Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:08:06 (8685): wrapper (7.7.26015): starting
23:08:06 (8685): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:08:06] Arguments: --nthreads 8
[2025-11-25 23:08:06] Threads: 8
[2025-11-25 23:08:06] Checking for CVMFS
[2025-11-25 23:08:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:08:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:08:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:08:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:08:09] 2.11.2.0 24942 82659 86424 153298 3 85 20540434 25165824 4632 130560 14 23355097 99.880 15282865 1751 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 23:08:09] CVMFS is ok
[2025-11-25 23:08:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:08:09] Checking for apptainer binary...
[2025-11-25 23:08:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:08:09] Running /usr/bin/apptainer --version
[2025-11-25 23:08:09] apptainer version 1.3.2-1.el7
[2025-11-25 23:08:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:08:17] cg-vwn352.simple-grid.lan
[2025-11-25 23:08:17] apptainer works
[2025-11-25 23:08:17] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:08:17] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:08:17] Starting ATLAS job with PandaID=6895331137
[2025-11-25 23:08:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:07:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:07:12] 2025-11-26 22:06:23,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:07:12] 2025-11-26 22:06:25,360 | INFO     | time since job start (86042s) is within the limit (172800.0s)
[2025-11-26 23:07:12] 2025-11-26 22:06:26,137 | INFO     | monitor loop #5800: job 0:6895331137 is in state 'finished'
[2025-11-26 23:07:12] 2025-11-26 22:06:26,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:07:12] 2025-11-26 22:06:27,367 | INFO     | time since job start (86044s) is within the limit (172800.0s)
[2025-11-26 23:07:12] 2025-11-26 22:06:28,646 | INFO     | monitor loop #5801: job 0:6895331137 is in state 'finished'
[2025-11-26 23:07:12] 2025-11-26 22:06:28,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:07:12] 2025-11-26 22:06:29,374 | INFO     | time since job start (86046s) is within the limit (172800.0s)
[2025-11-26 23:07:12] 2025-11-26 22:06:29,374 | INFO     | 86056s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 23:07:12] 2025-11-26 22:06:31,153 | INFO     | monitor loop #5802: job 0:6895331137 is in state 'finished'
[2025-11-26 23:07:12] 2025-11-26 22:06:31,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:07:12] 2025-11-26 22:06:31,387 | INFO     | time since job start (86048s) is within the limit (172800.0s)
[2025-11-26 23:07:12] 2025-11-26 22:06:33,394 | INFO     | time since job start (86050s) is within the limit (172800.0s)
[2025-11-26 23:07:12] 2025-11-26 22:06:33,658 | INFO     | monitor loop #5803: job 0:6895331137 is in state 'finished'
[2025-11-26 23:07:12] 2025-11-26 22:06:33,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,185 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:07:12] 2025-11-26 22:06:35,187 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 23:07:12] 2025-11-26 22:06:35,189 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895331137/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,190 | INFO     | extracted standard info from prmon json
[2025-11-26 23:07:12] 2025-11-26 22:06:35,190 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:07:12] 2025-11-26 22:06:35,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:07:12] 2025-11-26 22:06:35,221 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:07:12] 2025-11-26 22:06:35,223 | INFO     | sum of square deviations: 852688146870.1277
[2025-11-26 23:07:12] 2025-11-26 22:06:35,292 | INFO     | sum of deviations: 2891397915015.9497
[2025-11-26 23:07:12] 2025-11-26 22:06:35,292 | INFO     | mean x: 1764151963.1220558
[2025-11-26 23:07:12] 2025-11-26 22:06:35,293 | INFO     | mean y: 2836439.6552462527
[2025-11-26 23:07:12] 2025-11-26 22:06:35,293 | INFO     | intersect: -5979263026.211161
[2025-11-26 23:07:12] 2025-11-26 22:06:35,294 | INFO     | chi2: 26.435995565241488
[2025-11-26 23:07:12] 2025-11-26 22:06:35,296 | INFO     | sum of square deviations: 843591692968.8112
[2025-11-26 23:07:12] 2025-11-26 22:06:35,363 | INFO     | sum of deviations: 3356989529801.3
[2025-11-26 23:07:12] 2025-11-26 22:06:35,364 | INFO     | mean x: 1764151810.6260746
[2025-11-26 23:07:12] 2025-11-26 22:06:35,364 | INFO     | mean y: 2844244.3875358165
[2025-11-26 23:07:12] 2025-11-26 22:06:35,364 | INFO     | intersect: -7017423032.557652
[2025-11-26 23:07:12] 2025-11-26 22:06:35,366 | INFO     | chi2: 23.14716591934722
[2025-11-26 23:07:12] 2025-11-26 22:06:35,366 | INFO     | current chi2=23.14716591934722 (change=12.44072551675897 %)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,366 | INFO     | right removable region: 1395
[2025-11-26 23:07:12] 2025-11-26 22:06:35,368 | INFO     | sum of square deviations: 843590734048.811
[2025-11-26 23:07:12] 2025-11-26 22:06:35,413 | INFO     | time since job start (86052s) is within the limit (172800.0s)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,440 | INFO     | sum of deviations: 2304491532951.4067
