Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:15:41 (2430633): wrapper (7.7.26015): starting
08:15:41 (2430633): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 08:15:41] Arguments: --nthreads 3
[2025-11-23 08:15:41] Threads: 3
[2025-11-23 08:15:41] Checking for CVMFS
[2025-11-23 08:15:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:15:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:15:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:15:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:15:43] 2.9.2.0 2430758 0 30032 153201 3 1 34810390 36864001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 08:15:43] CVMFS is ok
[2025-11-23 08:15:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:15:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:15:43] Further information can be found at the LHC@home message board.
[2025-11-23 08:15:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:15:43] Checking for apptainer binary...
[2025-11-23 08:15:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:15:43] Running /usr/bin/apptainer --version
[2025-11-23 08:15:43] apptainer version 1.4.1-1.1
[2025-11-23 08:15:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:15:43] thA335
[2025-11-23 08:15:43] apptainer works
[2025-11-23 08:15:43] Set ATHENA_PROC_NUMBER=3
[2025-11-23 08:15:43] Set ATHENA_CORE_NUMBER=3
[2025-11-23 08:15:43] Starting ATLAS job with PandaID=6895350178
[2025-11-23 08:15:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 08:20:02]  *** The last 200 lines of the pilot log: ***
[2025-11-23 08:20:02] 2025-11-23 07:19:14,572 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 08:20:02] 2025-11-23 07:19:14,585 | INFO     | sufficient remaining disk space (827636842496 B)
[2025-11-23 08:20:02] 2025-11-23 07:19:14,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 08:20:02] 2025-11-23 07:19:14,586 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 08:20:02] 2025-11-23 07:19:14,586 | INFO     | update_server=False
[2025-11-23 08:20:02] 2025-11-23 07:19:14,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 08:20:02] 2025-11-23 07:19:14,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:20:02] 2025-11-23 07:19:14,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:20:02] 2025-11-23 07:19:14,586 | INFO     | aborting loop
[2025-11-23 08:20:02] 2025-11-23 07:19:15,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 08:20:02] 2025-11-23 07:19:15,266 | INFO     | all job control threads have been joined
[2025-11-23 08:20:02] 2025-11-23 07:19:15,392 | INFO     | all data control threads have been joined
[2025-11-23 08:20:02] 2025-11-23 07:19:15,592 | INFO     | [job] retrieve thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:15,592 | INFO     | [job] queue monitor thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:15,593 | INFO     | [job] job monitor thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:15,645 | INFO     | [payload] failed_post thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:15,827 | INFO     | all payload control threads have been joined
[2025-11-23 08:20:02] 2025-11-23 07:19:16,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,142 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,272 | INFO     | [job] control thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,398 | INFO     | [data] control thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,700 | INFO     | [payload] validate_post thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,782 | INFO     | [job] validate thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,832 | INFO     | [payload] control thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,876 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,919 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:16,921 | INFO     | [data] copytool_in thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:17,170 | INFO     | [data] copytool_out thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:17,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 08:20:02] 2025-11-23 07:19:21,479 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 08:20:02] 2025-11-23 07:19:44,507 | INFO     | PID=2434838 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 08:20:02] 2025-11-23 07:19:44,507 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 08:20:02] 2025-11-23 07:19:44,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 08:20:02] 2025-11-23 07:19:44,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 08:20:02] 2025-11-23 07:19:55,575 | INFO     | [monitor] cgroup control has ended
[2025-11-23 08:20:02] 2025-11-23 07:19:57,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600164824896)>', '<ExcThread(monitor, started 140599378310912)>']
[2025-11-23 08:20:02] 2025-11-23 07:19:57,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 08:20:02] 2025-11-23 07:19:57,577 | INFO     | [monitor] control thread has ended
[2025-11-23 08:20:02] 2025-11-23 07:20:02,326 | INFO     | all workflow threads have been joined
