Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:51:15 (3094332): wrapper (7.7.26015): starting
06:51:15 (3094332): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 06:51:15] Arguments: --nthreads 9
[2025-11-23 06:51:15] Threads: 9
[2025-11-23 06:51:15] Checking for CVMFS
[2025-11-23 06:51:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 06:51:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 06:51:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 06:51:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 06:51:15] 2.13.3.0 3025293 4595 91560 153207 0 81 12269985 37030912 1932 16776704 0 5120274 99.891 622717 15794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 06:51:15] CVMFS is ok
[2025-11-23 06:51:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 06:51:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 06:51:15] Further information can be found at the LHC@home message board.
[2025-11-23 06:51:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 06:51:15] Checking for apptainer binary...
[2025-11-23 06:51:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 06:51:15] Running /usr/bin/apptainer --version
[2025-11-23 06:51:15] apptainer version 1.4.4-1.el9
[2025-11-23 06:51:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 06:51:15] c-205-37.aglt2.org
[2025-11-23 06:51:15] apptainer works
[2025-11-23 06:51:15] Set ATHENA_PROC_NUMBER=9
[2025-11-23 06:51:15] Set ATHENA_CORE_NUMBER=9
[2025-11-23 06:51:15] Starting ATLAS job with PandaID=6895338415
[2025-11-23 06:51:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:41:27]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:41:27] 2025-11-23 20:40:54,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,887 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 15:41:27] 2025-11-23 20:40:54,902 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.9145312500004
[2025-11-23 15:41:27] 2025-11-23 20:40:54,910 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895338415/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,911 | INFO     | extracted standard info from prmon json
[2025-11-23 15:41:27] 2025-11-23 20:40:54,911 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:41:27] 2025-11-23 20:40:54,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:41:27] 2025-11-23 20:40:54,921 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:41:27] 2025-11-23 20:40:54,923 | INFO     | sum of square deviations: 43852014769.992226
[2025-11-23 15:41:27] 2025-11-23 20:40:54,930 | INFO     | sum of deviations: 628703860915.9236
[2025-11-23 15:41:27] 2025-11-23 20:40:54,931 | INFO     | mean x: 1763914570.0038388
[2025-11-23 15:41:27] 2025-11-23 20:40:54,931 | INFO     | mean y: 3094380.038387716
[2025-11-23 15:41:27] 2025-11-23 20:40:54,931 | INFO     | intersect: -25286049261.45595
[2025-11-23 15:41:27] 2025-11-23 20:40:54,932 | INFO     | chi2: 5.584984079103191
[2025-11-23 15:41:27] 2025-11-23 20:40:54,933 | INFO     | sum of square deviations: 42601554724.992355
[2025-11-23 15:41:27] 2025-11-23 20:40:54,940 | INFO     | sum of deviations: 808876500006.9297
[2025-11-23 15:41:27] 2025-11-23 20:40:54,940 | INFO     | mean x: 1763914417.503876
[2025-11-23 15:41:27] 2025-11-23 20:40:54,940 | INFO     | mean y: 3116335.034883721
[2025-11-23 15:41:27] 2025-11-23 20:40:54,941 | INFO     | intersect: -33488359024.320164
[2025-11-23 15:41:27] 2025-11-23 20:40:54,941 | INFO     | chi2: 2.526535068711811
[2025-11-23 15:41:27] 2025-11-23 20:40:54,942 | INFO     | current chi2=2.526535068711811 (change=54.76200051912217 %)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,943 | INFO     | sum of square deviations: 41375095129.99215
