Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:03:30 (3497410): wrapper (7.7.26015): starting
21:03:30 (3497410): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 21:03:30] Arguments: --nthreads 8
[2025-11-23 21:03:30] Threads: 8
[2025-11-23 21:03:30] Checking for CVMFS
[2025-11-23 21:03:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:03:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:03:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:03:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:03:33] 2.13.3.0 9955 26500 327236 153228 0 666 30566076 32935937 22185 16776704 0 158063394 99.797 83276262 33209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 21:03:33] CVMFS is ok
[2025-11-23 21:03:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:03:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:03:33] Further information can be found at the LHC@home message board.
[2025-11-23 21:03:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:03:33] Checking for apptainer binary...
[2025-11-23 21:03:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:03:33] Running /usr/bin/apptainer --version
[2025-11-23 21:03:33] apptainer version 1.4.4-1.el9
[2025-11-23 21:03:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:03:34] c-5-1.aglt2.org
[2025-11-23 21:03:34] apptainer works
[2025-11-23 21:03:34] Set ATHENA_PROC_NUMBER=8
[2025-11-23 21:03:34] Set ATHENA_CORE_NUMBER=8
[2025-11-23 21:03:34] Starting ATLAS job with PandaID=6895338555
[2025-11-23 21:03:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:40:15]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:40:15] 2025-11-24 23:39:41,573 | INFO     | time since job start (77703s) is within the limit (172800.0s)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,417 | INFO     | monitor loop #4640: job 0:6895338555 is in state 'finished'
[2025-11-24 18:40:15] 2025-11-24 23:39:42,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,574 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 18:40:15] 2025-11-24 23:39:42,582 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0422499999995
[2025-11-24 18:40:15] 2025-11-24 23:39:42,589 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895338555/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,590 | INFO     | extracted standard info from prmon json
[2025-11-24 18:40:15] 2025-11-24 23:39:42,590 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 18:40:15] 2025-11-24 23:39:42,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 18:40:15] 2025-11-24 23:39:42,613 | INFO     | fitting pss+swap vs Time
[2025-11-24 18:40:15] 2025-11-24 23:39:42,615 | INFO     | sum of square deviations: 638139277264.0365
[2025-11-24 18:40:15] 2025-11-24 23:39:42,664 | INFO     | sum of deviations: 4589263773132.618
[2025-11-24 18:40:15] 2025-11-24 23:39:42,664 | INFO     | mean x: 1763988771.6941824
[2025-11-24 18:40:15] 2025-11-24 23:39:42,664 | INFO     | mean y: 2910195.6108490564
[2025-11-24 18:40:15] 2025-11-24 23:39:42,664 | INFO     | intersect: -12683050463.098549
[2025-11-24 18:40:15] 2025-11-24 23:39:42,666 | INFO     | chi2: 9.859536559082818
[2025-11-24 18:40:15] 2025-11-24 23:39:42,667 | INFO     | sum of square deviations: 630644025154.8702
[2025-11-24 18:40:15] 2025-11-24 23:39:42,703 | INFO     | sum of deviations: 5018092421437.489
[2025-11-24 18:40:15] 2025-11-24 23:39:42,704 | INFO     | mean x: 1763988619.2028413
[2025-11-24 18:40:15] 2025-11-24 23:39:42,704 | INFO     | mean y: 2918919.4727703235
[2025-11-24 18:40:15] 2025-11-24 23:39:42,704 | INFO     | intersect: -14033300514.065771
[2025-11-24 18:40:15] 2025-11-24 23:39:42,706 | INFO     | chi2: 6.71673110331066
[2025-11-24 18:40:15] 2025-11-24 23:39:42,706 | INFO     | current chi2=6.71673110331066 (change=31.875792913176408 %)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,707 | INFO     | sum of square deviations: 623207704383.0112