[2025-11-26 23:07:12] 2025-11-26 22:06:35,440 | INFO     | mean x: 1764152115.6260746
[2025-11-26 23:07:12] 2025-11-26 22:06:35,440 | INFO     | mean y: 2846277.648280802
[2025-11-26 23:07:12] 2025-11-26 22:06:35,440 | INFO     | intersect: -4816402499.286919
[2025-11-26 23:07:12] 2025-11-26 22:06:35,442 | INFO     | chi2: 21.73236513611282
[2025-11-26 23:07:12] 2025-11-26 22:06:35,442 | INFO     | current chi2=21.73236513611282 (change=17.7925223868364 %)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,442 | INFO     | left removable region: 10
[2025-11-26 23:07:12] 2025-11-26 22:06:35,444 | INFO     | sum of square deviations: 823805807801.7522
[2025-11-26 23:07:12] 2025-11-26 22:06:35,515 | INFO     | sum of deviations: 2374084420061.415
[2025-11-26 23:07:12] 2025-11-26 22:06:35,516 | INFO     | mean x: 1764152085.135018
[2025-11-26 23:07:12] 2025-11-26 22:06:35,516 | INFO     | mean y: 2864558.19566787
[2025-11-26 23:07:12] 2025-11-26 22:06:35,516 | INFO     | intersect: -5081156384.936358
[2025-11-26 23:07:12] 2025-11-26 22:06:35,518 | INFO     | chi2: 14.158402600894746
[2025-11-26 23:07:12] 2025-11-26 22:06:35,518 | INFO     | current memory leak: 2.88 B/s (using 1385 data points, chi2=14.16)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,519 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | ..............................
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . Timing measurements:
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . get job = 0 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . initial setup = 10 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . payload setup = 169 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . stage-in = 0 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . payload execution = 85587 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . stage-out = 5 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | . log creation = 1 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,520 | INFO     | ..............................
[2025-11-26 23:07:12] 2025-11-26 22:06:35,651 | INFO     | 
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | job summary report
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | --------------------------------------------------
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | PanDA job id: 6895331137
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | task id: 47556137
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | errors: (none)
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | pilot state: finished 
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | transexitcode: 0
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | exeerrorcode: 0
[2025-11-26 23:07:12] 2025-11-26 22:06:35,652 | INFO     | exeerrordiag: 
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | exitcode: 0
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | exitmsg: OK
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | cpuconsumptiontime: 321173 s
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | nevents: 1000
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | neventsw: 0
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | pid: 19181
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | pgrp: 19181
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | corecount: 8
[2025-11-26 23:07:12] 2025-11-26 22:06:35,653 | INFO     | event service: False
[2025-11-26 23:07:12] 2025-11-26 22:06:35,654 | INFO     | sizes: {0: 2284087, 1: 2284171, 2: 2284370, 12: 2284370, 23: 2284398, 34: 2284426, 45: 2284582, 55: 2284610, 66: 2284638, 77: 2284666, 88: 2284722, 97: 2285292, 98
[2025-11-26 23:07:12] 2025-11-26 22:06:35,654 | INFO     | --------------------------------------------------
[2025-11-26 23:07:12] 2025-11-26 22:06:35,654 | INFO     | 
[2025-11-26 23:07:12] 2025-11-26 22:06:35,654 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-26 23:07:12] 2025-11-26 22:06:36,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:07:12] 2025-11-26 22:06:36,226 | INFO     | job 6895331137 has completed (purged errors)
[2025-11-26 23:07:12] 2025-11-26 22:06:36,226 | INFO     | overall cleanup function is called
[2025-11-26 23:07:12] 2025-11-26 22:06:37,242 | INFO     | --- collectZombieJob: --- 10, [19181]
[2025-11-26 23:07:12] 2025-11-26 22:06:37,242 | INFO     | zombie collector waiting for pid 19181
[2025-11-26 23:07:12] 2025-11-26 22:06:37,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:07:12] 2025-11-26 22:06:37,242 | INFO     | collected zombie processes
[2025-11-26 23:07:12] 2025-11-26 22:06:37,242 | INFO     | will attempt to kill all subprocesses of pid=19181
[2025-11-26 23:07:12] 2025-11-26 22:06:37,351 | INFO     | process IDs to be killed: [19181] (in reverse order)
[2025-11-26 23:07:12] 2025-11-26 22:06:38,219 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:07:12] 2025-11-26 22:06:38,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:07:12] 2025-11-26 22:06:38,222 | INFO     | did not find any defunct processes belonging to 19181