[2025-11-23 08:20:02] 2025-11-23 07:20:02,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 08:20:02] 2025-11-23 07:20:02,328 | INFO     | traces error code: 0
[2025-11-23 08:20:02] 2025-11-23 07:20:02,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 08:20:02] 2025-11-23 07:20:02,374 [wrapper] ==== pilot stdout END ====
[2025-11-23 08:20:02] 2025-11-23 07:20:02,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 08:20:02] 2025-11-23 07:20:02,381 [wrapper] pilotpid: 2434838
[2025-11-23 08:20:02] 2025-11-23 07:20:02,384 [wrapper] Pilot exit status: 0
[2025-11-23 08:20:02] 2025-11-23 07:20:02,391 [wrapper] pandaids: 6895350178
[2025-11-23 08:20:02] 2025-11-23 07:20:02,407 [wrapper] cleanup supervisor_pilot 2434844 2434839
[2025-11-23 08:20:02] 2025-11-23 07:20:02,410 [wrapper] Test setup, not cleaning
[2025-11-23 08:20:02] 2025-11-23 07:20:02,413 [wrapper] apfmon messages muted
[2025-11-23 08:20:02] 2025-11-23 07:20:02,415 [wrapper] ==== wrapper stdout END ====
[2025-11-23 08:20:02] 2025-11-23 07:20:02,417 [wrapper] ==== wrapper stderr END ====
[2025-11-23 08:20:02]  *** Error codes and diagnostics ***
[2025-11-23 08:20:02]     "exeErrorCode": 65,
[2025-11-23 08:20:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 08:20:02]     "pilotErrorCode": 1305,
[2025-11-23 08:20:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 08:20:02]  *** Listing of results directory ***
[2025-11-23 08:20:02] total 404952
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc      5112 Nov 22 21:39 queuedata.json
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc    576529 Nov 22 21:41 pilot3.tar.gz
[2025-11-23 08:20:02] -rwx------ 1 boinc boinc     36292 Nov 22 21:44 runpilot2-wrapper.sh
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc       100 Nov 23 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 08:20:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 08:15 run_atlas
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc       105 Nov 23 08:15 job.xml
[2025-11-23 08:20:02] -rw-r--r-- 2 boinc boinc 410460610 Nov 23 08:15 EVNT.47483658._000499.pool.root.1
[2025-11-23 08:20:02] -rw-r--r-- 2 boinc boinc    590106 Nov 23 08:15 input.tar.gz
[2025-11-23 08:20:02] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:15 start_atlas.sh
[2025-11-23 08:20:02] drwxrwx--x 2 boinc boinc      4096 Nov 23 08:15 shared
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:15 boinc_setup_complete
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc      6194 Nov 23 08:15 init_data.xml
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:15 boinc_lockfile
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc      2785 Nov 23 08:15 pandaJob.out
[2025-11-23 08:20:02] -rw------- 1 boinc boinc    989784 Nov 23 08:15 agis_schedconf.cvmfs.json
[2025-11-23 08:20:02] -rw------- 1 boinc boinc   1526164 Nov 23 08:15 agis_ddmendpoints.agis.ALL.json
[2025-11-23 08:20:02] drwx------ 5 boinc boinc      4096 Nov 23 08:15 pilot3
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc       522 Nov 23 08:16 boinc_task_state.xml
[2025-11-23 08:20:02] -rw------- 1 boinc boinc       962 Nov 23 08:17 memory_monitor_summary.json
[2025-11-23 08:20:02] -rw------- 1 boinc boinc     55854 Nov 23 08:17 log.47556137._004946.job.log.tgz.1
[2025-11-23 08:20:02] -rw------- 1 boinc boinc        95 Nov 23 08:18 pilot_heartbeat.json
[2025-11-23 08:20:02] -rw------- 1 boinc boinc      8414 Nov 23 08:19 heartbeat.json
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc      8192 Nov 23 08:19 boinc_mmap_file
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc        22 Nov 23 08:19 wrapper_checkpoint.txt
[2025-11-23 08:20:02] -rw------- 1 boinc boinc      4752 Nov 23 08:20 pilotlog.txt
[2025-11-23 08:20:02] -rw------- 1 boinc boinc     93513 Nov 23 08:20 log.47556137._004946.job.log.1
[2025-11-23 08:20:02] -rw------- 1 boinc boinc       186 Nov 23 08:20 output.list
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc       620 Nov 23 08:20 runtime_log
[2025-11-23 08:20:02] -rw------- 1 boinc boinc    174080 Nov 23 08:20 result.tar.gz
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc      8744 Nov 23 08:20 runtime_log.err
[2025-11-23 08:20:02] -rw------- 1 boinc boinc       648 Nov 23 08:20 N7RKDmsd9g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeOKKDmcecUbm.diag
[2025-11-23 08:20:02] -rw-r--r-- 1 boinc boinc      8222 Nov 23 08:20 stderr.txt
[2025-11-23 08:20:02] No HITS result produced
[2025-11-23 08:20:02]  *** Contents of shared directory: ***
[2025-11-23 08:20:02] total 401616
[2025-11-23 08:20:02] -rw-r--r-- 2 boinc boinc 410460610 Nov 23 08:15 ATLAS.root_0
[2025-11-23 08:20:02] -rw-r--r-- 2 boinc boinc    590106 Nov 23 08:15 input.tar.gz
[2025-11-23 08:20:02] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:15 start_atlas.sh
[2025-11-23 08:20:02] -rw------- 1 boinc boinc    174080 Nov 23 08:20 result.tar.gz
08:20:04 (2430633): run_atlas exited; CPU time 31.656050
08:20:04 (2430633): called boinc_finish(0)

</stderr_txt>
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