Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:33:24 (12852): wrapper (7.7.26015): starting
02:33:24 (12852): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 02:33:24] Arguments: --nthreads 8
[2025-11-23 02:33:24] Threads: 8
[2025-11-23 02:33:24] Checking for CVMFS
[2025-11-23 02:33:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 02:33:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 02:33:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 02:33:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 02:33:24] 2.11.2.0 31887 1773 63072 153201 0 82 15855679 20275201 1 130560 0 632443 99.981 61979 38664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 02:33:24] CVMFS is ok
[2025-11-23 02:33:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 02:33:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 02:33:24] Further information can be found at the LHC@home message board.
[2025-11-23 02:33:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 02:33:24] Checking for apptainer binary...
[2025-11-23 02:33:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 02:33:24] Running /usr/bin/apptainer --version
[2025-11-23 02:33:24] apptainer version 1.3.2-1.el7
[2025-11-23 02:33:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 02:33:26] c-204-12.aglt2.org
[2025-11-23 02:33:26] apptainer works
[2025-11-23 02:33:26] Set ATHENA_PROC_NUMBER=8
[2025-11-23 02:33:26] Set ATHENA_CORE_NUMBER=8
[2025-11-23 02:33:26] Starting ATLAS job with PandaID=6895338458
[2025-11-23 02:33:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:37:08]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:37:08] 2025-11-23 20:36:20,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,311 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 15:37:08] 2025-11-23 20:36:20,314 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-23 15:37:08] 2025-11-23 20:36:20,316 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895338458/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,317 | INFO     | extracted standard info from prmon json
[2025-11-23 15:37:08] 2025-11-23 20:36:20,317 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:37:08] 2025-11-23 20:36:20,317 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:37:08] 2025-11-23 20:36:20,331 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:37:08] 2025-11-23 20:36:20,332 | INFO     | sum of square deviations: 141012474085.0329
[2025-11-23 15:37:08] 2025-11-23 20:36:20,332 | INFO     | time since job start (46957s) is within the limit (172800.0s)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,345 | INFO     | sum of deviations: 878798835663.4453
[2025-11-23 15:37:08] 2025-11-23 20:36:20,345 | INFO     | mean x: 1763906680.596879
[2025-11-23 15:37:08] 2025-11-23 20:36:20,345 | INFO     | mean y: 2881455.6853055917
[2025-11-23 15:37:08] 2025-11-23 20:36:20,345 | INFO     | intersect: -10989898773.053623
[2025-11-23 15:37:08] 2025-11-23 20:36:20,346 | INFO     | chi2: 5.608106357256943
[2025-11-23 15:37:08] 2025-11-23 20:36:20,347 | INFO     | sum of square deviations: 138279893073.23947
[2025-11-23 15:37:08] 2025-11-23 20:36:20,359 | INFO     | sum of deviations: 1117498003090.2551
[2025-11-23 15:37:08] 2025-11-23 20:36:20,359 | INFO     | mean x: 1763906528.1007853
[2025-11-23 15:37:08] 2025-11-23 20:36:20,360 | INFO     | mean y: 2894772.2434554975
[2025-11-23 15:37:08] 2025-11-23 20:36:20,360 | INFO     | intersect: -14251976120.276495
[2025-11-23 15:37:08] 2025-11-23 20:36:20,361 | INFO     | chi2: 2.8222490138875687
[2025-11-23 15:37:08] 2025-11-23 20:36:20,361 | INFO     | current chi2=2.8222490138875687 (change=49.67554404107277 %)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,362 | INFO     | sum of square deviations: 135582847611.42282