[2025-11-23 15:41:27] 2025-11-23 20:40:54,949 | INFO     | sum of deviations: 849913745275.5753
[2025-11-23 15:41:27] 2025-11-23 20:40:54,949 | INFO     | mean x: 1763914265.0039139
[2025-11-23 15:41:27] 2025-11-23 20:40:54,950 | INFO     | mean y: 3121406.712328767
[2025-11-23 15:41:27] 2025-11-23 20:40:54,950 | INFO     | intersect: -36230631642.17824
[2025-11-23 15:41:27] 2025-11-23 20:40:54,951 | INFO     | chi2: 2.0937996515293054
[2025-11-23 15:41:27] 2025-11-23 20:40:54,951 | INFO     | current chi2=2.0937996515293054 (change=17.12762361945531 %)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,951 | INFO     | right removable region: 510
[2025-11-23 15:41:27] 2025-11-23 20:40:54,952 | INFO     | sum of square deviations: 42601553504.992355
[2025-11-23 15:41:27] 2025-11-23 20:40:54,959 | INFO     | sum of deviations: 483047187578.97675
[2025-11-23 15:41:27] 2025-11-23 20:40:54,959 | INFO     | mean x: 1763914722.503876
[2025-11-23 15:41:27] 2025-11-23 20:40:54,960 | INFO     | mean y: 3112100.511627907
[2025-11-23 15:41:27] 2025-11-23 20:40:54,960 | INFO     | intersect: -19997427216.318653
[2025-11-23 15:41:27] 2025-11-23 20:40:54,961 | INFO     | chi2: 3.613925212514475
[2025-11-23 15:41:27] 2025-11-23 20:40:54,961 | INFO     | current chi2=3.613925212514475 (change=35.29211254090484 %)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,962 | INFO     | sum of square deviations: 41375092689.99215
[2025-11-23 15:41:27] 2025-11-23 20:40:54,969 | INFO     | sum of deviations: 451674602540.1277
[2025-11-23 15:41:27] 2025-11-23 20:40:54,969 | INFO     | mean x: 1763914875.0039139
[2025-11-23 15:41:27] 2025-11-23 20:40:54,969 | INFO     | mean y: 3115997.436399217
[2025-11-23 15:41:27] 2025-11-23 20:40:54,970 | INFO     | intersect: -19252805821.31332
[2025-11-23 15:41:27] 2025-11-23 20:40:54,970 | INFO     | chi2: 3.5915448260801695
[2025-11-23 15:41:27] 2025-11-23 20:40:54,971 | INFO     | current chi2=3.5915448260801695 (change=0.6192819474184365 %)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,971 | INFO     | left removable region: 20
[2025-11-23 15:41:27] 2025-11-23 20:40:54,972 | INFO     | sum of square deviations: 36480796394.4914
[2025-11-23 15:41:27] 2025-11-23 20:40:54,978 | INFO     | sum of deviations: 622362414080.4727
[2025-11-23 15:41:27] 2025-11-23 20:40:54,979 | INFO     | mean x: 1763914844.5040817
[2025-11-23 15:41:27] 2025-11-23 20:40:54,979 | INFO     | mean y: 3149915.763265306
[2025-11-23 15:41:27] 2025-11-23 20:40:54,979 | INFO     | intersect: -30089238665.526283
[2025-11-23 15:41:27] 2025-11-23 20:40:54,980 | INFO     | chi2: 0.06153657468566889
[2025-11-23 15:41:27] 2025-11-23 20:40:54,980 | INFO     | current memory leak: 17.06 B/s (using 490 data points, chi2=0.06)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,981 | INFO     | could have reported an average CPU frequency of 2613 MHz (21 samples)
[2025-11-23 15:41:27] 2025-11-23 20:40:54,982 | INFO     | ..............................
[2025-11-23 15:41:27] 2025-11-23 20:40:54,982 | INFO     | . Timing measurements:
[2025-11-23 15:41:27] 2025-11-23 20:40:54,982 | INFO     | . get job = 0 s
[2025-11-23 15:41:27] 2025-11-23 20:40:54,982 | INFO     | . initial setup = 2 s
[2025-11-23 15:41:27] 2025-11-23 20:40:54,983 | INFO     | . payload setup = 5 s
[2025-11-23 15:41:27] 2025-11-23 20:40:54,983 | INFO     | . stage-in = 0 s
[2025-11-23 15:41:27] 2025-11-23 20:40:54,983 | INFO     | . payload execution = 31734 s
[2025-11-23 15:41:27] 2025-11-23 20:40:54,983 | INFO     | . stage-out = 3 s
[2025-11-23 15:41:27] 2025-11-23 20:40:54,983 | INFO     | . log creation = 0 s
[2025-11-23 15:41:27] 2025-11-23 20:40:54,984 | INFO     | ..............................