[2025-11-24 18:40:15] 2025-11-24 23:39:42,743 | INFO     | sum of deviations: 5276690639168.909
[2025-11-24 18:40:15] 2025-11-24 23:39:42,744 | INFO     | mean x: 1763988466.7115688
[2025-11-24 18:40:15] 2025-11-24 23:39:42,744 | INFO     | mean y: 2924217.1014263076
[2025-11-24 18:40:15] 2025-11-24 23:39:42,744 | INFO     | intersect: -14932740673.489088
[2025-11-24 18:40:15] 2025-11-24 23:39:42,745 | INFO     | chi2: 5.16932221252848
[2025-11-24 18:40:15] 2025-11-24 23:39:42,746 | INFO     | current chi2=5.16932221252848 (change=23.038124751182394 %)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,746 | INFO     | right removable region: 1261
[2025-11-24 18:40:15] 2025-11-24 23:39:42,747 | INFO     | sum of square deviations: 630642322644.8698
[2025-11-24 18:40:15] 2025-11-24 23:39:42,784 | INFO     | sum of deviations: 4085482919552.88
[2025-11-24 18:40:15] 2025-11-24 23:39:42,784 | INFO     | mean x: 1763988924.2028413
[2025-11-24 18:40:15] 2025-11-24 23:39:42,785 | INFO     | mean y: 2920442.588003157
[2025-11-24 18:40:15] 2025-11-24 23:39:42,785 | INFO     | intersect: -11424708755.98303
[2025-11-24 18:40:15] 2025-11-24 23:39:42,786 | INFO     | chi2: 5.958832430862358
[2025-11-24 18:40:15] 2025-11-24 23:39:42,786 | INFO     | current chi2=5.958832430862358 (change=39.56275332867493 %)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,788 | INFO     | sum of square deviations: 623204685071.1063
[2025-11-24 18:40:15] 2025-11-24 23:39:42,824 | INFO     | sum of deviations: 3852450952869.1
[2025-11-24 18:40:15] 2025-11-24 23:39:42,824 | INFO     | mean x: 1763989076.707607
[2025-11-24 18:40:15] 2025-11-24 23:39:42,824 | INFO     | mean y: 2925215.656101426
[2025-11-24 18:40:15] 2025-11-24 23:39:42,825 | INFO     | intersect: -10901487992.722672
[2025-11-24 18:40:15] 2025-11-24 23:39:42,826 | INFO     | chi2: 5.084649680355788
[2025-11-24 18:40:15] 2025-11-24 23:39:42,826 | INFO     | current chi2=5.084649680355788 (change=14.670369751949188 %)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,826 | INFO     | left removable region: 20
[2025-11-24 18:40:15] 2025-11-24 23:39:42,828 | INFO     | sum of square deviations: 592608541463.007
[2025-11-24 18:40:15] 2025-11-24 23:39:42,865 | INFO     | sum of deviations: 4326461360676.4824
[2025-11-24 18:40:15] 2025-11-24 23:39:42,865 | INFO     | mean x: 1763989046.2288477
[2025-11-24 18:40:15] 2025-11-24 23:39:42,865 | INFO     | mean y: 2944243.332796132
[2025-11-24 18:40:15] 2025-11-24 23:39:42,866 | INFO     | intersect: -12875423034.878431
[2025-11-24 18:40:15] 2025-11-24 23:39:42,867 | INFO     | chi2: 0.19586490189063527
[2025-11-24 18:40:15] 2025-11-24 23:39:42,868 | INFO     | current memory leak: 7.30 B/s (using 1241 data points, chi2=0.20)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,869 | INFO     | could have reported an average CPU frequency of 2600 MHz (46 samples)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,869 | INFO     | ..............................
[2025-11-24 18:40:15] 2025-11-24 23:39:42,869 | INFO     | . Timing measurements:
[2025-11-24 18:40:15] 2025-11-24 23:39:42,869 | INFO     | . get job = 0 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,869 | INFO     | . initial setup = 4 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,869 | INFO     | . payload setup = 35 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,870 | INFO     | . stage-in = 0 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,870 | INFO     | . payload execution = 77582 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,870 | INFO     | . stage-out = 5 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,870 | INFO     | . log creation = 1 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,870 | INFO     | ..............................
