Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:08:39 (16197): wrapper (7.7.26015): starting
02:08:39 (16197): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 02:08:39] Arguments: --nthreads 12
[2025-11-23 02:08:39] Threads: 12
[2025-11-23 02:08:39] Checking for CVMFS
[2025-11-23 02:08:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 02:08:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 02:08:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 02:08:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 02:08:40] 2.11.2.0 30551 112983 94412 153199 0 81 12348674 20275200 1 130560 0 50168786 99.914 6227317 28648 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 02:08:40] CVMFS is ok
[2025-11-23 02:08:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 02:08:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 02:08:40] Further information can be found at the LHC@home message board.
[2025-11-23 02:08:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 02:08:40] Checking for apptainer binary...
[2025-11-23 02:08:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 02:08:40] Running /usr/bin/apptainer --version
[2025-11-23 02:08:40] apptainer version 1.3.2-1.el7
[2025-11-23 02:08:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 02:08:41] c-205-16.aglt2.org
[2025-11-23 02:08:41] apptainer works
[2025-11-23 02:08:41] Set ATHENA_PROC_NUMBER=12
[2025-11-23 02:08:41] Set ATHENA_CORE_NUMBER=12
[2025-11-23 02:08:41] Starting ATLAS job with PandaID=6895337706
[2025-11-23 02:08:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 09:15:58]  *** The last 200 lines of the pilot log: ***
[2025-11-23 09:15:58] 2025-11-23 14:15:23,480 | INFO     | time since job start (25587s) is within the limit (172800.0s)
[2025-11-23 09:15:58] 2025-11-23 14:15:25,481 | INFO     | time since job start (25589s) is within the limit (172800.0s)
[2025-11-23 09:15:58] 2025-11-23 14:15:25,739 | INFO     | monitor loop #1919: job 0:6895337706 is in state 'finished'
[2025-11-23 09:15:58] 2025-11-23 14:15:25,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,298 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 09:15:58] 2025-11-23 14:15:27,302 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-23 09:15:58] 2025-11-23 14:15:27,304 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895337706/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,304 | INFO     | extracted standard info from prmon json
[2025-11-23 09:15:58] 2025-11-23 14:15:27,304 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 09:15:58] 2025-11-23 14:15:27,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 09:15:58] 2025-11-23 14:15:27,311 | INFO     | fitting pss+swap vs Time
[2025-11-23 09:15:58] 2025-11-23 14:15:27,311 | INFO     | sum of square deviations: 22809629303.608654
[2025-11-23 09:15:58] 2025-11-23 14:15:27,315 | INFO     | sum of deviations: 414559290307.838
[2025-11-23 09:15:58] 2025-11-23 14:15:27,315 | INFO     | mean x: 1763894515.2362769
[2025-11-23 09:15:58] 2025-11-23 14:15:27,315 | INFO     | mean y: 3420748.53699284
[2025-11-23 09:15:58] 2025-11-23 14:15:27,316 | INFO     | intersect: -32054919555.071163
[2025-11-23 09:15:58] 2025-11-23 14:15:27,316 | INFO     | chi2: 5.169286299819438
[2025-11-23 09:15:58] 2025-11-23 14:15:27,317 | INFO     | sum of square deviations: 22002788555.826057
[2025-11-23 09:15:58] 2025-11-23 14:15:27,320 | INFO     | sum of deviations: 560511416174.0867
[2025-11-23 09:15:58] 2025-11-23 14:15:27,320 | INFO     | mean x: 1763894362.7391305
[2025-11-23 09:15:58] 2025-11-23 14:15:27,320 | INFO     | mean y: 3448301.074879227
[2025-11-23 09:15:58] 2025-11-23 14:15:27,321 | INFO     | intersect: -44930989201.330124
[2025-11-23 09:15:58] 2025-11-23 14:15:27,321 | INFO     | chi2: 2.577018623484078
[2025-11-23 09:15:58] 2025-11-23 14:15:27,321 | INFO     | current chi2=2.577018623484078 (change=50.147496694580596 %)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,322 | INFO     | sum of square deviations: 21215203983.03673
