Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:38:22 (29064): wrapper (7.7.26015): starting
02:38:22 (29064): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 02:38:22] Arguments: --nthreads 8
[2025-11-23 02:38:22] Threads: 8
[2025-11-23 02:38:22] Checking for CVMFS
[2025-11-23 02:38:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 02:38:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 02:38:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 02:38:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 02:38:22] 2.11.2.0 16446 113054 134808 153201 0 98 15820696 18432001 1885 130560 0 80550433 99.973 4712820 30074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 02:38:22] CVMFS is ok
[2025-11-23 02:38:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 02:38:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 02:38:22] Further information can be found at the LHC@home message board.
[2025-11-23 02:38:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 02:38:22] Checking for apptainer binary...
[2025-11-23 02:38:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 02:38:22] Running /usr/bin/apptainer --version
[2025-11-23 02:38:22] apptainer version 1.3.2-1.el7
[2025-11-23 02:38:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 02:38:23] c-206-26.aglt2.org
[2025-11-23 02:38:23] apptainer works
[2025-11-23 02:38:23] Set ATHENA_PROC_NUMBER=8
[2025-11-23 02:38:23] Set ATHENA_CORE_NUMBER=8
[2025-11-23 02:38:23] Starting ATLAS job with PandaID=6895338548
[2025-11-23 02:38:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:16:37]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:16:37] 2025-11-24 03:15:51,711 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:16:37] 2025-11-24 03:15:51,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:16:37] 2025-11-24 03:15:51,735 | INFO     | fitting pss+swap vs Time
[2025-11-23 22:16:37] 2025-11-24 03:15:51,737 | INFO     | sum of square deviations: 481508889857.2063
[2025-11-23 22:16:37] 2025-11-24 03:15:51,783 | INFO     | sum of deviations: 1993150942042.5938
[2025-11-23 22:16:37] 2025-11-24 03:15:51,784 | INFO     | mean x: 1763918830.082038
[2025-11-23 22:16:37] 2025-11-24 03:15:51,784 | INFO     | mean y: 2908934.7832469777
[2025-11-23 22:16:37] 2025-11-24 03:15:51,784 | INFO     | intersect: -7298631186.121473
[2025-11-23 22:16:37] 2025-11-24 03:15:51,786 | INFO     | chi2: 6.592670168077259
[2025-11-23 22:16:37] 2025-11-24 03:15:51,788 | INFO     | sum of square deviations: 475298830148.0052
[2025-11-23 22:16:37] 2025-11-24 03:15:51,834 | INFO     | sum of deviations: 2366288861295.1245
[2025-11-23 22:16:37] 2025-11-24 03:15:51,834 | INFO     | mean x: 1763918677.584562
[2025-11-23 22:16:37] 2025-11-24 03:15:51,835 | INFO     | mean y: 2918094.0858629663
[2025-11-23 22:16:37] 2025-11-24 03:15:51,835 | INFO     | intersect: -8778801645.680874
[2025-11-23 22:16:37] 2025-11-24 03:15:51,837 | INFO     | chi2: 3.6306342265512215
[2025-11-23 22:16:37] 2025-11-24 03:15:51,837 | INFO     | current chi2=3.6306342265512215 (change=44.9292299782974 %)
[2025-11-23 22:16:37] 2025-11-24 03:15:51,839 | INFO     | sum of square deviations: 469142399351.289
[2025-11-23 22:16:37] 2025-11-24 03:15:51,885 | INFO     | sum of deviations: 2566339078857.0244
[2025-11-23 22:16:37] 2025-11-24 03:15:51,885 | INFO     | mean x: 1763918525.087108
[2025-11-23 22:16:37] 2025-11-24 03:15:51,885 | INFO     | mean y: 2923048.8597560977
[2025-11-23 22:16:37] 2025-11-24 03:15:51,886 | INFO     | intersect: -9646200648.146488
[2025-11-23 22:16:37] 2025-11-24 03:15:51,887 | INFO     | chi2: 2.71167108335861
[2025-11-23 22:16:37] 2025-11-24 03:15:51,888 | INFO     | current chi2=2.71167108335861 (change=25.311366715824313 %)
[2025-11-23 22:16:37] 2025-11-24 03:15:51,889 | INFO     | sum of square deviations: 463039364904.5581
