Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:26:02 (29624): wrapper (7.7.26015): starting
02:26:02 (29624): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 02:26:02] Arguments: --nthreads 8
[2025-11-23 02:26:02] Threads: 8
[2025-11-23 02:26:02] Checking for CVMFS
[2025-11-23 02:26:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 02:26:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 02:26:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 02:26:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 02:26:02] 2.11.2.0 27562 329445 279712 153201 0 82 9838378 18432000 2707 130560 7 671100088 99.307 1126967145 26040 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-23 02:26:02] CVMFS is ok
[2025-11-23 02:26:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 02:26:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 02:26:02] Further information can be found at the LHC@home message board.
[2025-11-23 02:26:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 02:26:02] Checking for apptainer binary...
[2025-11-23 02:26:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 02:26:02] Running /usr/bin/apptainer --version
[2025-11-23 02:26:02] apptainer version 1.3.2-1.el7
[2025-11-23 02:26:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 02:26:03] c-9-30.aglt2.org
[2025-11-23 02:26:03] apptainer works
[2025-11-23 02:26:03] Set ATHENA_PROC_NUMBER=8
[2025-11-23 02:26:03] Set ATHENA_CORE_NUMBER=8
[2025-11-23 02:26:03] Starting ATLAS job with PandaID=6895338421
[2025-11-23 02:26:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:43:04]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:43:04] 2025-11-24 00:42:29,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,728 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 19:43:04] 2025-11-24 00:42:29,732 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9416562500014
[2025-11-23 19:43:04] 2025-11-24 00:42:29,736 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895338421/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,736 | INFO     | extracted standard info from prmon json
[2025-11-23 19:43:04] 2025-11-24 00:42:29,736 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:43:04] 2025-11-24 00:42:29,736 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:43:04] 2025-11-24 00:42:29,748 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:43:04] 2025-11-24 00:42:29,749 | INFO     | sum of square deviations: 328095761323.97406
[2025-11-23 19:43:04] 2025-11-24 00:42:29,765 | INFO     | sum of deviations: 1577312788619.248
[2025-11-23 19:43:04] 2025-11-24 00:42:29,765 | INFO     | mean x: 1763913847.642787
[2025-11-23 19:43:04] 2025-11-24 00:42:29,765 | INFO     | mean y: 2878297.462217861
[2025-11-23 19:43:04] 2025-11-24 00:42:29,765 | INFO     | intersect: -8477096752.146118
[2025-11-23 19:43:04] 2025-11-24 00:42:29,766 | INFO     | chi2: 4.478909860952522
[2025-11-23 19:43:04] 2025-11-24 00:42:29,767 | INFO     | sum of square deviations: 323289945404.39886
[2025-11-23 19:43:04] 2025-11-24 00:42:29,789 | INFO     | sum of deviations: 1838570678898.254
[2025-11-23 19:43:04] 2025-11-24 00:42:29,789 | INFO     | mean x: 1763913695.1459565
[2025-11-23 19:43:04] 2025-11-24 00:42:29,789 | INFO     | mean y: 2886582.5118343197
[2025-11-23 19:43:04] 2025-11-24 00:42:29,790 | INFO     | intersect: -10028603867.788763
[2025-11-23 19:43:04] 2025-11-24 00:42:29,791 | INFO     | chi2: 2.506599034552743
[2025-11-23 19:43:04] 2025-11-24 00:42:29,791 | INFO     | current chi2=2.506599034552743 (change=44.03551059588262 %)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,793 | INFO     | sum of square deviations: 318531293159.8014
[2025-11-23 19:43:04] 2025-11-24 00:42:29,820 | INFO     | sum of deviations: 1959973887936.8381
[2025-11-23 19:43:04] 2025-11-24 00:42:29,820 | INFO     | mean x: 1763913542.6491575
[2025-11-23 19:43:04] 2025-11-24 00:42:29,821 | INFO     | mean y: 2890470.5758176413
[2025-11-23 19:43:04] 2025-11-24 00:42:29,821 | INFO     | intersect: -10850751097.494808
[2025-11-23 19:43:04] 2025-11-24 00:42:29,822 | INFO     | chi2: 1.9886965083643338
[2025-11-23 19:43:04] 2025-11-24 00:42:29,822 | INFO     | current chi2=1.9886965083643338 (change=20.661562501591703 %)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,822 | INFO     | right removable region: 1008
[2025-11-23 19:43:04] 2025-11-24 00:42:29,824 | INFO     | sum of square deviations: 323289545854.3988
[2025-11-23 19:43:04] 2025-11-24 00:42:29,851 | INFO     | sum of deviations: 1346486313443.7925
[2025-11-23 19:43:04] 2025-11-24 00:42:29,852 | INFO     | mean x: 1763914000.1459565
[2025-11-23 19:43:04] 2025-11-24 00:42:29,852 | INFO     | mean y: 2885609.8392504933
[2025-11-23 19:43:04] 2025-11-24 00:42:29,852 | INFO     | intersect: -7343736295.337044
[2025-11-23 19:43:04] 2025-11-24 00:42:29,853 | INFO     | chi2: 2.7515575528040594
[2025-11-23 19:43:04] 2025-11-24 00:42:29,854 | INFO     | current chi2=2.7515575528040594 (change=38.56635569310408 %)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,855 | INFO     | sum of square deviations: 318530494059.8008
[2025-11-23 19:43:04] 2025-11-24 00:42:29,884 | INFO     | sum of deviations: 1283621504208.8428
[2025-11-23 19:43:04] 2025-11-24 00:42:29,885 | INFO     | mean x: 1763914152.6491575