[2025-11-23 15:37:08] 2025-11-23 20:36:20,380 | INFO     | sum of deviations: 1186536602804.3313
[2025-11-23 15:37:08] 2025-11-23 20:36:20,380 | INFO     | mean x: 1763906375.604743
[2025-11-23 15:37:08] 2025-11-23 20:36:20,380 | INFO     | mean y: 2898669.5744400527
[2025-11-23 15:37:08] 2025-11-23 20:36:20,380 | INFO     | intersect: -15433710868.036592
[2025-11-23 15:37:08] 2025-11-23 20:36:20,381 | INFO     | chi2: 2.470136878753399
[2025-11-23 15:37:08] 2025-11-23 20:36:20,381 | INFO     | current chi2=2.470136878753399 (change=12.47629579819199 %)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,381 | INFO     | right removable region: 758
[2025-11-23 15:37:08] 2025-11-23 20:36:20,382 | INFO     | sum of square deviations: 138279613083.23947
[2025-11-23 15:37:08] 2025-11-23 20:36:20,405 | INFO     | sum of deviations: 667769538928.7126
[2025-11-23 15:37:08] 2025-11-23 20:36:20,405 | INFO     | mean x: 1763906833.1007853
[2025-11-23 15:37:08] 2025-11-23 20:36:20,405 | INFO     | mean y: 2893211.977748691
[2025-11-23 15:37:08] 2025-11-23 20:36:20,405 | INFO     | intersect: -8515233404.010631
[2025-11-23 15:37:08] 2025-11-23 20:36:20,406 | INFO     | chi2: 3.305778798490925
[2025-11-23 15:37:08] 2025-11-23 20:36:20,406 | INFO     | current chi2=3.305778798490925 (change=41.05356446720709 %)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,407 | INFO     | sum of square deviations: 135582334113.63075
[2025-11-23 15:37:08] 2025-11-23 20:36:20,430 | INFO     | sum of deviations: 621243429773.522
[2025-11-23 15:37:08] 2025-11-23 20:36:20,430 | INFO     | mean x: 1763906985.6034255
[2025-11-23 15:37:08] 2025-11-23 20:36:20,430 | INFO     | mean y: 2895841.2608695654
[2025-11-23 15:37:08] 2025-11-23 20:36:20,431 | INFO     | intersect: -8079393291.033828
[2025-11-23 15:37:08] 2025-11-23 20:36:20,431 | INFO     | chi2: 3.257926627423921
[2025-11-23 15:37:08] 2025-11-23 20:36:20,432 | INFO     | current chi2=3.257926627423921 (change=1.4475309445643558 %)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,432 | INFO     | left removable region: 20
[2025-11-23 15:37:08] 2025-11-23 20:36:20,432 | INFO     | sum of square deviations: 124637120057.97841
[2025-11-23 15:37:08] 2025-11-23 20:36:20,444 | INFO     | sum of deviations: 876794739906.0317
[2025-11-23 15:37:08] 2025-11-23 20:36:20,444 | INFO     | mean x: 1763906955.1165311
[2025-11-23 15:37:08] 2025-11-23 20:36:20,444 | INFO     | mean y: 2916643.325203252
[2025-11-23 15:37:08] 2025-11-23 20:36:20,444 | INFO     | intersect: -12405781016.010979
[2025-11-23 15:37:08] 2025-11-23 20:36:20,445 | INFO     | chi2: 0.08579538982544763
[2025-11-23 15:37:08] 2025-11-23 20:36:20,445 | INFO     | current memory leak: 7.03 B/s (using 738 data points, chi2=0.09)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,446 | INFO     | could have reported an average CPU frequency of 2175 MHz (29 samples)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,446 | INFO     | ..............................
[2025-11-23 15:37:08] 2025-11-23 20:36:20,446 | INFO     | . Timing measurements:
[2025-11-23 15:37:08] 2025-11-23 20:36:20,446 | INFO     | . get job = 0 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,446 | INFO     | . initial setup = 2 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,446 | INFO     | . payload setup = 8 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,447 | INFO     | . stage-in = 0 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,447 | INFO     | . payload execution = 46913 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,447 | INFO     | . stage-out = 3 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,447 | INFO     | . log creation = 0 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,447 | INFO     | ..............................