[2025-11-23 22:16:37] 2025-11-24 03:15:51,935 | INFO     | sum of deviations: 2692059168411.581
[2025-11-23 22:16:37] 2025-11-24 03:15:51,936 | INFO     | mean x: 1763918372.5896764
[2025-11-23 22:16:37] 2025-11-24 03:15:51,936 | INFO     | mean y: 2926188.8967629047
[2025-11-23 22:16:37] 2025-11-24 03:15:51,936 | INFO     | intersect: -10252298284.811756
[2025-11-23 22:16:37] 2025-11-24 03:15:51,938 | INFO     | chi2: 2.2721516853417203
[2025-11-23 22:16:37] 2025-11-24 03:15:51,938 | INFO     | current chi2=2.2721516853417203 (change=16.208433268850282 %)
[2025-11-23 22:16:37] 2025-11-24 03:15:51,938 | INFO     | right removable region: 1142
[2025-11-23 22:16:37] 2025-11-24 03:15:51,940 | INFO     | sum of square deviations: 475298419008.0054
[2025-11-23 22:16:37] 2025-11-24 03:15:51,985 | INFO     | sum of deviations: 1691551265687.4368
[2025-11-23 22:16:37] 2025-11-24 03:15:51,986 | INFO     | mean x: 1763918982.584562
[2025-11-23 22:16:37] 2025-11-24 03:15:51,986 | INFO     | mean y: 2916332.3391153514
[2025-11-23 22:16:37] 2025-11-24 03:15:51,986 | INFO     | intersect: -6274738438.296165
[2025-11-23 22:16:37] 2025-11-24 03:15:51,988 | INFO     | chi2: 4.583403976576863
[2025-11-23 22:16:37] 2025-11-24 03:15:51,988 | INFO     | current chi2=4.583403976576863 (change=30.477274613700196 %)
[2025-11-23 22:16:37] 2025-11-24 03:15:51,990 | INFO     | sum of square deviations: 469141858647.97235
[2025-11-23 22:16:37] 2025-11-24 03:15:52,034 | INFO     | sum of deviations: 1620307330447.4158
[2025-11-23 22:16:37] 2025-11-24 03:15:52,034 | INFO     | mean x: 1763919135.0836236
[2025-11-23 22:16:37] 2025-11-24 03:15:52,035 | INFO     | mean y: 2918096.7665505228
[2025-11-23 22:16:37] 2025-11-24 03:15:52,035 | INFO     | intersect: -6089250086.923647
[2025-11-23 22:16:37] 2025-11-24 03:15:52,037 | INFO     | chi2: 4.53936017726369
[2025-11-23 22:16:37] 2025-11-24 03:15:52,037 | INFO     | current chi2=4.53936017726369 (change=0.9609408103290668 %)
[2025-11-23 22:16:37] 2025-11-24 03:15:52,037 | INFO     | left removable region: 20
[2025-11-23 22:16:37] 2025-11-24 03:15:52,038 | INFO     | sum of square deviations: 437983442238.36053
[2025-11-23 22:16:37] 2025-11-24 03:15:52,061 | INFO     | sum of deviations: 2226049111285.029
[2025-11-23 22:16:37] 2025-11-24 03:15:52,062 | INFO     | mean x: 1763918952.0926917
[2025-11-23 22:16:37] 2025-11-24 03:15:52,062 | INFO     | mean y: 2938432.893939394
[2025-11-23 22:16:37] 2025-11-24 03:15:52,062 | INFO     | intersect: -8962172658.104397
[2025-11-23 22:16:37] 2025-11-24 03:15:52,063 | INFO     | chi2: 0.1698270256866124
[2025-11-23 22:16:37] 2025-11-24 03:15:52,063 | INFO     | current memory leak: 5.08 B/s (using 1122 data points, chi2=0.17)
[2025-11-23 22:16:37] 2025-11-24 03:15:52,064 | INFO     | could have reported an average CPU frequency of 2627 MHz (42 samples)
[2025-11-23 22:16:37] 2025-11-24 03:15:52,064 | INFO     | ..............................
[2025-11-23 22:16:37] 2025-11-24 03:15:52,064 | INFO     | . Timing measurements:
[2025-11-23 22:16:37] 2025-11-24 03:15:52,064 | INFO     | . get job = 0 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,064 | INFO     | . initial setup = 2 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,064 | INFO     | . payload setup = 5 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,065 | INFO     | . stage-in = 0 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,065 | INFO     | . payload execution = 70600 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,065 | INFO     | . stage-out = 3 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,065 | INFO     | . log creation = 0 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,065 | INFO     | ..............................