[2025-11-26 23:07:12] 2025-11-26 22:06:38,224 | INFO     | did not find any defunct processes belonging to 19181
[2025-11-26 23:07:12] 2025-11-26 22:06:38,275 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:07:12] 2025-11-26 22:06:38,275 | INFO     | ready for new job
[2025-11-26 23:07:12] 2025-11-26 22:06:38,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:07:12] 2025-11-26 22:06:38,280 | INFO     | ***************************************
[2025-11-26 23:07:12] 2025-11-26 22:06:38,280 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:07:12] 2025-11-26 22:06:38,280 | INFO     | ***************************************
[2025-11-26 23:07:12] 2025-11-26 22:06:38,280 | INFO     | 
[2025-11-26 23:07:12] 2025-11-26 22:06:38,281 | INFO     | pilot is running in a VM
[2025-11-26 23:07:12] 2025-11-26 22:06:38,281 | INFO     | architecture information:
[2025-11-26 23:07:12] 2025-11-26 22:06:38,292 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:07:12] 2025-11-26 22:06:38,485 | INFO     | cat /etc/os-release:
[2025-11-26 23:07:12] NAME="CentOS Linux"
[2025-11-26 23:07:12] VERSION="7 (Core)"
[2025-11-26 23:07:12] ID="centos"
[2025-11-26 23:07:12] ID_LIKE="rhel fedora"
[2025-11-26 23:07:12] VERSION_ID="7"
[2025-11-26 23:07:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:07:12] ANSI_COLOR="0;31"
[2025-11-26 23:07:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:07:12] HOME_URL="https://www.centos.org/"
[2025-11-26 23:07:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:07:12] 
[2025-11-26 23:07:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:07:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:07:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:07:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:07:12] 
[2025-11-26 23:07:12] 2025-11-26 22:06:38,486 | INFO     | ***************************************
[2025-11-26 23:07:12] 2025-11-26 22:06:38,989 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-26 23:07:12] 2025-11-26 22:06:39,321 | INFO     | sufficient remaining disk space (495273902080 B)
[2025-11-26 23:07:12] 2025-11-26 22:06:39,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:07:12] 2025-11-26 22:06:39,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:07:12] 2025-11-26 22:06:39,322 | INFO     | update_server=False
[2025-11-26 23:07:12] 2025-11-26 22:06:39,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:07:12] 2025-11-26 22:06:39,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:07:12] 2025-11-26 22:06:39,537 | INFO     | all payload control threads have been joined
[2025-11-26 23:07:12] 2025-11-26 22:06:39,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:07:12] 2025-11-26 22:06:39,680 | INFO     | aborting loop
[2025-11-26 23:07:12] 2025-11-26 22:06:39,961 | INFO     | all data control threads have been joined
[2025-11-26 23:07:12] 2025-11-26 22:06:40,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:07:12] 2025-11-26 22:06:40,328 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:40,399 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:40,543 | INFO     | [payload] control thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:40,552 | INFO     | all job control threads have been joined
[2025-11-26 23:07:12] 2025-11-26 22:06:40,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:07:12] 2025-11-26 22:06:40,686 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:40,777 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:40,967 | INFO     | [data] control thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,245 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,330 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,356 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,482 | INFO     | [job] validate thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,550 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,558 | INFO     | [job] control thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,674 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:41,802 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:44,018 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:07:12] 2025-11-26 22:06:52,950 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:07:12] 2025-11-26 22:06:53,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868774283072)>', '<ExcThread(monitor, started 139868185274112)>']
[2025-11-26 23:07:12] 2025-11-26 22:06:58,468 | INFO     | all workflow threads have been joined
[2025-11-26 23:07:12] 2025-11-26 22:06:58,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:07:12] 2025-11-26 22:06:58,468 | INFO     | traces error code: 0
[2025-11-26 23:07:12] 2025-11-26 22:06:58,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:07:12] 2025-11-26 22:07:08,582 | INFO     | PID=12614 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 23:07:12] 2025-11-26 22:07:08,582 | INFO     | .. there are 9 such processes running
[2025-11-26 23:07:12] 2025-11-26 22:07:08,583 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:07:12] 2025-11-26 22:07:08,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:07:12] 2025-11-26 22:07:08,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:07:12] 2025-11-26 22:07:08,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:07:12] 2025-11-26 22:07:08,583 | INFO     | [monitor] control thread has ended
