Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:11:20 (22645): wrapper (7.7.26015): starting
03:11:20 (22645): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 03:11:20] Arguments: --nthreads 12
[2025-11-23 03:11:20] Threads: 12
[2025-11-23 03:11:20] Checking for CVMFS
[2025-11-23 03:11:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 03:11:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 03:11:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 03:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 03:11:20] 2.11.2.0 2987 283058 93156 153201 0 82 12104116 20275201 1 130560 1 127128503 99.967 16891342 13988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 03:11:20] CVMFS is ok
[2025-11-23 03:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 03:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 03:11:20] Further information can be found at the LHC@home message board.
[2025-11-23 03:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:11:20] Checking for apptainer binary...
[2025-11-23 03:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 03:11:20] Running /usr/bin/apptainer --version
[2025-11-23 03:11:20] apptainer version 1.3.2-1.el7
[2025-11-23 03:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:11:22] c-205-19.aglt2.org
[2025-11-23 03:11:22] apptainer works
[2025-11-23 03:11:22] Set ATHENA_PROC_NUMBER=12
[2025-11-23 03:11:22] Set ATHENA_CORE_NUMBER=12
[2025-11-23 03:11:22] Starting ATLAS job with PandaID=6895338452
[2025-11-23 03:11:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 10:28:26]  *** The last 200 lines of the pilot log: ***
[2025-11-23 10:28:26] 2025-11-23 15:27:39,776 | INFO     | time since job start (26162s) is within the limit (172800.0s)
[2025-11-23 10:28:26] 2025-11-23 15:27:41,373 | INFO     | monitor loop #1958: job 0:6895338452 is in state 'finished'
[2025-11-23 10:28:26] 2025-11-23 15:27:41,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 10:28:26] 2025-11-23 15:27:41,782 | INFO     | time since job start (26164s) is within the limit (172800.0s)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,360 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 10:28:26] 2025-11-23 15:27:42,363 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-23 10:28:26] 2025-11-23 15:27:42,366 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895338452/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,367 | INFO     | extracted standard info from prmon json
[2025-11-23 10:28:26] 2025-11-23 15:27:42,367 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 10:28:26] 2025-11-23 15:27:42,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 10:28:26] 2025-11-23 15:27:42,373 | INFO     | fitting pss+swap vs Time
[2025-11-23 10:28:26] 2025-11-23 15:27:42,374 | INFO     | sum of square deviations: 24482135365.09091
[2025-11-23 10:28:26] 2025-11-23 15:27:42,378 | INFO     | sum of deviations: 398186767503.72797
[2025-11-23 10:28:26] 2025-11-23 15:27:42,378 | INFO     | mean x: 1763898581.2727273
[2025-11-23 10:28:26] 2025-11-23 15:27:42,378 | INFO     | mean y: 3416725.515151515
[2025-11-23 10:28:26] 2025-11-23 15:27:42,378 | INFO     | intersect: -28685301141.91793
[2025-11-23 10:28:26] 2025-11-23 15:27:42,379 | INFO     | chi2: 6.5878871808383614
[2025-11-23 10:28:26] 2025-11-23 15:27:42,379 | INFO     | sum of square deviations: 23636090069.714493
[2025-11-23 10:28:26] 2025-11-23 15:27:42,383 | INFO     | sum of deviations: 568894942087.217
[2025-11-23 10:28:26] 2025-11-23 15:27:42,383 | INFO     | mean x: 1763898428.7759433
[2025-11-23 10:28:26] 2025-11-23 15:27:42,383 | INFO     | mean y: 3447465.7075471696
[2025-11-23 10:28:26] 2025-11-23 15:27:42,384 | INFO     | intersect: -42451666367.69242
[2025-11-23 10:28:26] 2025-11-23 15:27:42,384 | INFO     | chi2: 3.333919571151279