[2025-11-23 15:37:08] 2025-11-23 20:36:20,538 | INFO     | 
[2025-11-23 15:37:08] 2025-11-23 20:36:20,538 | INFO     | job summary report
[2025-11-23 15:37:08] 2025-11-23 20:36:20,538 | INFO     | --------------------------------------------------
[2025-11-23 15:37:08] 2025-11-23 20:36:20,539 | INFO     | PanDA job id: 6895338458
[2025-11-23 15:37:08] 2025-11-23 20:36:20,539 | INFO     | task id: 47556137
[2025-11-23 15:37:08] 2025-11-23 20:36:20,539 | INFO     | errors: (none)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,539 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:37:08] 2025-11-23 20:36:20,539 | INFO     | pilot state: finished 
[2025-11-23 15:37:08] 2025-11-23 20:36:20,540 | INFO     | transexitcode: 0
[2025-11-23 15:37:08] 2025-11-23 20:36:20,540 | INFO     | exeerrorcode: 0
[2025-11-23 15:37:08] 2025-11-23 20:36:20,540 | INFO     | exeerrordiag: 
[2025-11-23 15:37:08] 2025-11-23 20:36:20,540 | INFO     | exitcode: 0
[2025-11-23 15:37:08] 2025-11-23 20:36:20,540 | INFO     | exitmsg: OK
[2025-11-23 15:37:08] 2025-11-23 20:36:20,540 | INFO     | cpuconsumptiontime: 362601 s
[2025-11-23 15:37:08] 2025-11-23 20:36:20,541 | INFO     | nevents: 1000
[2025-11-23 15:37:08] 2025-11-23 20:36:20,541 | INFO     | neventsw: 0
[2025-11-23 15:37:08] 2025-11-23 20:36:20,541 | INFO     | pid: 23035
[2025-11-23 15:37:08] 2025-11-23 20:36:20,541 | INFO     | pgrp: 23035
[2025-11-23 15:37:08] 2025-11-23 20:36:20,541 | INFO     | corecount: 8
[2025-11-23 15:37:08] 2025-11-23 20:36:20,541 | INFO     | event service: False
[2025-11-23 15:37:08] 2025-11-23 20:36:20,542 | INFO     | sizes: {0: 2298755, 1: 2298755, 6: 2299045, 11: 2299073, 46926: 2345695, 46930: 2354689, 46931: 2354873, 46940: 2355119}
[2025-11-23 15:37:08] 2025-11-23 20:36:20,542 | INFO     | --------------------------------------------------
[2025-11-23 15:37:08] 2025-11-23 20:36:20,542 | INFO     | 
[2025-11-23 15:37:08] 2025-11-23 20:36:20,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 15:37:08] 2025-11-23 20:36:20,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,576 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,576 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:37:08] 2025-11-23 20:36:20,576 | INFO     | job 6895338458 has completed (purged errors)
[2025-11-23 15:37:08] 2025-11-23 20:36:20,577 | INFO     | overall cleanup function is called
[2025-11-23 15:37:08] 2025-11-23 20:36:21,593 | INFO     | --- collectZombieJob: --- 10, [23035]
[2025-11-23 15:37:08] 2025-11-23 20:36:21,593 | INFO     | zombie collector waiting for pid 23035
[2025-11-23 15:37:08] 2025-11-23 20:36:21,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:37:08] 2025-11-23 20:36:21,593 | INFO     | collected zombie processes
[2025-11-23 15:37:08] 2025-11-23 20:36:21,594 | INFO     | will attempt to kill all subprocesses of pid=23035
[2025-11-23 15:37:08] 2025-11-23 20:36:21,683 | INFO     | process IDs to be killed: [23035] (in reverse order)
[2025-11-23 15:37:08] 2025-11-23 20:36:21,741 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:37:08] 2025-11-23 20:36:21,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:37:08] 2025-11-23 20:36:21,746 | INFO     | did not find any defunct processes belonging to 23035
[2025-11-23 15:37:08] 2025-11-23 20:36:21,749 | INFO     | did not find any defunct processes belonging to 23035
[2025-11-23 15:37:08] 2025-11-23 20:36:21,751 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:37:08] 2025-11-23 20:36:21,751 | INFO     | ready for new job
[2025-11-23 15:37:08] 2025-11-23 20:36:21,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:37:08] 2025-11-23 20:36:21,755 | INFO     | ***************************************
[2025-11-23 15:37:08] 2025-11-23 20:36:21,755 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:37:08] 2025-11-23 20:36:21,755 | INFO     | ***************************************
[2025-11-23 15:37:08] 2025-11-23 20:36:21,755 | INFO     | 
[2025-11-23 15:37:08] 2025-11-23 20:36:21,756 | INFO     | architecture information:
[2025-11-23 15:37:08] 2025-11-23 20:36:21,756 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:37:08] 2025-11-23 20:36:21,774 | INFO     | cat /etc/os-release:
[2025-11-23 15:37:08] NAME="CentOS Linux"
[2025-11-23 15:37:08] VERSION="7 (Core)"
[2025-11-23 15:37:08] ID="centos"
[2025-11-23 15:37:08] ID_LIKE="rhel fedora"
[2025-11-23 15:37:08] VERSION_ID="7"
[2025-11-23 15:37:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:37:08] ANSI_COLOR="0;31"
[2025-11-23 15:37:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:37:08] HOME_URL="https://www.centos.org/"