[2025-11-23 19:43:04] 2025-11-24 00:42:29,885 | INFO     | mean y: 2887623.4628344895
[2025-11-23 19:43:04] 2025-11-24 00:42:29,885 | INFO     | intersect: -7105374160.395444
[2025-11-23 19:43:04] 2025-11-24 00:42:29,886 | INFO     | chi2: 2.7025659680221183
[2025-11-23 19:43:04] 2025-11-24 00:42:29,886 | INFO     | current chi2=2.7025659680221183 (change=1.7805037271350082 %)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,886 | INFO     | left removable region: 20
[2025-11-23 19:43:04] 2025-11-24 00:42:29,888 | INFO     | sum of square deviations: 299053134392.7639
[2025-11-23 19:43:04] 2025-11-24 00:42:29,905 | INFO     | sum of deviations: 1611188623995.5112
[2025-11-23 19:43:04] 2025-11-24 00:42:29,905 | INFO     | mean x: 1763914122.1629555
[2025-11-23 19:43:04] 2025-11-24 00:42:29,905 | INFO     | mean y: 2902686.003036437
[2025-11-23 19:43:04] 2025-11-24 00:42:29,905 | INFO     | intersect: -9500419769.067507
[2025-11-23 19:43:04] 2025-11-24 00:42:29,906 | INFO     | chi2: 0.16299449188874712
[2025-11-23 19:43:04] 2025-11-24 00:42:29,906 | INFO     | current memory leak: 5.39 B/s (using 988 data points, chi2=0.16)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,907 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,907 | INFO     | ..............................
[2025-11-23 19:43:04] 2025-11-24 00:42:29,907 | INFO     | . Timing measurements:
[2025-11-23 19:43:04] 2025-11-24 00:42:29,907 | INFO     | . get job = 0 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,907 | INFO     | . initial setup = 2 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,908 | INFO     | . payload setup = 4 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,908 | INFO     | . stage-in = 0 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,908 | INFO     | . payload execution = 62141 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,908 | INFO     | . stage-out = 3 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,908 | INFO     | . log creation = 0 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,908 | INFO     | ..............................
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | 
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | job summary report
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | --------------------------------------------------
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | PanDA job id: 6895338421
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | task id: 47556137
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | errors: (none)
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:43:04] 2025-11-24 00:42:29,978 | INFO     | pilot state: finished 
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | transexitcode: 0
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | exeerrorcode: 0
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | exeerrordiag: 
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | exitcode: 0
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | exitmsg: OK
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | cpuconsumptiontime: 477253 s
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | nevents: 1000
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | neventsw: 0
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | pid: 40630
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | pgrp: 40630
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | corecount: 8
[2025-11-23 19:43:04] 2025-11-24 00:42:29,979 | INFO     | event service: False
[2025-11-23 19:43:04] 2025-11-24 00:42:29,980 | INFO     | sizes: {0: 2298755, 1: 2298755, 4: 2299045, 11: 2299073, 62149: 2352262, 62153: 2361256, 62155: 2361440, 62161: 2361686}
[2025-11-23 19:43:04] 2025-11-24 00:42:29,980 | INFO     | --------------------------------------------------
[2025-11-23 19:43:04] 2025-11-24 00:42:29,980 | INFO     | 
[2025-11-23 19:43:04] 2025-11-24 00:42:29,980 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-23 19:43:04] 2025-11-24 00:42:29,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,001 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:43:04] 2025-11-24 00:42:30,002 | INFO     | job 6895338421 has completed (purged errors)
[2025-11-23 19:43:04] 2025-11-24 00:42:30,002 | INFO     | overall cleanup function is called
[2025-11-23 19:43:04] 2025-11-24 00:42:31,013 | INFO     | --- collectZombieJob: --- 10, [40630]
[2025-11-23 19:43:04] 2025-11-24 00:42:31,014 | INFO     | zombie collector waiting for pid 40630
[2025-11-23 19:43:04] 2025-11-24 00:42:31,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:43:04] 2025-11-24 00:42:31,014 | INFO     | collected zombie processes
[2025-11-23 19:43:04] 2025-11-24 00:42:31,014 | INFO     | will attempt to kill all subprocesses of pid=40630
[2025-11-23 19:43:04] 2025-11-24 00:42:31,248 | INFO     | process IDs to be killed: [40630] (in reverse order)
[2025-11-23 19:43:04] 2025-11-24 00:42:31,343 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:43:04] 2025-11-24 00:42:31,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:43:04] 2025-11-24 00:42:31,350 | INFO     | did not find any defunct processes belonging to 40630