[2025-11-26 23:07:12] 2025-11-26 22:07:08,878 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:07:12] 2025-11-26 22:07:08,957 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:07:12] 2025-11-26 22:07:09,005 [wrapper] pilotpid: 12614
[2025-11-26 23:07:12] 2025-11-26 22:07:09,048 [wrapper] Pilot exit status: 0
[2025-11-26 23:07:12] 2025-11-26 22:07:09,382 [wrapper] pandaids: 6895331137
[2025-11-26 23:07:12] 2025-11-26 22:07:10,021 [wrapper] cleanup supervisor_pilot 23028 12615
[2025-11-26 23:07:12] 2025-11-26 22:07:10,073 [wrapper] Test setup, not cleaning
[2025-11-26 23:07:12] 2025-11-26 22:07:10,114 [wrapper] apfmon messages muted
[2025-11-26 23:07:12] 2025-11-26 22:07:10,184 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:07:12] 2025-11-26 22:07:10,224 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:07:12]  *** Error codes and diagnostics ***
[2025-11-26 23:07:12]     "exeErrorCode": 0,
[2025-11-26 23:07:12]     "exeErrorDiag": "",
[2025-11-26 23:07:12]     "pilotErrorCode": 0,
[2025-11-26 23:07:12]     "pilotErrorDiag": "",
[2025-11-26 23:07:12]  *** Listing of results directory ***
[2025-11-26 23:07:12] total 1331188
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc    576529 Nov 21 23:05 pilot3.tar.gz
[2025-11-26 23:07:12] -rwx------. 1 boinc boinc     36292 Nov 21 23:39 runpilot2-wrapper.sh
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc      5112 Nov 21 23:39 queuedata.json
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc       100 Nov 25 23:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:07:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 23:08 run_atlas
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc       105 Nov 25 23:08 job.xml
[2025-11-26 23:07:12] -rw-r--r--. 2 boinc boinc 410602702 Nov 25 23:08 EVNT.47483658._000160.pool.root.1
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc      6392 Nov 25 23:08 init_data.xml
[2025-11-26 23:07:12] -rw-r--r--. 2 boinc boinc     15847 Nov 25 23:08 start_atlas.sh
[2025-11-26 23:07:12] drwxrwx--x. 2 boinc boinc        68 Nov 25 23:08 shared
[2025-11-26 23:07:12] -rw-r--r--. 2 boinc boinc    590092 Nov 25 23:08 input.tar.gz
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc         0 Nov 25 23:08 boinc_lockfile
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc      2785 Nov 25 23:08 pandaJob.out
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc    991893 Nov 25 23:12 agis_schedconf.cvmfs.json
[2025-11-26 23:07:12] drwx------. 5 boinc boinc      4096 Nov 25 23:12 pilot3
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc       533 Nov 26 22:38 boinc_task_state.xml
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc 920697726 Nov 26 23:03 HITS.47556137._001599.pool.root.1
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc      1030 Nov 26 23:04 memory_monitor_summary.json
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc   1516240 Nov 26 23:04 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc   2493612 Nov 26 23:04 log.47556137._001599.job.log.tgz.1
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc      7947 Nov 26 23:06 heartbeat.json
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc        95 Nov 26 23:07 pilot_heartbeat.json
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc       820 Nov 26 23:07 pilotlog.txt
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc  11477239 Nov 26 23:07 log.47556137._001599.job.log.1
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc       353 Nov 26 23:07 output.list
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc      8192 Nov 26 23:07 boinc_mmap_file
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc        29 Nov 26 23:07 wrapper_checkpoint.txt
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc       620 Nov 26 23:07 runtime_log
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc  13987840 Nov 26 23:07 result.tar.gz
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc      8817 Nov 26 23:07 runtime_log.err
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc       662 Nov 26 23:07 7DELDmfxog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhqHKDmIxb5To.diag
[2025-11-26 23:07:12] -rw-r--r--. 1 boinc boinc     21449 Nov 26 23:07 stderr.txt
[2025-11-26 23:07:12] HITS file was successfully produced:
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc 920697726 Nov 26 23:03 shared/HITS.pool.root.1
[2025-11-26 23:07:12]  *** Contents of shared directory: ***
[2025-11-26 23:07:12] total 1314356
[2025-11-26 23:07:12] -rw-r--r--. 2 boinc boinc 410602702 Nov 25 23:08 ATLAS.root_0
[2025-11-26 23:07:12] -rw-r--r--. 2 boinc boinc     15847 Nov 25 23:08 start_atlas.sh
[2025-11-26 23:07:12] -rw-r--r--. 2 boinc boinc    590092 Nov 25 23:08 input.tar.gz
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc 920697726 Nov 26 23:03 HITS.pool.root.1
[2025-11-26 23:07:12] -rw-------. 1 boinc boinc  13987840 Nov 26 23:07 result.tar.gz
23:07:14 (8685): run_atlas exited; CPU time 321793.823293
23:07:14 (8685): called boinc_finish(0)

</stderr_txt>
]]>

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