[2025-11-23 15:37:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:37:08] 
[2025-11-23 15:37:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:37:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:37:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:37:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:37:08] 
[2025-11-23 15:37:08] 2025-11-23 20:36:21,775 | INFO     | ***************************************
[2025-11-23 15:37:08] 2025-11-23 20:36:22,278 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 15:37:08] 2025-11-23 20:36:22,299 | INFO     | sufficient remaining disk space (17442013184 B)
[2025-11-23 15:37:08] 2025-11-23 20:36:22,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:37:08] 2025-11-23 20:36:22,300 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:37:08] 2025-11-23 20:36:22,300 | INFO     | update_server=False
[2025-11-23 15:37:08] 2025-11-23 20:36:22,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:37:08] 2025-11-23 20:36:22,301 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-23 15:37:08] 2025-11-23 20:36:22,301 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:37:08] 2025-11-23 20:36:22,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:37:08] 2025-11-23 20:36:22,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:37:08] 2025-11-23 20:36:22,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:37:08] 2025-11-23 20:36:22,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:37:08] 2025-11-23 20:36:22,604 | INFO     | all payload control threads have been joined
[2025-11-23 15:37:08] 2025-11-23 20:36:22,794 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 15:37:08] 2025-11-23 20:36:22,794 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 15:37:08] 2025-11-23 20:36:22,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:37:08] 2025-11-23 20:36:22,794 | INFO     | will abort loop
[2025-11-23 15:37:08] 2025-11-23 20:36:22,969 | INFO     | all job control threads have been joined
[2025-11-23 15:37:08] 2025-11-23 20:36:23,252 | INFO     | all data control threads have been joined
[2025-11-23 15:37:08] 2025-11-23 20:36:23,306 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,308 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,444 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,610 | INFO     | [payload] control thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,621 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:37:08] 2025-11-23 20:36:23,800 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,954 | INFO     | [job] validate thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,959 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:23,974 | INFO     | [job] control thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:24,258 | INFO     | [data] control thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:24,378 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:24,572 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:24,583 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:24,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:25,759 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:36:26,309 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:37:08] 2025-11-23 20:37:01,064 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:37:08] 2025-11-23 20:37:02,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395536856896)>', '<ExcThread(monitor, started 140394822100736)>']
[2025-11-23 15:37:08] 2025-11-23 20:37:03,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:37:08] 2025-11-23 20:37:03,507 | INFO     | [monitor] control thread has ended
[2025-11-23 15:37:08] 2025-11-23 20:37:07,941 | INFO     | all workflow threads have been joined
[2025-11-23 15:37:08] 2025-11-23 20:37:07,941 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:37:08] 2025-11-23 20:37:07,941 | INFO     | traces error code: 0
[2025-11-23 15:37:08] 2025-11-23 20:37:07,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:37:08] 2025-11-23 20:37:08,054 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:37:08] 2025-11-23 20:37:08,059 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:37:08] 2025-11-23 20:37:08,063 [wrapper] pilotpid: 16616
[2025-11-23 15:37:08] 2025-11-23 20:37:08,068 [wrapper] Pilot exit status: 0
[2025-11-23 15:37:08] 2025-11-23 20:37:08,084 [wrapper] pandaids: 6895338458
[2025-11-23 15:37:08] 2025-11-23 20:37:08,132 [wrapper] cleanup supervisor_pilot 31287 16617
[2025-11-23 15:37:08] 2025-11-23 20:37:08,137 [wrapper] Test setup, not cleaning