[2025-11-23 19:43:04] 2025-11-24 00:42:31,354 | INFO     | did not find any defunct processes belonging to 40630
[2025-11-23 19:43:04] 2025-11-24 00:42:31,356 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:43:04] 2025-11-24 00:42:31,356 | INFO     | ready for new job
[2025-11-23 19:43:04] 2025-11-24 00:42:31,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:43:04] 2025-11-24 00:42:31,360 | INFO     | ***************************************
[2025-11-23 19:43:04] 2025-11-24 00:42:31,360 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:43:04] 2025-11-24 00:42:31,360 | INFO     | ***************************************
[2025-11-23 19:43:04] 2025-11-24 00:42:31,360 | INFO     | 
[2025-11-23 19:43:04] 2025-11-24 00:42:31,361 | INFO     | architecture information:
[2025-11-23 19:43:04] 2025-11-24 00:42:31,361 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:43:04] 2025-11-24 00:42:31,374 | INFO     | cat /etc/os-release:
[2025-11-23 19:43:04] NAME="CentOS Linux"
[2025-11-23 19:43:04] VERSION="7 (Core)"
[2025-11-23 19:43:04] ID="centos"
[2025-11-23 19:43:04] ID_LIKE="rhel fedora"
[2025-11-23 19:43:04] VERSION_ID="7"
[2025-11-23 19:43:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:43:04] ANSI_COLOR="0;31"
[2025-11-23 19:43:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:43:04] HOME_URL="https://www.centos.org/"
[2025-11-23 19:43:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:43:04] 
[2025-11-23 19:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:43:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:43:04] 
[2025-11-23 19:43:04] 2025-11-24 00:42:31,374 | INFO     | ***************************************
[2025-11-23 19:43:04] 2025-11-24 00:42:31,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-23 19:43:04] 2025-11-24 00:42:31,902 | INFO     | sufficient remaining disk space (101049171968 B)
[2025-11-23 19:43:04] 2025-11-24 00:42:31,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:43:04] 2025-11-24 00:42:31,903 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:43:04] 2025-11-24 00:42:31,903 | INFO     | update_server=False
[2025-11-23 19:43:04] 2025-11-24 00:42:31,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:43:04] 2025-11-24 00:42:31,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:43:04] 2025-11-24 00:42:32,030 | INFO     | all job control threads have been joined
[2025-11-23 19:43:04] 2025-11-24 00:42:32,119 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 19:43:04] 2025-11-24 00:42:32,120 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 19:43:04] 2025-11-24 00:42:32,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:43:04] 2025-11-24 00:42:32,120 | INFO     | will abort loop
[2025-11-23 19:43:04] 2025-11-24 00:42:32,215 | INFO     | all payload control threads have been joined
[2025-11-23 19:43:04] 2025-11-24 00:42:32,351 | INFO     | all data control threads have been joined
[2025-11-23 19:43:04] 2025-11-24 00:42:32,909 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:32,909 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:32,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:43:04] 2025-11-24 00:42:33,032 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,034 | INFO     | [job] control thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,125 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,220 | INFO     | [payload] control thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,356 | INFO     | [data] control thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,359 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,405 | INFO     | [job] validate thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,473 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,494 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:33,561 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:34,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:34,131 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:34,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:43:04] 2025-11-24 00:42:34,993 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:38,545 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:43:04] 2025-11-24 00:42:58,125 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:43:04] 2025-11-24 00:42:58,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101755574080)>', '<ExcThread(monitor, started 140100943992576)>']
[2025-11-23 19:43:04] 2025-11-24 00:43:01,572 | INFO     | PID=33794 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 19:43:04] 2025-11-24 00:43:01,572 | INFO     | .. there are 4 such processes running
[2025-11-23 19:43:04] 2025-11-24 00:43:01,573 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:43:04] 2025-11-24 00:43:01,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:43:04] 2025-11-24 00:43:01,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:43:04] 2025-11-24 00:43:01,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:43:04] 2025-11-24 00:43:01,573 | INFO     | [monitor] control thread has ended
[2025-11-23 19:43:04] 2025-11-24 00:43:03,754 | INFO     | all workflow threads have been joined
[2025-11-23 19:43:04] 2025-11-24 00:43:03,755 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:43:04] 2025-11-24 00:43:03,755 | INFO     | traces error code: 0