[2025-11-23 09:15:58] 2025-11-23 14:15:27,325 | INFO     | sum of deviations: 579372285073.7726
[2025-11-23 09:15:58] 2025-11-23 14:15:27,326 | INFO     | mean x: 1763894210.2420537
[2025-11-23 09:15:58] 2025-11-23 14:15:27,326 | INFO     | mean y: 3451907.6992665036
[2025-11-23 09:15:58] 2025-11-23 14:15:27,326 | INFO     | intersect: -48167257175.912125
[2025-11-23 09:15:58] 2025-11-23 14:15:27,326 | INFO     | chi2: 2.3258493769777058
[2025-11-23 09:15:58] 2025-11-23 14:15:27,327 | INFO     | current chi2=2.3258493769777058 (change=9.746504903670287 %)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,327 | INFO     | right removable region: 408
[2025-11-23 09:15:58] 2025-11-23 14:15:27,327 | INFO     | sum of square deviations: 22002753602.301964
[2025-11-23 09:15:58] 2025-11-23 14:15:27,331 | INFO     | sum of deviations: 286864282498.27765
[2025-11-23 09:15:58] 2025-11-23 14:15:27,331 | INFO     | mean x: 1763894667.736715
[2025-11-23 09:15:58] 2025-11-23 14:15:27,331 | INFO     | mean y: 3444794.277777778
[2025-11-23 09:15:58] 2025-11-23 14:15:27,331 | INFO     | intersect: -22993603093.850742
[2025-11-23 09:15:58] 2025-11-23 14:15:27,332 | INFO     | chi2: 3.0246429342029457
[2025-11-23 09:15:58] 2025-11-23 14:15:27,332 | INFO     | current chi2=3.0246429342029457 (change=41.48819084931327 %)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,332 | INFO     | sum of square deviations: 21215108944.518505
[2025-11-23 09:15:58] 2025-11-23 14:15:27,336 | INFO     | sum of deviations: 251107570582.65305
[2025-11-23 09:15:58] 2025-11-23 14:15:27,336 | INFO     | mean x: 1763894820.2396088
[2025-11-23 09:15:58] 2025-11-23 14:15:27,336 | INFO     | mean y: 3451716.3300733496
[2025-11-23 09:15:58] 2025-11-23 14:15:27,336 | INFO     | intersect: -20874468082.810806
[2025-11-23 09:15:58] 2025-11-23 14:15:27,337 | INFO     | chi2: 2.9616057582108186
[2025-11-23 09:15:58] 2025-11-23 14:15:27,337 | INFO     | current chi2=2.9616057582108186 (change=2.084119592408638 %)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,337 | INFO     | left removable region: 20
[2025-11-23 09:15:58] 2025-11-23 14:15:27,337 | INFO     | sum of square deviations: 18112185952.75
[2025-11-23 09:15:58] 2025-11-23 14:15:27,341 | INFO     | sum of deviations: 360313547070.75
[2025-11-23 09:15:58] 2025-11-23 14:15:27,341 | INFO     | mean x: 1763894789.75
[2025-11-23 09:15:58] 2025-11-23 14:15:27,341 | INFO     | mean y: 3495270.317010309
[2025-11-23 09:15:58] 2025-11-23 14:15:27,341 | INFO     | intersect: -35086426510.10398
[2025-11-23 09:15:58] 2025-11-23 14:15:27,341 | INFO     | chi2: 0.050749908221569925
[2025-11-23 09:15:58] 2025-11-23 14:15:27,342 | INFO     | current memory leak: 19.89 B/s (using 388 data points, chi2=0.05)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,342 | INFO     | could have reported an average CPU frequency of 2355 MHz (18 samples)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,342 | INFO     | ..............................
[2025-11-23 09:15:58] 2025-11-23 14:15:27,342 | INFO     | . Timing measurements:
[2025-11-23 09:15:58] 2025-11-23 14:15:27,342 | INFO     | . get job = 0 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,342 | INFO     | . initial setup = 2 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,343 | INFO     | . payload setup = 8 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,343 | INFO     | . stage-in = 0 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,343 | INFO     | . payload execution = 25550 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,343 | INFO     | . stage-out = 3 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,343 | INFO     | . log creation = 0 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,343 | INFO     | ..............................