[2025-11-23 22:16:37] 2025-11-24 03:15:52,217 | INFO     | 
[2025-11-23 22:16:37] 2025-11-24 03:15:52,217 | INFO     | job summary report
[2025-11-23 22:16:37] 2025-11-24 03:15:52,217 | INFO     | --------------------------------------------------
[2025-11-23 22:16:37] 2025-11-24 03:15:52,217 | INFO     | PanDA job id: 6895338548
[2025-11-23 22:16:37] 2025-11-24 03:15:52,217 | INFO     | task id: 47556137
[2025-11-23 22:16:37] 2025-11-24 03:15:52,218 | INFO     | errors: (none)
[2025-11-23 22:16:37] 2025-11-24 03:15:52,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:16:37] 2025-11-24 03:15:52,218 | INFO     | pilot state: finished 
[2025-11-23 22:16:37] 2025-11-24 03:15:52,218 | INFO     | transexitcode: 0
[2025-11-23 22:16:37] 2025-11-24 03:15:52,218 | INFO     | exeerrorcode: 0
[2025-11-23 22:16:37] 2025-11-24 03:15:52,218 | INFO     | exeerrordiag: 
[2025-11-23 22:16:37] 2025-11-24 03:15:52,219 | INFO     | exitcode: 0
[2025-11-23 22:16:37] 2025-11-24 03:15:52,219 | INFO     | exitmsg: OK
[2025-11-23 22:16:37] 2025-11-24 03:15:52,219 | INFO     | cpuconsumptiontime: 544465 s
[2025-11-23 22:16:37] 2025-11-24 03:15:52,219 | INFO     | nevents: 1000
[2025-11-23 22:16:37] 2025-11-24 03:15:52,219 | INFO     | neventsw: 0
[2025-11-23 22:16:37] 2025-11-24 03:15:52,219 | INFO     | pid: 7064
[2025-11-23 22:16:37] 2025-11-24 03:15:52,220 | INFO     | pgrp: 7064
[2025-11-23 22:16:37] 2025-11-24 03:15:52,220 | INFO     | corecount: 8
[2025-11-23 22:16:37] 2025-11-24 03:15:52,220 | INFO     | event service: False
[2025-11-23 22:16:37] 2025-11-24 03:15:52,220 | INFO     | sizes: {0: 2298584, 1: 2298783, 5: 2299045, 12: 2299101, 70609: 2355814, 70613: 2364808, 70614: 2364992, 70621: 2365238}
[2025-11-23 22:16:37] 2025-11-24 03:15:52,220 | INFO     | --------------------------------------------------
[2025-11-23 22:16:37] 2025-11-24 03:15:52,220 | INFO     | 
[2025-11-23 22:16:37] 2025-11-24 03:15:52,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 22:16:37] 2025-11-24 03:15:52,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:16:37] 2025-11-24 03:15:52,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:16:37] 2025-11-24 03:15:52,241 | INFO     | job 6895338548 has completed (purged errors)
[2025-11-23 22:16:37] 2025-11-24 03:15:52,241 | INFO     | overall cleanup function is called
[2025-11-23 22:16:37] 2025-11-24 03:15:53,252 | INFO     | --- collectZombieJob: --- 10, [7064]
[2025-11-23 22:16:37] 2025-11-24 03:15:53,253 | INFO     | zombie collector waiting for pid 7064
[2025-11-23 22:16:37] 2025-11-24 03:15:53,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:16:37] 2025-11-24 03:15:53,253 | INFO     | collected zombie processes
[2025-11-23 22:16:37] 2025-11-24 03:15:53,253 | INFO     | will attempt to kill all subprocesses of pid=7064
[2025-11-23 22:16:37] 2025-11-24 03:15:53,383 | INFO     | process IDs to be killed: [7064] (in reverse order)
[2025-11-23 22:16:37] 2025-11-24 03:15:53,437 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:16:37] 2025-11-24 03:15:53,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:16:37] 2025-11-24 03:15:53,443 | INFO     | did not find any defunct processes belonging to 7064
[2025-11-23 22:16:37] 2025-11-24 03:15:53,445 | INFO     | did not find any defunct processes belonging to 7064
[2025-11-23 22:16:37] 2025-11-24 03:15:53,447 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:16:37] 2025-11-24 03:15:53,447 | INFO     | ready for new job
[2025-11-23 22:16:37] 2025-11-24 03:15:53,447 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:16:37] 2025-11-24 03:15:53,451 | INFO     | ***************************************
[2025-11-23 22:16:37] 2025-11-24 03:15:53,451 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:16:37] 2025-11-24 03:15:53,451 | INFO     | ***************************************
[2025-11-23 22:16:37] 2025-11-24 03:15:53,452 | INFO     | 
[2025-11-23 22:16:37] 2025-11-24 03:15:53,452 | INFO     | architecture information:
[2025-11-23 22:16:37] 2025-11-24 03:15:53,453 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:16:37] 2025-11-24 03:15:53,465 | INFO     | cat /etc/os-release:
[2025-11-23 22:16:37] NAME="CentOS Linux"
[2025-11-23 22:16:37] VERSION="7 (Core)"
[2025-11-23 22:16:37] ID="centos"
[2025-11-23 22:16:37] ID_LIKE="rhel fedora"
[2025-11-23 22:16:37] VERSION_ID="7"
[2025-11-23 22:16:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:16:37] ANSI_COLOR="0;31"
[2025-11-23 22:16:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:16:37] HOME_URL="https://www.centos.org/"