[2025-11-23 10:28:26] 2025-11-23 15:27:42,384 | INFO     | current chi2=3.333919571151279 (change=49.393189658007906 %)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,385 | INFO     | sum of square deviations: 22809766074.329357
[2025-11-23 10:28:26] 2025-11-23 15:27:42,388 | INFO     | sum of deviations: 626559122015.658
[2025-11-23 10:28:26] 2025-11-23 15:27:42,388 | INFO     | mean x: 1763898276.2792363
[2025-11-23 10:28:26] 2025-11-23 15:27:42,389 | INFO     | mean y: 3458064.5584725537
[2025-11-23 10:28:26] 2025-11-23 15:27:42,389 | INFO     | intersect: -48448882556.0783
[2025-11-23 10:28:26] 2025-11-23 15:27:42,389 | INFO     | chi2: 2.7137057608980624
[2025-11-23 10:28:26] 2025-11-23 15:27:42,390 | INFO     | current chi2=2.7137057608980624 (change=18.603142547888236 %)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,390 | INFO     | right removable region: 418
[2025-11-23 10:28:26] 2025-11-23 15:27:42,390 | INFO     | sum of square deviations: 23636018699.714508
[2025-11-23 10:28:26] 2025-11-23 15:27:42,394 | INFO     | sum of deviations: 249507480625.46454
[2025-11-23 10:28:26] 2025-11-23 15:27:42,394 | INFO     | mean x: 1763898733.7759433
[2025-11-23 10:28:26] 2025-11-23 15:27:42,394 | INFO     | mean y: 3443454.025943396
[2025-11-23 10:28:26] 2025-11-23 15:27:42,394 | INFO     | intersect: -18616694511.43431
[2025-11-23 10:28:26] 2025-11-23 15:27:42,395 | INFO     | chi2: 4.13521030079759
[2025-11-23 10:28:26] 2025-11-23 15:27:42,395 | INFO     | current chi2=4.13521030079759 (change=37.23009840202893 %)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,395 | INFO     | sum of square deviations: 22809623334.329353
[2025-11-23 10:28:26] 2025-11-23 15:27:42,399 | INFO     | sum of deviations: 205897643182.6545
[2025-11-23 10:28:26] 2025-11-23 15:27:42,399 | INFO     | mean x: 1763898886.2792363
[2025-11-23 10:28:26] 2025-11-23 15:27:42,400 | INFO     | mean y: 3451495.293556086
[2025-11-23 10:28:26] 2025-11-23 15:27:42,400 | INFO     | intersect: -15918890499.315369
[2025-11-23 10:28:26] 2025-11-23 15:27:42,400 | INFO     | chi2: 4.021452295986696
[2025-11-23 10:28:26] 2025-11-23 15:27:42,400 | INFO     | current chi2=4.021452295986696 (change=2.7509605687757457 %)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,400 | INFO     | left removable region: 20
[2025-11-23 10:28:26] 2025-11-23 15:27:42,401 | INFO     | sum of square deviations: 19549052399.690804
[2025-11-23 10:28:26] 2025-11-23 15:27:42,404 | INFO     | sum of deviations: 375064073726.0477
[2025-11-23 10:28:26] 2025-11-23 15:27:42,404 | INFO     | mean x: 1763898855.7914572
[2025-11-23 10:28:26] 2025-11-23 15:27:42,404 | INFO     | mean y: 3505581.0728643215
[2025-11-23 10:28:26] 2025-11-23 15:27:42,405 | INFO     | intersect: -33838292832.86571
[2025-11-23 10:28:26] 2025-11-23 15:27:42,405 | INFO     | chi2: 0.061743148590097295
[2025-11-23 10:28:26] 2025-11-23 15:27:42,405 | INFO     | current memory leak: 19.19 B/s (using 398 data points, chi2=0.06)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | could have reported an average CPU frequency of 2428 MHz (18 samples)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | ..............................
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | . Timing measurements:
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | . get job = 0 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | . initial setup = 2 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | . payload setup = 7 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | . stage-in = 0 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,406 | INFO     | . payload execution = 26127 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,407 | INFO     | . stage-out = 3 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,407 | INFO     | . log creation = 0 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,407 | INFO     | ..............................