[2025-11-23 09:15:58] 2025-11-23 14:15:27,423 | INFO     | 
[2025-11-23 09:15:58] 2025-11-23 14:15:27,423 | INFO     | job summary report
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | --------------------------------------------------
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | PanDA job id: 6895337706
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | task id: 47556137
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | errors: (none)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | pilot state: finished 
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | transexitcode: 0
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | exeerrorcode: 0
[2025-11-23 09:15:58] 2025-11-23 14:15:27,424 | INFO     | exeerrordiag: 
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | exitcode: 0
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | exitmsg: OK
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | cpuconsumptiontime: 293237 s
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | nevents: 1000
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | neventsw: 0
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | pid: 26371
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | pgrp: 26371
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | corecount: 12
[2025-11-23 09:15:58] 2025-11-23 14:15:27,425 | INFO     | event service: False
[2025-11-23 09:15:58] 2025-11-23 14:15:27,426 | INFO     | sizes: {0: 2298755, 5: 2299017, 11: 2299073, 25561: 2336226, 25566: 2345220, 25569: 2345276, 25575: 2345650}
[2025-11-23 09:15:58] 2025-11-23 14:15:27,426 | INFO     | --------------------------------------------------
[2025-11-23 09:15:58] 2025-11-23 14:15:27,426 | INFO     | 
[2025-11-23 09:15:58] 2025-11-23 14:15:27,426 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 09:15:58] 2025-11-23 14:15:27,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 09:15:58] 2025-11-23 14:15:27,452 | INFO     | job 6895337706 has completed (purged errors)
[2025-11-23 09:15:58] 2025-11-23 14:15:27,452 | INFO     | overall cleanup function is called
[2025-11-23 09:15:58] 2025-11-23 14:15:28,467 | INFO     | --- collectZombieJob: --- 10, [26371]
[2025-11-23 09:15:58] 2025-11-23 14:15:28,467 | INFO     | zombie collector waiting for pid 26371
[2025-11-23 09:15:58] 2025-11-23 14:15:28,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 09:15:58] 2025-11-23 14:15:28,467 | INFO     | collected zombie processes
[2025-11-23 09:15:58] 2025-11-23 14:15:28,467 | INFO     | will attempt to kill all subprocesses of pid=26371
[2025-11-23 09:15:58] 2025-11-23 14:15:28,563 | INFO     | process IDs to be killed: [26371] (in reverse order)
[2025-11-23 09:15:58] 2025-11-23 14:15:28,614 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 09:15:58] 2025-11-23 14:15:28,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 09:15:58] 2025-11-23 14:15:28,618 | INFO     | did not find any defunct processes belonging to 26371
[2025-11-23 09:15:58] 2025-11-23 14:15:28,621 | INFO     | did not find any defunct processes belonging to 26371
[2025-11-23 09:15:58] 2025-11-23 14:15:28,623 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 09:15:58] 2025-11-23 14:15:28,624 | INFO     | ready for new job
[2025-11-23 09:15:58] 2025-11-23 14:15:28,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 09:15:58] 2025-11-23 14:15:28,626 | INFO     | ***************************************
[2025-11-23 09:15:58] 2025-11-23 14:15:28,626 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 09:15:58] 2025-11-23 14:15:28,626 | INFO     | ***************************************
[2025-11-23 09:15:58] 2025-11-23 14:15:28,626 | INFO     | 
[2025-11-23 09:15:58] 2025-11-23 14:15:28,626 | INFO     | architecture information:
[2025-11-23 09:15:58] 2025-11-23 14:15:28,627 | INFO     | executing command: cat /etc/os-release
[2025-11-23 09:15:58] 2025-11-23 14:15:28,643 | INFO     | cat /etc/os-release:
[2025-11-23 09:15:58] NAME="CentOS Linux"
[2025-11-23 09:15:58] VERSION="7 (Core)"
[2025-11-23 09:15:58] ID="centos"
[2025-11-23 09:15:58] ID_LIKE="rhel fedora"
[2025-11-23 09:15:58] VERSION_ID="7"
[2025-11-23 09:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 09:15:58] ANSI_COLOR="0;31"
[2025-11-23 09:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 09:15:58] HOME_URL="https://www.centos.org/"
[2025-11-23 09:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 09:15:58] 
[2025-11-23 09:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 09:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 09:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 09:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 09:15:58] 