[2025-11-23 22:16:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:16:37] 
[2025-11-23 22:16:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:16:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:16:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:16:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:16:37] 
[2025-11-23 22:16:37] 2025-11-24 03:15:53,465 | INFO     | ***************************************
[2025-11-23 22:16:37] 2025-11-24 03:15:53,968 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 22:16:37] 2025-11-24 03:15:54,004 | INFO     | sufficient remaining disk space (25855787008 B)
[2025-11-23 22:16:37] 2025-11-24 03:15:54,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:16:37] 2025-11-24 03:15:54,004 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:16:37] 2025-11-24 03:15:54,005 | INFO     | update_server=False
[2025-11-23 22:16:37] 2025-11-24 03:15:54,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:16:37] 2025-11-24 03:15:54,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:16:37] 2025-11-24 03:15:54,041 | INFO     | all job control threads have been joined
[2025-11-23 22:16:37] 2025-11-24 03:15:54,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:16:37] 2025-11-24 03:15:54,220 | INFO     | aborting loop
[2025-11-23 22:16:37] 2025-11-24 03:15:54,352 | INFO     | all data control threads have been joined
[2025-11-23 22:16:37] 2025-11-24 03:15:54,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:16:37] 2025-11-24 03:15:54,936 | INFO     | all payload control threads have been joined
[2025-11-23 22:16:37] 2025-11-24 03:15:55,010 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,011 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,047 | INFO     | [job] control thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,227 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,359 | INFO     | [data] control thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,529 | INFO     | [job] validate thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,795 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,799 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:16:37] 2025-11-24 03:15:55,941 | INFO     | [payload] control thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:55,998 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:56,008 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:56,024 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:56,336 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:56,847 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:15:59,852 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:16:37] 2025-11-24 03:16:23,632 | INFO     | PID=314 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-23 22:16:37] 2025-11-24 03:16:23,632 | INFO     | .. there are 3 such processes running
[2025-11-23 22:16:37] 2025-11-24 03:16:23,633 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:16:37] 2025-11-24 03:16:23,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:16:37] 2025-11-24 03:16:23,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:16:37] 2025-11-24 03:16:31,278 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:16:37] 2025-11-24 03:16:32,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800225277760)>', '<ExcThread(monitor, started 139799566477056)>']
[2025-11-23 22:16:37] 2025-11-24 03:16:32,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:16:37] 2025-11-24 03:16:32,685 | INFO     | [monitor] control thread has ended
[2025-11-23 22:16:37] 2025-11-24 03:16:37,427 | INFO     | all workflow threads have been joined
[2025-11-23 22:16:37] 2025-11-24 03:16:37,427 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:16:37] 2025-11-24 03:16:37,427 | INFO     | traces error code: 0
[2025-11-23 22:16:37] 2025-11-24 03:16:37,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:16:37] 2025-11-24 03:16:37,555 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:16:37] 2025-11-24 03:16:37,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:16:37] 2025-11-24 03:16:37,564 [wrapper] pilotpid: 314
[2025-11-23 22:16:37] 2025-11-24 03:16:37,566 [wrapper] Pilot exit status: 0
[2025-11-23 22:16:37] 2025-11-24 03:16:37,576 [wrapper] pandaids: 6895338548
[2025-11-23 22:16:37] 2025-11-24 03:16:37,607 [wrapper] cleanup supervisor_pilot  7927 315
[2025-11-23 22:16:37] 2025-11-24 03:16:37,610 [wrapper] Test setup, not cleaning
[2025-11-23 22:16:37] 2025-11-24 03:16:37,612 [wrapper] apfmon messages muted