[2025-11-23 15:41:27] 2025-11-23 20:40:55,090 | INFO     | 
[2025-11-23 15:41:27] 2025-11-23 20:40:55,091 | INFO     | job summary report
[2025-11-23 15:41:27] 2025-11-23 20:40:55,091 | INFO     | --------------------------------------------------
[2025-11-23 15:41:27] 2025-11-23 20:40:55,091 | INFO     | PanDA job id: 6895338415
[2025-11-23 15:41:27] 2025-11-23 20:40:55,091 | INFO     | task id: 47556149
[2025-11-23 15:41:27] 2025-11-23 20:40:55,091 | INFO     | errors: (none)
[2025-11-23 15:41:27] 2025-11-23 20:40:55,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:41:27] 2025-11-23 20:40:55,092 | INFO     | pilot state: finished 
[2025-11-23 15:41:27] 2025-11-23 20:40:55,092 | INFO     | transexitcode: 0
[2025-11-23 15:41:27] 2025-11-23 20:40:55,092 | INFO     | exeerrorcode: 0
[2025-11-23 15:41:27] 2025-11-23 20:40:55,092 | INFO     | exeerrordiag: 
[2025-11-23 15:41:27] 2025-11-23 20:40:55,093 | INFO     | exitcode: 0
[2025-11-23 15:41:27] 2025-11-23 20:40:55,093 | INFO     | exitmsg: OK
[2025-11-23 15:41:27] 2025-11-23 20:40:55,093 | INFO     | cpuconsumptiontime: 280091 s
[2025-11-23 15:41:27] 2025-11-23 20:40:55,093 | INFO     | nevents: 1000
[2025-11-23 15:41:27] 2025-11-23 20:40:55,093 | INFO     | neventsw: 0
[2025-11-23 15:41:27] 2025-11-23 20:40:55,094 | INFO     | pid: 3106047
[2025-11-23 15:41:27] 2025-11-23 20:40:55,094 | INFO     | pgrp: 3106047
[2025-11-23 15:41:27] 2025-11-23 20:40:55,094 | INFO     | corecount: 9
[2025-11-23 15:41:27] 2025-11-23 20:40:55,094 | INFO     | event service: False
[2025-11-23 15:41:27] 2025-11-23 20:40:55,094 | INFO     | sizes: {0: 2298633, 1: 2298832, 4: 2299094, 11: 2299122, 31743: 2338623, 31747: 2347617, 31749: 2347801, 31754: 2348047}
[2025-11-23 15:41:27] 2025-11-23 20:40:55,094 | INFO     | --------------------------------------------------
[2025-11-23 15:41:27] 2025-11-23 20:40:55,095 | INFO     | 
[2025-11-23 15:41:27] 2025-11-23 20:40:55,095 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 15:41:27] 2025-11-23 20:40:55,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:41:27] 2025-11-23 20:40:55,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:41:27] 2025-11-23 20:40:55,116 | INFO     | job 6895338415 has completed (purged errors)
[2025-11-23 15:41:27] 2025-11-23 20:40:55,116 | INFO     | overall cleanup function is called
[2025-11-23 15:41:27] 2025-11-23 20:40:55,165 | INFO     | PID=3098036 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-23 15:41:27] 2025-11-23 20:40:55,165 | INFO     | .. there are 3 such processes running
[2025-11-23 15:41:27] 2025-11-23 20:40:56,139 | INFO     | --- collectZombieJob: --- 10, [3106047]
[2025-11-23 15:41:27] 2025-11-23 20:40:56,140 | INFO     | zombie collector waiting for pid 3106047
[2025-11-23 15:41:27] 2025-11-23 20:40:56,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:41:27] 2025-11-23 20:40:56,140 | INFO     | collected zombie processes
[2025-11-23 15:41:27] 2025-11-23 20:40:56,140 | INFO     | will attempt to kill all subprocesses of pid=3106047
[2025-11-23 15:41:27] 2025-11-23 20:40:56,331 | INFO     | process IDs to be killed: [3106047] (in reverse order)
[2025-11-23 15:41:27] 2025-11-23 20:40:56,387 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:41:27] 2025-11-23 20:40:56,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:41:27] 2025-11-23 20:40:56,393 | INFO     | did not find any defunct processes belonging to 3106047
[2025-11-23 15:41:27] 2025-11-23 20:40:56,398 | INFO     | did not find any defunct processes belonging to 3106047
[2025-11-23 15:41:27] 2025-11-23 20:40:56,399 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:41:27] 2025-11-23 20:40:56,399 | INFO     | ready for new job
[2025-11-23 15:41:27] 2025-11-23 20:40:56,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:41:27] 2025-11-23 20:40:56,403 | INFO     | ***************************************
[2025-11-23 15:41:27] 2025-11-23 20:40:56,403 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:41:27] 2025-11-23 20:40:56,403 | INFO     | ***************************************
[2025-11-23 15:41:27] 2025-11-23 20:40:56,403 | INFO     | 
[2025-11-23 15:41:27] 2025-11-23 20:40:56,405 | INFO     | architecture information:
[2025-11-23 15:41:27] 2025-11-23 20:40:56,405 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:41:27] 2025-11-23 20:40:56,418 | INFO     | cat /etc/os-release:
[2025-11-23 15:41:27] NAME="CentOS Linux"
[2025-11-23 15:41:27] VERSION="7 (Core)"
[2025-11-23 15:41:27] ID="centos"
[2025-11-23 15:41:27] ID_LIKE="rhel fedora"
[2025-11-23 15:41:27] VERSION_ID="7"