[2025-11-23 10:28:26] 2025-11-23 15:27:42,529 | INFO     | 
[2025-11-23 10:28:26] 2025-11-23 15:27:42,529 | INFO     | job summary report
[2025-11-23 10:28:26] 2025-11-23 15:27:42,529 | INFO     | --------------------------------------------------
[2025-11-23 10:28:26] 2025-11-23 15:27:42,529 | INFO     | PanDA job id: 6895338452
[2025-11-23 10:28:26] 2025-11-23 15:27:42,530 | INFO     | task id: 47556137
[2025-11-23 10:28:26] 2025-11-23 15:27:42,530 | INFO     | errors: (none)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 10:28:26] 2025-11-23 15:27:42,530 | INFO     | pilot state: finished 
[2025-11-23 10:28:26] 2025-11-23 15:27:42,530 | INFO     | transexitcode: 0
[2025-11-23 10:28:26] 2025-11-23 15:27:42,530 | INFO     | exeerrorcode: 0
[2025-11-23 10:28:26] 2025-11-23 15:27:42,530 | INFO     | exeerrordiag: 
[2025-11-23 10:28:26] 2025-11-23 15:27:42,531 | INFO     | exitcode: 0
[2025-11-23 10:28:26] 2025-11-23 15:27:42,531 | INFO     | exitmsg: OK
[2025-11-23 10:28:26] 2025-11-23 15:27:42,531 | INFO     | cpuconsumptiontime: 299644 s
[2025-11-23 10:28:26] 2025-11-23 15:27:42,531 | INFO     | nevents: 1000
[2025-11-23 10:28:26] 2025-11-23 15:27:42,531 | INFO     | neventsw: 0
[2025-11-23 10:28:26] 2025-11-23 15:27:42,531 | INFO     | pid: 335
[2025-11-23 10:28:26] 2025-11-23 15:27:42,532 | INFO     | pgrp: 335
[2025-11-23 10:28:26] 2025-11-23 15:27:42,532 | INFO     | corecount: 12
[2025-11-23 10:28:26] 2025-11-23 15:27:42,532 | INFO     | event service: False
[2025-11-23 10:28:26] 2025-11-23 15:27:42,532 | INFO     | sizes: {0: 2298705, 5: 2298967, 11: 2299023, 26138: 2336398, 26141: 2345448, 26149: 2345638}
[2025-11-23 10:28:26] 2025-11-23 15:27:42,532 | INFO     | --------------------------------------------------
[2025-11-23 10:28:26] 2025-11-23 15:27:42,532 | INFO     | 
[2025-11-23 10:28:26] 2025-11-23 15:27:42,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 10:28:26] 2025-11-23 15:27:42,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 10:28:26] 2025-11-23 15:27:42,573 | INFO     | job 6895338452 has completed (purged errors)
[2025-11-23 10:28:26] 2025-11-23 15:27:42,573 | INFO     | overall cleanup function is called
[2025-11-23 10:28:26] 2025-11-23 15:27:43,590 | INFO     | --- collectZombieJob: --- 10, [335]
[2025-11-23 10:28:26] 2025-11-23 15:27:43,590 | INFO     | zombie collector waiting for pid 335
[2025-11-23 10:28:26] 2025-11-23 15:27:43,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 10:28:26] 2025-11-23 15:27:43,590 | INFO     | collected zombie processes
[2025-11-23 10:28:26] 2025-11-23 15:27:43,590 | INFO     | will attempt to kill all subprocesses of pid=335
[2025-11-23 10:28:26] 2025-11-23 15:27:43,684 | INFO     | process IDs to be killed: [335] (in reverse order)
[2025-11-23 10:28:26] 2025-11-23 15:27:43,733 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 10:28:26] 2025-11-23 15:27:43,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 10:28:26] 2025-11-23 15:27:43,737 | INFO     | did not find any defunct processes belonging to 335
[2025-11-23 10:28:26] 2025-11-23 15:27:43,739 | INFO     | did not find any defunct processes belonging to 335
[2025-11-23 10:28:26] 2025-11-23 15:27:43,741 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 10:28:26] 2025-11-23 15:27:43,741 | INFO     | ready for new job
[2025-11-23 10:28:26] 2025-11-23 15:27:43,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 10:28:26] 2025-11-23 15:27:43,743 | INFO     | ***************************************
[2025-11-23 10:28:26] 2025-11-23 15:27:43,744 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 10:28:26] 2025-11-23 15:27:43,744 | INFO     | ***************************************
[2025-11-23 10:28:26] 2025-11-23 15:27:43,744 | INFO     | 
[2025-11-23 10:28:26] 2025-11-23 15:27:43,744 | INFO     | architecture information:
[2025-11-23 10:28:26] 2025-11-23 15:27:43,745 | INFO     | executing command: cat /etc/os-release
[2025-11-23 10:28:26] 2025-11-23 15:27:43,760 | INFO     | cat /etc/os-release:
[2025-11-23 10:28:26] NAME="CentOS Linux"
[2025-11-23 10:28:26] VERSION="7 (Core)"
[2025-11-23 10:28:26] ID="centos"
[2025-11-23 10:28:26] ID_LIKE="rhel fedora"
[2025-11-23 10:28:26] VERSION_ID="7"
[2025-11-23 10:28:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 10:28:26] ANSI_COLOR="0;31"
[2025-11-23 10:28:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 10:28:26] HOME_URL="https://www.centos.org/"
[2025-11-23 10:28:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 10:28:26] 
