:37] 2025-11-23 07:49:41,659 | INFO     | executing command: cat /etc/os-release
[2025-11-23 08:50:37] 2025-11-23 07:49:41,668 | INFO     | cat /etc/os-release:
[2025-11-23 08:50:37] NAME="CentOS Linux"
[2025-11-23 08:50:37] VERSION="7 (Core)"
[2025-11-23 08:50:37] ID="centos"
[2025-11-23 08:50:37] ID_LIKE="rhel fedora"
[2025-11-23 08:50:37] VERSION_ID="7"
[2025-11-23 08:50:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 08:50:37] ANSI_COLOR="0;31"
[2025-11-23 08:50:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 08:50:37] HOME_URL="https://www.centos.org/"
[2025-11-23 08:50:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 08:50:37] 
[2025-11-23 08:50:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 08:50:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 08:50:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 08:50:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 08:50:37] 
[2025-11-23 08:50:37] 2025-11-23 07:49:41,668 | INFO     | ***************************************
[2025-11-23 08:50:37] 2025-11-23 07:49:42,172 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 08:50:37] 2025-11-23 07:49:42,185 | INFO     | sufficient remaining disk space (826823147520 B)
[2025-11-23 08:50:37] 2025-11-23 07:49:42,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 08:50:37] 2025-11-23 07:49:42,185 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 08:50:37] 2025-11-23 07:49:42,185 | INFO     | update_server=False
[2025-11-23 08:50:37] 2025-11-23 07:49:42,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 08:50:37] 2025-11-23 07:49:42,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:50:37] 2025-11-23 07:49:42,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:50:37] 2025-11-23 07:49:42,191 | INFO     | aborting loop
[2025-11-23 08:50:37] 2025-11-23 07:49:42,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 08:50:37] 2025-11-23 07:49:43,018 | INFO     | all data control threads have been joined
[2025-11-23 08:50:37] 2025-11-23 07:49:43,191 | INFO     | [job] queue monitor thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:43,192 | INFO     | [job] retrieve thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:43,193 | INFO     | [job] job monitor thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:43,231 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:43,310 | INFO     | [payload] failed_post thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:43,622 | INFO     | all payload control threads have been joined
[2025-11-23 08:50:37] 2025-11-23 07:49:43,780 | INFO     | all job control threads have been joined
[2025-11-23 08:50:37] 2025-11-23 07:49:43,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 08:50:37] 2025-11-23 07:49:44,024 | INFO     | [data] control thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,049 | INFO     | [payload] validate_post thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,232 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,445 | INFO     | [data] copytool_in thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,596 | INFO     | [job] validate thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,628 | INFO     | [payload] control thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,686 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,786 | INFO     | [job] control thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:44,998 | INFO     | [data] copytool_out thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:49:47,812 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 08:50:37] 2025-11-23 07:50:11,834 | INFO     | PID=2580680 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 08:50:37] 2025-11-23 07:50:11,834 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 08:50:37] 2025-11-23 07:50:11,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 08:50:37] 2025-11-23 07:50:11,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 08:50:37] 2025-11-23 07:50:30,822 | INFO     | [monitor] cgroup control has ended
[2025-11-23 08:50:37] 2025-11-23 07:50:31,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197537097536)>', '<ExcThread(monitor, started 140196884489984)>']
[2025-11-23 08:50:37] 2025-11-23 07:50:31,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 08:50:37] 2025-11-23 07:50:31,942 | INFO     | [monitor] control thread has ended
[2025-11-23 08:50:37] 2025-11-23 07:50:36,853 | INFO     | all workflow threads have been joined
[2025-11-23 08:50:37] 2025-11-23 07:50:36,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 08:50:37] 2025-11-23 07:50:36,854 | INFO     | traces error code: 0
[2025-11-23 08:50:37] 2025-11-23 07:50:36,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 08:50:37] 2025-11-23 07:50:36,901 [wrapper] ==== pilot stdout END ====