[2025-11-24 18:40:15] 2025-11-24 23:39:42,976 | INFO     | 
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | job summary report
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | --------------------------------------------------
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | PanDA job id: 6895338555
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | task id: 47556137
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | errors: (none)
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | pilot state: finished 
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | transexitcode: 0
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | exeerrorcode: 0
[2025-11-24 18:40:15] 2025-11-24 23:39:42,977 | INFO     | exeerrordiag: 
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | exitcode: 0
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | exitmsg: OK
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | cpuconsumptiontime: 302248 s
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | nevents: 1000
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | neventsw: 0
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | pid: 3512611
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | pgrp: 3512611
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | corecount: 8
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | event service: False
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | sizes: {0: 2297928, 1: 2298613, 2: 2298641, 3: 2298812, 14: 2298840, 25: 2298868, 28: 2299286, 36: 2299314, 77621: 2360173, 77627: 2369958, 77630: 2370014, 77640: 
[2025-11-24 18:40:15] 2025-11-24 23:39:42,978 | INFO     | --------------------------------------------------
[2025-11-24 18:40:15] 2025-11-24 23:39:42,979 | INFO     | 
[2025-11-24 18:40:15] 2025-11-24 23:39:42,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 18:40:15] 2025-11-24 23:39:42,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,000 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,000 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,000 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,000 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 18:40:15] 2025-11-24 23:39:43,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 18:40:15] 2025-11-24 23:39:43,002 | INFO     | job 6895338555 has completed (purged errors)
[2025-11-24 18:40:15] 2025-11-24 23:39:43,002 | INFO     | overall cleanup function is called
[2025-11-24 18:40:15] 2025-11-24 23:39:44,019 | INFO     | --- collectZombieJob: --- 10, [3512611]
[2025-11-24 18:40:15] 2025-11-24 23:39:44,019 | INFO     | zombie collector waiting for pid 3512611
[2025-11-24 18:40:15] 2025-11-24 23:39:44,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 18:40:15] 2025-11-24 23:39:44,019 | INFO     | collected zombie processes
[2025-11-24 18:40:15] 2025-11-24 23:39:44,019 | INFO     | will attempt to kill all subprocesses of pid=3512611
[2025-11-24 18:40:15] 2025-11-24 23:39:44,566 | INFO     | process IDs to be killed: [3512611] (in reverse order)
[2025-11-24 18:40:15] 2025-11-24 23:39:44,711 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 18:40:15] 2025-11-24 23:39:44,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 18:40:15] 2025-11-24 23:39:44,730 | INFO     | did not find any defunct processes belonging to 3512611
[2025-11-24 18:40:15] 2025-11-24 23:39:44,749 | INFO     | did not find any defunct processes belonging to 3512611
[2025-11-24 18:40:15] 2025-11-24 23:39:44,750 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 18:40:15] 2025-11-24 23:39:44,751 | INFO     | ready for new job
[2025-11-24 18:40:15] 2025-11-24 23:39:44,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 18:40:15] 2025-11-24 23:39:44,756 | INFO     | ***************************************
[2025-11-24 18:40:15] 2025-11-24 23:39:44,758 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:40:15] 2025-11-24 23:39:44,758 | INFO     | ***************************************
[2025-11-24 18:40:15] 2025-11-24 23:39:44,758 | INFO     | 
[2025-11-24 18:40:15] 2025-11-24 23:39:44,760 | INFO     | architecture information:
[2025-11-24 18:40:15] 2025-11-24 23:39:44,761 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:40:15] 2025-11-24 23:39:44,782 | INFO     | cat /etc/os-release:
[2025-11-24 18:40:15] NAME="CentOS Linux"
[2025-11-24 18:40:15] VERSION="7 (Core)"
[2025-11-24 18:40:15] ID="centos"
[2025-11-24 18:40:15] ID_LIKE="rhel fedora"
[2025-11-24 18:40:15] VERSION_ID="7"
[2025-11-24 18:40:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:40:15] ANSI_COLOR="0;31"