[2025-11-23 22:16:37] 2025-11-24 03:16:37,615 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:16:37] 2025-11-24 03:16:37,617 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:16:37]  *** Error codes and diagnostics ***
[2025-11-23 22:16:37]     "exeErrorCode": 0,
[2025-11-23 22:16:37]     "exeErrorDiag": "",
[2025-11-23 22:16:37]     "pilotErrorCode": 0,
[2025-11-23 22:16:37]     "pilotErrorDiag": "",
[2025-11-23 22:16:37]  *** Listing of results directory ***
[2025-11-23 22:16:37] total 1332564
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 04:26 pilot3.tar.gz
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 04:28 queuedata.json
[2025-11-23 22:16:37] -rwx------ 1 boincer umatlas     36292 Nov 22 04:31 runpilot2-wrapper.sh
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas       100 Nov 23 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:16:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 02:38 run_atlas
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas       105 Nov 23 02:38 job.xml
[2025-11-23 22:16:37] -rw-r--r-- 2 boincer umatlas 408947330 Nov 23 02:38 EVNT.47483658._000330.pool.root.1
[2025-11-23 22:16:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:38 start_atlas.sh
[2025-11-23 22:16:37] drwxrwx--x 2 boincer umatlas      4096 Nov 23 02:38 shared
[2025-11-23 22:16:37] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 02:38 input.tar.gz
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas         0 Nov 23 02:38 boinc_lockfile
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 02:38 pandaJob.out
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas        57 Nov 23 02:38 setup.sh.local
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas    989784 Nov 23 02:38 agis_schedconf.cvmfs.json
[2025-11-23 22:16:37] drwx------ 5 boincer umatlas      4096 Nov 23 02:38 pilot3
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas       533 Nov 23 21:58 boinc_task_state.xml
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas      5954 Nov 23 22:10 init_data.xml
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas 927548622 Nov 23 22:15 HITS.47556137._003262.pool.root.1
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas      1067 Nov 23 22:15 memory_monitor_summary.json
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas        95 Nov 23 22:15 pilot_heartbeat.json
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas   1526164 Nov 23 22:15 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas   2316937 Nov 23 22:15 log.47556137._003262.job.log.tgz.1
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas      8674 Nov 23 22:15 heartbeat.json
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas        29 Nov 23 22:16 wrapper_checkpoint.txt
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 22:16 boinc_mmap_file
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas      4819 Nov 23 22:16 pilotlog.txt
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas   9747095 Nov 23 22:16 log.47556137._003262.job.log.1
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas       353 Nov 23 22:16 output.list
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas       620 Nov 23 22:16 runtime_log
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas  12083200 Nov 23 22:16 result.tar.gz
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 22:16 runtime_log.err
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas       668 Nov 23 22:16 7jdMDmW8yg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN5JKDm9AmRrn.diag
[2025-11-23 22:16:37] -rw-r--r-- 1 boincer umatlas     21084 Nov 23 22:16 stderr.txt
[2025-11-23 22:16:37] HITS file was successfully produced:
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas 927548622 Nov 23 22:15 shared/HITS.pool.root.1
[2025-11-23 22:16:37]  *** Contents of shared directory: ***
[2025-11-23 22:16:37] total 1317576
[2025-11-23 22:16:37] -rw-r--r-- 2 boincer umatlas 408947330 Nov 23 02:38 ATLAS.root_0
[2025-11-23 22:16:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:38 start_atlas.sh
[2025-11-23 22:16:37] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 02:38 input.tar.gz
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas 927548622 Nov 23 22:15 HITS.pool.root.1
[2025-11-23 22:16:37] -rw------- 1 boincer umatlas  12083200 Nov 23 22:16 result.tar.gz
22:16:39 (29064): run_atlas exited; CPU time 543394.819972
22:16:39 (29064): called boinc_finish(0)

</stderr_txt>
]]>

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