[2025-11-23 08:50:37] 2025-11-23 07:50:36,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 08:50:37] 2025-11-23 07:50:36,908 [wrapper] pilotpid: 2580680
[2025-11-23 08:50:37] 2025-11-23 07:50:36,911 [wrapper] Pilot exit status: 0
[2025-11-23 08:50:37] 2025-11-23 07:50:36,918 [wrapper] pandaids: 6895338627
[2025-11-23 08:50:37] 2025-11-23 07:50:36,936 [wrapper] cleanup supervisor_pilot 2580686 2580681
[2025-11-23 08:50:37] 2025-11-23 07:50:36,938 [wrapper] Test setup, not cleaning
[2025-11-23 08:50:37] 2025-11-23 07:50:36,941 [wrapper] apfmon messages muted
[2025-11-23 08:50:37] 2025-11-23 07:50:36,943 [wrapper] ==== wrapper stdout END ====
[2025-11-23 08:50:37] 2025-11-23 07:50:36,945 [wrapper] ==== wrapper stderr END ====
[2025-11-23 08:50:37]  *** Error codes and diagnostics ***
[2025-11-23 08:50:37]     "exeErrorCode": 65,
[2025-11-23 08:50:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 08:50:37]     "pilotErrorCode": 1305,
[2025-11-23 08:50:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 08:50:37]  *** Listing of results directory ***
[2025-11-23 08:50:37] total 404136
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc    576529 Nov 22 10:26 pilot3.tar.gz
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc      5112 Nov 22 10:38 queuedata.json
[2025-11-23 08:50:37] -rwx------ 1 boinc boinc     36292 Nov 22 10:38 runpilot2-wrapper.sh
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc       100 Nov 23 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 08:50:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 08:46 run_atlas
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc       105 Nov 23 08:46 job.xml
[2025-11-23 08:50:37] -rw-r--r-- 2 boinc boinc 409645386 Nov 23 08:46 EVNT.47483658._001081.pool.root.1
[2025-11-23 08:50:37] -rw-r--r-- 2 boinc boinc    590102 Nov 23 08:46 input.tar.gz
[2025-11-23 08:50:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:46 start_atlas.sh
[2025-11-23 08:50:37] drwxrwx--x 2 boinc boinc      4096 Nov 23 08:46 shared
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:46 boinc_setup_complete
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc      6194 Nov 23 08:46 init_data.xml
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:46 boinc_lockfile
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc      2784 Nov 23 08:46 pandaJob.out
[2025-11-23 08:50:37] -rw------- 1 boinc boinc    989784 Nov 23 08:46 agis_schedconf.cvmfs.json
[2025-11-23 08:50:37] -rw------- 1 boinc boinc   1526164 Nov 23 08:46 agis_ddmendpoints.agis.ALL.json
[2025-11-23 08:50:37] drwx------ 5 boinc boinc      4096 Nov 23 08:46 pilot3
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc       522 Nov 23 08:47 boinc_task_state.xml
[2025-11-23 08:50:37] -rw------- 1 boinc boinc       948 Nov 23 08:47 memory_monitor_summary.json
[2025-11-23 08:50:37] -rw------- 1 boinc boinc     55770 Nov 23 08:47 log.47556149._000675.job.log.tgz.1
[2025-11-23 08:50:37] -rw------- 1 boinc boinc        95 Nov 23 08:49 pilot_heartbeat.json
[2025-11-23 08:50:37] -rw------- 1 boinc boinc      8394 Nov 23 08:49 heartbeat.json
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc      8192 Nov 23 08:50 boinc_mmap_file
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc        22 Nov 23 08:50 wrapper_checkpoint.txt
[2025-11-23 08:50:37] -rw------- 1 boinc boinc      4752 Nov 23 08:50 pilotlog.txt
[2025-11-23 08:50:37] -rw------- 1 boinc boinc     91595 Nov 23 08:50 log.47556149._000675.job.log.1
[2025-11-23 08:50:37] -rw------- 1 boinc boinc       186 Nov 23 08:50 output.list
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc       620 Nov 23 08:50 runtime_log
[2025-11-23 08:50:37] -rw------- 1 boinc boinc    163840 Nov 23 08:50 result.tar.gz
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc      8744 Nov 23 08:50 runtime_log.err
[2025-11-23 08:50:37] -rw------- 1 boinc boinc       649 Nov 23 08:50 gMnNDmTFzg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmY3HKDmLVdXHo.diag
[2025-11-23 08:50:37] -rw-r--r-- 1 boinc boinc      9397 Nov 23 08:50 stderr.txt
[2025-11-23 08:50:37] No HITS result produced
[2025-11-23 08:50:37]  *** Contents of shared directory: ***
[2025-11-23 08:50:37] total 400804
[2025-11-23 08:50:37] -rw-r--r-- 2 boinc boinc 409645386 Nov 23 08:46 ATLAS.root_0
[2025-11-23 08:50:37] -rw-r--r-- 2 boinc boinc    590102 Nov 23 08:46 input.tar.gz
[2025-11-23 08:50:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:46 start_atlas.sh
[2025-11-23 08:50:37] -rw------- 1 boinc boinc    163840 Nov 23 08:50 result.tar.gz
08:50:38 (2576953): run_atlas exited; CPU time 30.233011
08:50:38 (2576953): called boinc_finish(0)

</stderr_txt>
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