[2025-11-23 15:41:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:41:27] ANSI_COLOR="0;31"
[2025-11-23 15:41:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:41:27] HOME_URL="https://www.centos.org/"
[2025-11-23 15:41:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:41:27] 
[2025-11-23 15:41:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:41:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:41:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:41:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:41:27] 
[2025-11-23 15:41:27] 2025-11-23 20:40:56,418 | INFO     | ***************************************
[2025-11-23 15:41:27] 2025-11-23 20:40:56,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 15:41:27] 2025-11-23 20:40:56,935 | INFO     | sufficient remaining disk space (38815137792 B)
[2025-11-23 15:41:27] 2025-11-23 20:40:56,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:41:27] 2025-11-23 20:40:56,936 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:41:27] 2025-11-23 20:40:56,936 | INFO     | update_server=False
[2025-11-23 15:41:27] 2025-11-23 20:40:56,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:41:27] 2025-11-23 20:40:56,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:41:27] 2025-11-23 20:40:56,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:41:27] 2025-11-23 20:40:56,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:41:27] 2025-11-23 20:40:57,145 | INFO     | all data control threads have been joined
[2025-11-23 15:41:27] 2025-11-23 20:40:57,515 | INFO     | all payload control threads have been joined
[2025-11-23 15:41:27] 2025-11-23 20:40:57,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:41:27] 2025-11-23 20:40:57,780 | INFO     | aborting loop
[2025-11-23 15:41:27] 2025-11-23 20:40:57,941 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:57,942 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,076 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,149 | INFO     | all job control threads have been joined
[2025-11-23 15:41:27] 2025-11-23 20:40:58,150 | INFO     | [data] control thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,155 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,285 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,520 | INFO     | [payload] control thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,739 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,786 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,942 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:58,950 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:59,154 | INFO     | [job] control thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:59,269 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:40:59,418 | INFO     | [job] validate thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:41:00,943 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:41:27] 2025-11-23 20:41:16,581 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:41:27] 2025-11-23 20:41:18,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350518327104)>', '<ExcThread(monitor, started 140349657835264)>']
[2025-11-23 15:41:27] 2025-11-23 20:41:23,219 | INFO     | all workflow threads have been joined
[2025-11-23 15:41:27] 2025-11-23 20:41:23,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:41:27] 2025-11-23 20:41:23,219 | INFO     | traces error code: 0
[2025-11-23 15:41:27] 2025-11-23 20:41:23,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:41:27] 2025-11-23 20:41:27,479 | INFO     | PID=3098036 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 15:41:27] 2025-11-23 20:41:27,479 | INFO     | .. there are 3 such processes running
[2025-11-23 15:41:27] 2025-11-23 20:41:27,480 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:41:27] 2025-11-23 20:41:27,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:41:27] 2025-11-23 20:41:27,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:41:27] 2025-11-23 20:41:27,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:41:27] 2025-11-23 20:41:27,480 | INFO     | [monitor] control thread has ended
[2025-11-23 15:41:27] 2025-11-23 20:41:27,584 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:41:27] 2025-11-23 20:41:27,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:41:27] 2025-11-23 20:41:27,589 [wrapper] pilotpid: 3098036
[2025-11-23 15:41:27] 2025-11-23 20:41:27,591 [wrapper] Pilot exit status: 0
[2025-11-23 15:41:27] 2025-11-23 20:41:27,600 [wrapper] pandaids: 6895338415
[2025-11-23 15:41:27] 2025-11-23 20:41:27,636 [wrapper] cleanup supervisor_pilot 3566291 3098037