[2025-11-24 18:40:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:40:15] HOME_URL="https://www.centos.org/"
[2025-11-24 18:40:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:40:15] 
[2025-11-24 18:40:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:40:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:40:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:40:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:40:15] 
[2025-11-24 18:40:15] 2025-11-24 23:39:44,782 | INFO     | ***************************************
[2025-11-24 18:40:15] 2025-11-24 23:39:45,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 18:40:15] 2025-11-24 23:39:45,321 | INFO     | sufficient remaining disk space (72367472640 B)
[2025-11-24 18:40:15] 2025-11-24 23:39:45,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:40:15] 2025-11-24 23:39:45,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:40:15] 2025-11-24 23:39:45,322 | INFO     | update_server=False
[2025-11-24 18:40:15] 2025-11-24 23:39:45,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:40:15] 2025-11-24 23:39:45,431 | INFO     | all job control threads have been joined
[2025-11-24 18:40:15] 2025-11-24 23:39:45,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:40:15] 2025-11-24 23:39:45,933 | INFO     | all data control threads have been joined
[2025-11-24 18:40:15] 2025-11-24 23:39:45,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:40:15] 2025-11-24 23:39:45,936 | INFO     | aborting loop
[2025-11-24 18:40:15] 2025-11-24 23:39:46,328 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,400 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,418 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,437 | INFO     | [job] control thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,459 | INFO     | [job] validate thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,561 | INFO     | all payload control threads have been joined
[2025-11-24 18:40:15] 2025-11-24 23:39:46,714 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,799 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,938 | INFO     | [data] control thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:46,943 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:47,084 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:47,344 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:47,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:47,500 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:47,567 | INFO     | [payload] control thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:47,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:40:15] 2025-11-24 23:39:48,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:40:15] 2025-11-24 23:39:49,000 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:39:52,147 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:40:15] 2025-11-24 23:40:00,641 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:40:15] 2025-11-24 23:40:01,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383471433536)>', '<ExcThread(monitor, started 140382599894784)>']
[2025-11-24 18:40:15] 2025-11-24 23:40:06,517 | INFO     | all workflow threads have been joined
[2025-11-24 18:40:15] 2025-11-24 23:40:06,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:40:15] 2025-11-24 23:40:06,517 | INFO     | traces error code: 0
[2025-11-24 18:40:15] 2025-11-24 23:40:06,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:40:15] 2025-11-24 23:40:15,350 | INFO     | PID=3501997 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 18:40:15] 2025-11-24 23:40:15,350 | INFO     | .. there are 41 such processes running
[2025-11-24 18:40:15] 2025-11-24 23:40:15,352 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:40:15] 2025-11-24 23:40:15,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:40:15] 2025-11-24 23:40:15,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:40:15] 2025-11-24 23:40:15,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:40:15] 2025-11-24 23:40:15,352 | INFO     | [monitor] control thread has ended
[2025-11-24 18:40:15] 2025-11-24 23:40:15,518 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:40:15] 2025-11-24 23:40:15,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:40:15] 2025-11-24 23:40:15,523 [wrapper] pilotpid: 3501997
[2025-11-24 18:40:15] 2025-11-24 23:40:15,526 [wrapper] Pilot exit status: 0
[2025-11-24 18:40:15] 2025-11-24 23:40:15,541 [wrapper] pandaids: 6895338555
[2025-11-24 18:40:15] 2025-11-24 23:40:15,640 [wrapper] cleanup supervisor_pilot 3948772 3501998
[2025-11-24 18:40:15] 2025-11-24 23:40:15,643 [wrapper] Test setup, not cleaning