[2025-11-23 19:43:04] 2025-11-24 00:43:03,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:43:04] 2025-11-24 00:43:03,857 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:43:04] 2025-11-24 00:43:03,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:43:04] 2025-11-24 00:43:03,862 [wrapper] pilotpid: 33794
[2025-11-23 19:43:04] 2025-11-24 00:43:03,865 [wrapper] Pilot exit status: 0
[2025-11-23 19:43:04] 2025-11-24 00:43:03,875 [wrapper] pandaids: 6895338421
[2025-11-23 19:43:04] 2025-11-24 00:43:03,942 [wrapper] cleanup supervisor_pilot 17033 33795
[2025-11-23 19:43:04] 2025-11-24 00:43:03,944 [wrapper] Test setup, not cleaning
[2025-11-23 19:43:04] 2025-11-24 00:43:03,947 [wrapper] apfmon messages muted
[2025-11-23 19:43:04] 2025-11-24 00:43:03,949 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:43:04] 2025-11-24 00:43:03,952 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:43:04]  *** Error codes and diagnostics ***
[2025-11-23 19:43:04]     "exeErrorCode": 0,
[2025-11-23 19:43:04]     "exeErrorDiag": "",
[2025-11-23 19:43:04]     "pilotErrorCode": 0,
[2025-11-23 19:43:04]     "pilotErrorDiag": "",
[2025-11-23 19:43:04]  *** Listing of results directory ***
[2025-11-23 19:43:04] total 1342732
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 03:43 pilot3.tar.gz
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 03:49 queuedata.json
[2025-11-23 19:43:04] -rwx------ 1 boincer umatlas     36292 Nov 22 03:50 runpilot2-wrapper.sh
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas       100 Nov 23 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:43:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 02:25 run_atlas
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas       105 Nov 23 02:25 job.xml
[2025-11-23 19:43:04] -rw-r--r-- 2 boincer umatlas 411976161 Nov 23 02:26 EVNT.47483658._000323.pool.root.1
[2025-11-23 19:43:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:26 start_atlas.sh
[2025-11-23 19:43:04] drwxrwx--x 2 boincer umatlas      4096 Nov 23 02:26 shared
[2025-11-23 19:43:04] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 02:26 input.tar.gz
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas         0 Nov 23 02:26 boinc_lockfile
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 02:26 pandaJob.out
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas        57 Nov 23 02:26 setup.sh.local
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas    989784 Nov 23 02:26 agis_schedconf.cvmfs.json
[2025-11-23 19:43:04] drwx------ 5 boincer umatlas      4096 Nov 23 02:26 pilot3
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas       532 Nov 23 19:30 boinc_task_state.xml
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas      6037 Nov 23 19:38 init_data.xml
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas 937686896 Nov 23 19:41 HITS.47556137._003196.pool.root.1
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas      1061 Nov 23 19:42 memory_monitor_summary.json
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas   1526164 Nov 23 19:42 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas   2214919 Nov 23 19:42 log.47556137._003196.job.log.tgz.1
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas      8645 Nov 23 19:42 heartbeat.json
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 19:42 boinc_mmap_file
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas        29 Nov 23 19:42 wrapper_checkpoint.txt
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas        95 Nov 23 19:43 pilot_heartbeat.json
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas      5008 Nov 23 19:43 pilotlog.txt
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas   8469363 Nov 23 19:43 log.47556137._003196.job.log.1
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas       353 Nov 23 19:43 output.list
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas       620 Nov 23 19:43 runtime_log
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas  10700800 Nov 23 19:43 result.tar.gz
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas      9333 Nov 23 19:43 runtime_log.err
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas       665 Nov 23 19:43 DAaMDmaVyg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmi2HKDmbCsp6n.diag
[2025-11-23 19:43:04] -rw-r--r-- 1 boincer umatlas     21307 Nov 23 19:43 stderr.txt
[2025-11-23 19:43:04] HITS file was successfully produced:
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas 937686896 Nov 23 19:41 shared/HITS.pool.root.1
[2025-11-23 19:43:04]  *** Contents of shared directory: ***
[2025-11-23 19:43:04] total 1329092
[2025-11-23 19:43:04] -rw-r--r-- 2 boincer umatlas 411976161 Nov 23 02:26 ATLAS.root_0
[2025-11-23 19:43:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:26 start_atlas.sh
[2025-11-23 19:43:04] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 02:26 input.tar.gz
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas 937686896 Nov 23 19:41 HITS.pool.root.1
[2025-11-23 19:43:04] -rw------- 1 boincer umatlas  10700800 Nov 23 19:43 result.tar.gz
19:43:06 (29624): run_atlas exited; CPU time 477742.866359
19:43:06 (29624): called boinc_finish(0)

</stderr_txt>
]]>

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