[2025-11-23 10:28:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 10:28:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 10:28:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 10:28:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 10:28:26] 
[2025-11-23 10:28:26] 2025-11-23 15:27:43,760 | INFO     | ***************************************
[2025-11-23 10:28:26] 2025-11-23 15:27:44,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 10:28:26] 2025-11-23 15:27:44,279 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-23 10:28:26] 2025-11-23 15:27:44,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 10:28:26] 2025-11-23 15:27:44,280 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 10:28:26] 2025-11-23 15:27:44,280 | INFO     | update_server=False
[2025-11-23 10:28:26] 2025-11-23 15:27:44,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 10:28:26] 2025-11-23 15:27:44,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:28:26] 2025-11-23 15:27:44,736 | INFO     | all payload control threads have been joined
[2025-11-23 10:28:26] 2025-11-23 15:27:44,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 10:28:26] 2025-11-23 15:27:44,897 | INFO     | aborting loop
[2025-11-23 10:28:26] 2025-11-23 15:27:45,012 | INFO     | all job control threads have been joined
[2025-11-23 10:28:26] 2025-11-23 15:27:45,107 | INFO     | all data control threads have been joined
[2025-11-23 10:28:26] 2025-11-23 15:27:45,286 | INFO     | [job] retrieve thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:45,286 | INFO     | [job] queue monitor thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:45,354 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:45,520 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:45,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:45,718 | INFO     | [payload] validate_post thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:45,741 | INFO     | [payload] control thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:45,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 10:28:26] 2025-11-23 15:27:45,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 10:28:26] 2025-11-23 15:27:45,898 | INFO     | [job] job monitor thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:46,017 | INFO     | [job] control thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:46,112 | INFO     | [data] control thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:46,133 | INFO     | [data] copytool_in thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:46,337 | INFO     | [job] validate thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:46,345 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:46,405 | INFO     | [payload] failed_post thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:47,784 | INFO     | [data] copytool_out thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:27:49,855 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 10:28:26] 2025-11-23 15:28:14,980 | INFO     | PID=26335 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 10:28:26] 2025-11-23 15:28:14,981 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 10:28:26] 2025-11-23 15:28:14,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 10:28:26] 2025-11-23 15:28:14,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 10:28:26] 2025-11-23 15:28:19,994 | INFO     | [monitor] cgroup control has ended
[2025-11-23 10:28:26] 2025-11-23 15:28:21,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059375019840)>', '<ExcThread(monitor, started 140058925451008)>']
[2025-11-23 10:28:26] 2025-11-23 15:28:22,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 10:28:26] 2025-11-23 15:28:22,017 | INFO     | [monitor] control thread has ended
[2025-11-23 10:28:26] 2025-11-23 15:28:26,386 | INFO     | all workflow threads have been joined
[2025-11-23 10:28:26] 2025-11-23 15:28:26,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 10:28:26] 2025-11-23 15:28:26,387 | INFO     | traces error code: 0
[2025-11-23 10:28:26] 2025-11-23 15:28:26,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 10:28:26] 2025-11-23 15:28:26,498 [wrapper] ==== pilot stdout END ====
[2025-11-23 10:28:26] 2025-11-23 15:28:26,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 10:28:26] 2025-11-23 15:28:26,505 [wrapper] pilotpid: 26335
[2025-11-23 10:28:26] 2025-11-23 15:28:26,509 [wrapper] Pilot exit status: 0
[2025-11-23 10:28:26] 2025-11-23 15:28:26,523 [wrapper] pandaids: 6895338452
[2025-11-23 10:28:26] 2025-11-23 15:28:26,566 [wrapper] cleanup supervisor_pilot 16641 26336
[2025-11-23 10:28:26] 2025-11-23 15:28:26,570 [wrapper] Test setup, not cleaning