[2025-11-23 15:37:08] 2025-11-23 20:37:08,142 [wrapper] apfmon messages muted
[2025-11-23 15:37:08] 2025-11-23 20:37:08,147 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:37:08] 2025-11-23 20:37:08,152 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:37:08]  *** Error codes and diagnostics ***
[2025-11-23 15:37:08]     "exeErrorCode": 0,
[2025-11-23 15:37:08]     "exeErrorDiag": "",
[2025-11-23 15:37:08]     "pilotErrorCode": 0,
[2025-11-23 15:37:08]     "pilotErrorDiag": "",
[2025-11-23 15:37:08]  *** Listing of results directory ***
[2025-11-23 15:37:08] total 1343948
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 04:00 pilot3.tar.gz
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 04:22 queuedata.json
[2025-11-23 15:37:08] -rwx------ 1 boincer umatlas     36292 Nov 22 04:23 runpilot2-wrapper.sh
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas       100 Nov 23 02:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:37:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 02:33 run_atlas
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas       105 Nov 23 02:33 job.xml
[2025-11-23 15:37:08] -rw-r--r-- 2 boincer umatlas 411939139 Nov 23 02:33 EVNT.47483658._000327.pool.root.1
[2025-11-23 15:37:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:33 start_atlas.sh
[2025-11-23 15:37:08] drwxrwx--x 2 boincer umatlas      4096 Nov 23 02:33 shared
[2025-11-23 15:37:08] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 02:33 input.tar.gz
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas         0 Nov 23 02:33 boinc_lockfile
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 02:33 pandaJob.out
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas        57 Nov 23 02:33 setup.sh.local
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas    989784 Nov 23 02:33 agis_schedconf.cvmfs.json
[2025-11-23 15:37:08] drwx------ 5 boincer umatlas      4096 Nov 23 02:33 pilot3
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas       533 Nov 23 15:24 boinc_task_state.xml
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas 943378326 Nov 23 15:35 HITS.47556137._003233.pool.root.1
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas      1064 Nov 23 15:36 memory_monitor_summary.json
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas   1526164 Nov 23 15:36 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas   2013345 Nov 23 15:36 log.47556137._003233.job.log.tgz.1
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas        95 Nov 23 15:36 pilot_heartbeat.json
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas      8656 Nov 23 15:36 heartbeat.json
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 15:36 init_data.xml
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 15:37 boinc_mmap_file
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas        29 Nov 23 15:37 wrapper_checkpoint.txt
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas      4738 Nov 23 15:37 pilotlog.txt
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas   6463742 Nov 23 15:37 log.47556137._003233.job.log.1
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas       353 Nov 23 15:37 output.list
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas       620 Nov 23 15:37 runtime_log
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas   8499200 Nov 23 15:37 result.tar.gz
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 15:37 runtime_log.err
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas       668 Nov 23 15:37 HozNDmL1yg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm84JKDmz5qmKo.diag
[2025-11-23 15:37:08] -rw-r--r-- 1 boincer umatlas     21222 Nov 23 15:37 stderr.txt
[2025-11-23 15:37:08] HITS file was successfully produced:
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas 943378326 Nov 23 15:35 shared/HITS.pool.root.1
[2025-11-23 15:37:08]  *** Contents of shared directory: ***
[2025-11-23 15:37:08] total 1332460
[2025-11-23 15:37:08] -rw-r--r-- 2 boincer umatlas 411939139 Nov 23 02:33 ATLAS.root_0
[2025-11-23 15:37:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:33 start_atlas.sh
[2025-11-23 15:37:08] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 02:33 input.tar.gz
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas 943378326 Nov 23 15:35 HITS.pool.root.1
[2025-11-23 15:37:08] -rw------- 1 boincer umatlas   8499200 Nov 23 15:37 result.tar.gz
15:37:09 (12852): run_atlas exited; CPU time 358416.550470
15:37:09 (12852): called boinc_finish(0)

</stderr_txt>
]]>

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