[2025-11-23 15:41:27] 2025-11-23 20:41:27,638 [wrapper] Test setup, not cleaning
[2025-11-23 15:41:27] 2025-11-23 20:41:27,641 [wrapper] apfmon messages muted
[2025-11-23 15:41:27] 2025-11-23 20:41:27,643 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:41:27] 2025-11-23 20:41:27,645 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:41:27]  *** Error codes and diagnostics ***
[2025-11-23 15:41:27]     "exeErrorCode": 0,
[2025-11-23 15:41:27]     "exeErrorDiag": "",
[2025-11-23 15:41:27]     "pilotErrorCode": 0,
[2025-11-23 15:41:27]     "pilotErrorDiag": "",
[2025-11-23 15:41:27]  *** Listing of results directory ***
[2025-11-23 15:41:27] total 1313940
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 03:43 pilot3.tar.gz
[2025-11-23 15:41:27] -rwx------. 1 boincer umatlas     36292 Nov 22 03:49 runpilot2-wrapper.sh
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 03:49 queuedata.json
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas       100 Nov 23 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:41:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 06:51 run_atlas
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas       105 Nov 23 06:51 job.xml
[2025-11-23 15:41:27] -rw-r--r--. 2 boincer umatlas 407701659 Nov 23 06:51 EVNT.47483658._001079.pool.root.1
[2025-11-23 15:41:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 06:51 start_atlas.sh
[2025-11-23 15:41:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 06:51 shared
[2025-11-23 15:41:27] -rw-r--r--. 2 boincer umatlas    590103 Nov 23 06:51 input.tar.gz
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas         0 Nov 23 06:51 boinc_lockfile
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 06:51 pandaJob.out
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas    989784 Nov 23 06:51 agis_schedconf.cvmfs.json
[2025-11-23 15:41:27] drwx------. 5 boincer umatlas      4096 Nov 23 06:51 pilot3
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas       532 Nov 23 15:31 boinc_task_state.xml
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas      6530 Nov 23 15:38 init_data.xml
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas 920928924 Nov 23 15:40 HITS.47556149._000656.pool.root.1
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas      1046 Nov 23 15:40 memory_monitor_summary.json
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas        95 Nov 23 15:40 pilot_heartbeat.json
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas   1526164 Nov 23 15:40 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas   1931736 Nov 23 15:40 log.47556149._000656.job.log.tgz.1
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas      8619 Nov 23 15:40 heartbeat.json
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 15:41 boinc_mmap_file
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas        29 Nov 23 15:41 wrapper_checkpoint.txt
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas       822 Nov 23 15:41 pilotlog.txt
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas   4532805 Nov 23 15:41 log.47556149._000656.job.log.1
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas       353 Nov 23 15:41 output.list
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas       620 Nov 23 15:41 runtime_log
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas   6481920 Nov 23 15:41 result.tar.gz
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas      8818 Nov 23 15:41 runtime_log.err
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas       659 Nov 23 15:41 C2ENDmLUyg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDme2HKDm1EleNo.diag
[2025-11-23 15:41:27] -rw-r--r--. 1 boincer umatlas     21410 Nov 23 15:41 stderr.txt
[2025-11-23 15:41:27] HITS file was successfully produced:
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas 920928924 Nov 23 15:40 shared/HITS.pool.root.1
[2025-11-23 15:41:27]  *** Contents of shared directory: ***
[2025-11-23 15:41:27] total 1304428
[2025-11-23 15:41:27] -rw-r--r--. 2 boincer umatlas 407701659 Nov 23 06:51 ATLAS.root_0
[2025-11-23 15:41:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 06:51 start_atlas.sh
[2025-11-23 15:41:27] -rw-r--r--. 2 boincer umatlas    590103 Nov 23 06:51 input.tar.gz
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas 920928924 Nov 23 15:40 HITS.pool.root.1
[2025-11-23 15:41:27] -rw-------. 1 boincer umatlas   6481920 Nov 23 15:41 result.tar.gz
15:41:29 (3094332): run_atlas exited; CPU time 280344.136133
15:41:29 (3094332): called boinc_finish(0)

</stderr_txt>
]]>

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