[2025-11-23 10:28:26] 2025-11-23 15:28:26,574 [wrapper] apfmon messages muted
[2025-11-23 10:28:26] 2025-11-23 15:28:26,578 [wrapper] ==== wrapper stdout END ====
[2025-11-23 10:28:26] 2025-11-23 15:28:26,582 [wrapper] ==== wrapper stderr END ====
[2025-11-23 10:28:26]  *** Error codes and diagnostics ***
[2025-11-23 10:28:26]     "exeErrorCode": 0,
[2025-11-23 10:28:26]     "exeErrorDiag": "",
[2025-11-23 10:28:26]     "pilotErrorCode": 0,
[2025-11-23 10:28:26]     "pilotErrorDiag": "",
[2025-11-23 10:28:26]  *** Listing of results directory ***
[2025-11-23 10:28:26] total 1313884
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 04:00 pilot3.tar.gz
[2025-11-23 10:28:26] -rwx------ 1 boincer umatlas     36292 Nov 22 04:03 runpilot2-wrapper.sh
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 04:03 queuedata.json
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas       100 Nov 23 03:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 10:28:26] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 03:11 run_atlas
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas       105 Nov 23 03:11 job.xml
[2025-11-23 10:28:26] -rw-r--r-- 2 boincer umatlas 409616144 Nov 23 03:11 EVNT.47483658._000326.pool.root.1
[2025-11-23 10:28:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 03:11 start_atlas.sh
[2025-11-23 10:28:26] drwxrwx--x 2 boincer umatlas      4096 Nov 23 03:11 shared
[2025-11-23 10:28:26] -rw-r--r-- 2 boincer umatlas    590094 Nov 23 03:11 input.tar.gz
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas         0 Nov 23 03:11 boinc_lockfile
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 03:11 pandaJob.out
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas        57 Nov 23 03:11 setup.sh.local
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas    989784 Nov 23 03:11 agis_schedconf.cvmfs.json
[2025-11-23 10:28:26] drwx------ 5 boincer umatlas      4096 Nov 23 03:11 pilot3
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas       532 Nov 23 10:18 boinc_task_state.xml
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas 920179168 Nov 23 10:27 HITS.47556137._003227.pool.root.1
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas      1065 Nov 23 10:27 memory_monitor_summary.json
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas   1526164 Nov 23 10:27 agis_ddmendpoints.agis.ALL.json
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas   2182726 Nov 23 10:27 log.47556137._003227.job.log.tgz.1
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas      8674 Nov 23 10:27 heartbeat.json
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas        95 Nov 23 10:28 pilot_heartbeat.json
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas      5955 Nov 23 10:28 init_data.xml
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 10:28 boinc_mmap_file
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas        29 Nov 23 10:28 wrapper_checkpoint.txt
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas      4746 Nov 23 10:28 pilotlog.txt
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas   3666240 Nov 23 10:28 log.47556137._003227.job.log.1
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas       353 Nov 23 10:28 output.list
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas       620 Nov 23 10:28 runtime_log
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas   5867520 Nov 23 10:28 result.tar.gz
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 10:28 runtime_log.err
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas       670 Nov 23 10:28 Pg7NDmghyg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm24JKDm2xK4So.diag
[2025-11-23 10:28:26] -rw-r--r-- 1 boincer umatlas     21290 Nov 23 10:28 stderr.txt
[2025-11-23 10:28:26] HITS file was successfully produced:
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas 920179168 Nov 23 10:27 shared/HITS.pool.root.1
[2025-11-23 10:28:26]  *** Contents of shared directory: ***
[2025-11-23 10:28:26] total 1304964
[2025-11-23 10:28:26] -rw-r--r-- 2 boincer umatlas 409616144 Nov 23 03:11 ATLAS.root_0
[2025-11-23 10:28:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 03:11 start_atlas.sh
[2025-11-23 10:28:26] -rw-r--r-- 2 boincer umatlas    590094 Nov 23 03:11 input.tar.gz
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas 920179168 Nov 23 10:27 HITS.pool.root.1
[2025-11-23 10:28:26] -rw------- 1 boincer umatlas   5867520 Nov 23 10:28 result.tar.gz
10:28:28 (22645): run_atlas exited; CPU time 292286.230187
10:28:28 (22645): called boinc_finish(0)

</stderr_txt>
]]>

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