[2025-11-23 09:15:58] 2025-11-23 14:15:28,644 | INFO     | ***************************************
[2025-11-23 09:15:58] 2025-11-23 14:15:29,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 09:15:58] 2025-11-23 14:15:29,162 | INFO     | sufficient remaining disk space (28390195200 B)
[2025-11-23 09:15:58] 2025-11-23 14:15:29,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 09:15:58] 2025-11-23 14:15:29,162 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 09:15:58] 2025-11-23 14:15:29,163 | INFO     | update_server=False
[2025-11-23 09:15:58] 2025-11-23 14:15:29,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 09:15:58] 2025-11-23 14:15:29,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:15:58] 2025-11-23 14:15:29,176 | INFO     | all data control threads have been joined
[2025-11-23 09:15:58] 2025-11-23 14:15:29,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 09:15:58] 2025-11-23 14:15:29,245 | INFO     | aborting loop
[2025-11-23 09:15:58] 2025-11-23 14:15:29,271 | INFO     | all job control threads have been joined
[2025-11-23 09:15:58] 2025-11-23 14:15:29,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 09:15:58] 2025-11-23 14:15:30,168 | INFO     | [job] retrieve thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,169 | INFO     | [job] queue monitor thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,177 | INFO     | [data] control thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,187 | INFO     | all payload control threads have been joined
[2025-11-23 09:15:58] 2025-11-23 14:15:30,251 | INFO     | [job] job monitor thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,276 | INFO     | [job] control thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,807 | INFO     | [job] validate thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,834 | INFO     | [data] copytool_in thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,907 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:30,956 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:31,192 | INFO     | [payload] control thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:31,199 | INFO     | [payload] validate_post thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:31,468 | INFO     | [payload] failed_post thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:31,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:31,614 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:31,830 | INFO     | [data] copytool_out thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:32,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 09:15:58] 2025-11-23 14:15:36,467 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 09:15:58] 2025-11-23 14:15:37,923 | INFO     | [monitor] cgroup control has ended
[2025-11-23 09:15:58] 2025-11-23 14:15:39,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250058102592)>', '<ExcThread(monitor, started 140249363621632)>']
[2025-11-23 09:15:58] 2025-11-23 14:15:44,731 | INFO     | all workflow threads have been joined
[2025-11-23 09:15:58] 2025-11-23 14:15:44,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 09:15:58] 2025-11-23 14:15:44,732 | INFO     | traces error code: 0
[2025-11-23 09:15:58] 2025-11-23 14:15:44,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 09:15:58] 2025-11-23 14:15:58,670 | INFO     | PID=19877 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 09:15:58] 2025-11-23 14:15:58,671 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 09:15:58] 2025-11-23 14:15:58,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 09:15:58] 2025-11-23 14:15:58,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 09:15:58] 2025-11-23 14:15:58,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 09:15:58] 2025-11-23 14:15:58,672 | INFO     | [monitor] control thread has ended
[2025-11-23 09:15:58] 2025-11-23 14:15:58,764 [wrapper] ==== pilot stdout END ====
[2025-11-23 09:15:58] 2025-11-23 14:15:58,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 09:15:58] 2025-11-23 14:15:58,771 [wrapper] pilotpid: 19877
[2025-11-23 09:15:58] 2025-11-23 14:15:58,775 [wrapper] Pilot exit status: 0
[2025-11-23 09:15:58] 2025-11-23 14:15:58,788 [wrapper] pandaids: 6895337706
[2025-11-23 09:15:58] 2025-11-23 14:15:58,827 [wrapper] cleanup supervisor_pilot   609 19878
[2025-11-23 09:15:58] 2025-11-23 14:15:58,831 [wrapper] Test setup, not cleaning
[2025-11-23 09:15:58] 2025-11-23 14:15:58,835 [wrapper] apfmon messages muted