[2025-11-24 18:40:15] 2025-11-24 23:40:15,647 [wrapper] apfmon messages muted
[2025-11-24 18:40:15] 2025-11-24 23:40:15,649 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:40:15] 2025-11-24 23:40:15,652 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:40:15]  *** Error codes and diagnostics ***
[2025-11-24 18:40:15]     "exeErrorCode": 0,
[2025-11-24 18:40:15]     "exeErrorDiag": "",
[2025-11-24 18:40:15]     "pilotErrorCode": 0,
[2025-11-24 18:40:15]     "pilotErrorDiag": "",
[2025-11-24 18:40:15]  *** Listing of results directory ***
[2025-11-24 18:40:15] total 1328048
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 04:26 pilot3.tar.gz
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 04:28 queuedata.json
[2025-11-24 18:40:15] -rwx------. 1 boincer umatlas     36292 Nov 22 04:29 runpilot2-wrapper.sh
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas       100 Nov 23 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:40:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 21:03 run_atlas
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas       105 Nov 23 21:03 job.xml
[2025-11-24 18:40:15] -rw-r--r--. 2 boincer umatlas 408947330 Nov 23 21:03 EVNT.47483658._000330.pool.root.1
[2025-11-24 18:40:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:03 start_atlas.sh
[2025-11-24 18:40:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 21:03 shared
[2025-11-24 18:40:15] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 21:03 input.tar.gz
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas         0 Nov 23 21:03 boinc_lockfile
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 21:03 pandaJob.out
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas        57 Nov 23 21:03 setup.sh.local
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas    989786 Nov 23 21:04 agis_schedconf.cvmfs.json
[2025-11-24 18:40:15] drwx------. 5 boincer umatlas      4096 Nov 23 21:04 pilot3
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas       533 Nov 24 18:27 boinc_task_state.xml
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas      6659 Nov 24 18:37 init_data.xml
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas 922783243 Nov 24 18:38 HITS.47556137._003269.pool.root.1
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas      1087 Nov 24 18:39 memory_monitor_summary.json
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas   1516227 Nov 24 18:39 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas   2340250 Nov 24 18:39 log.47556137._003269.job.log.tgz.1
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas      8669 Nov 24 18:39 heartbeat.json
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 18:40 boinc_mmap_file
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas        29 Nov 24 18:40 wrapper_checkpoint.txt
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas        95 Nov 24 18:40 pilot_heartbeat.json
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas       823 Nov 24 18:40 pilotlog.txt
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas   9799810 Nov 24 18:40 log.47556137._003269.job.log.1
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas       353 Nov 24 18:40 output.list
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas       620 Nov 24 18:40 runtime_log
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas  12154880 Nov 24 18:40 result.tar.gz
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas      9328 Nov 24 18:40 runtime_log.err
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas       661 Nov 24 18:40 PpHODmH7yg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmL3HKDmEohScn.diag
[2025-11-24 18:40:15] -rw-r--r--. 1 boincer umatlas     21373 Nov 24 18:40 stderr.txt
[2025-11-24 18:40:15] HITS file was successfully produced:
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas 922783243 Nov 24 18:38 shared/HITS.pool.root.1
[2025-11-24 18:40:15]  *** Contents of shared directory: ***
[2025-11-24 18:40:15] total 1312996
[2025-11-24 18:40:15] -rw-r--r--. 2 boincer umatlas 408947330 Nov 23 21:03 ATLAS.root_0
[2025-11-24 18:40:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:03 start_atlas.sh
[2025-11-24 18:40:15] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 21:03 input.tar.gz
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas 922783243 Nov 24 18:38 HITS.pool.root.1
[2025-11-24 18:40:15] -rw-------. 1 boincer umatlas  12154880 Nov 24 18:40 result.tar.gz
18:40:17 (3497410): run_atlas exited; CPU time 305129.781623
18:40:17 (3497410): called boinc_finish(0)

</stderr_txt>
]]>

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