[2025-11-23 09:15:58] 2025-11-23 14:15:58,839 [wrapper] ==== wrapper stdout END ====
[2025-11-23 09:15:58] 2025-11-23 14:15:58,843 [wrapper] ==== wrapper stderr END ====
[2025-11-23 09:15:58]  *** Error codes and diagnostics ***
[2025-11-23 09:15:58]     "exeErrorCode": 0,
[2025-11-23 09:15:58]     "exeErrorDiag": "",
[2025-11-23 09:15:58]     "pilotErrorCode": 0,
[2025-11-23 09:15:58]     "pilotErrorDiag": "",
[2025-11-23 09:15:58]  *** Listing of results directory ***
[2025-11-23 09:15:58] total 1306460
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 03:29 pilot3.tar.gz
[2025-11-23 09:15:58] -rwx------ 1 boincer umatlas     36292 Nov 22 03:31 runpilot2-wrapper.sh
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 03:31 queuedata.json
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas       100 Nov 23 02:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 09:15:58] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 02:08 run_atlas
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas       105 Nov 23 02:08 job.xml
[2025-11-23 09:15:58] -rw-r--r-- 2 boincer umatlas 411202439 Nov 23 02:08 EVNT.47483658._000317.pool.root.1
[2025-11-23 09:15:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:08 start_atlas.sh
[2025-11-23 09:15:58] drwxrwx--x 2 boincer umatlas      4096 Nov 23 02:08 shared
[2025-11-23 09:15:58] -rw-r--r-- 2 boincer umatlas    590096 Nov 23 02:08 input.tar.gz
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas         0 Nov 23 02:08 boinc_lockfile
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 02:08 pandaJob.out
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas        57 Nov 23 02:08 setup.sh.local
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas    989784 Nov 23 02:08 agis_schedconf.cvmfs.json
[2025-11-23 09:15:58] drwx------ 5 boincer umatlas      4096 Nov 23 02:08 pilot3
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas       532 Nov 23 09:07 boinc_task_state.xml
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas      5956 Nov 23 09:12 init_data.xml
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas 911161418 Nov 23 09:14 HITS.47556137._003138.pool.root.1
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas      1062 Nov 23 09:15 memory_monitor_summary.json
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas   1526164 Nov 23 09:15 agis_ddmendpoints.agis.ALL.json
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas   2167825 Nov 23 09:15 log.47556137._003138.job.log.tgz.1
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas      8666 Nov 23 09:15 heartbeat.json
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 09:15 boinc_mmap_file
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas        29 Nov 23 09:15 wrapper_checkpoint.txt
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas        95 Nov 23 09:15 pilot_heartbeat.json
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas       745 Nov 23 09:15 pilotlog.txt
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas   3594584 Nov 23 09:15 log.47556137._003138.job.log.1
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas       353 Nov 23 09:15 output.list
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas       620 Nov 23 09:15 runtime_log
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas   5785600 Nov 23 09:15 result.tar.gz
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas       670 Nov 23 09:15 ZwuKDmWCyg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm43JKDmzMGfmm.diag
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas      9345 Nov 23 09:15 runtime_log.err
[2025-11-23 09:15:58] -rw-r--r-- 1 boincer umatlas     21316 Nov 23 09:15 stderr.txt
[2025-11-23 09:15:58] HITS file was successfully produced:
[2025-11-23 09:15:58] -rw------- 1 boincer umatlas 911161418 Nov 23 09:14 shared/HITS.pool.root.1
[2025-11-23 09:15:58]  *** Contents of shared directory: ***
[2025-11-23 09:15:59] total 1297628
[2025-11-23 09:15:59] -rw-r--r-- 2 boincer umatlas 411202439 Nov 23 02:08 ATLAS.root_0
[2025-11-23 09:15:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 02:08 start_atlas.sh
[2025-11-23 09:15:59] -rw-r--r-- 2 boincer umatlas    590096 Nov 23 02:08 input.tar.gz
[2025-11-23 09:15:59] -rw------- 1 boincer umatlas 911161418 Nov 23 09:14 HITS.pool.root.1
[2025-11-23 09:15:59] -rw------- 1 boincer umatlas   5785600 Nov 23 09:15 result.tar.gz
09:16:00 (16197): run_atlas exited; CPU time 286374.867786
09:16:00 (16197): called boinc_finish(0)

</stderr_txt>
]]>

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