Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:36:46 (2305189): wrapper (7.7.26015): starting
07:36:46 (2305189): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 07:36:46] Arguments: --nthreads 3
[2025-11-23 07:36:46] Threads: 3
[2025-11-23 07:36:46] Checking for CVMFS
[2025-11-23 07:36:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 07:36:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 07:36:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 07:36:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 07:36:46] 2.9.2.0 1731473 451 66060 153199 1 108 34807491 36864001 0 130560 0 1712950 99.998 17015 10837 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 07:36:46] CVMFS is ok
[2025-11-23 07:36:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:36:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:36:46] Further information can be found at the LHC@home message board.
[2025-11-23 07:36:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:36:46] Checking for apptainer binary...
[2025-11-23 07:36:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 07:36:46] Running /usr/bin/apptainer --version
[2025-11-23 07:36:46] apptainer version 1.4.1-1.1
[2025-11-23 07:36:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:36:46] thA335
[2025-11-23 07:36:46] apptainer works
[2025-11-23 07:36:46] Set ATHENA_PROC_NUMBER=3
[2025-11-23 07:36:46] Set ATHENA_CORE_NUMBER=3
[2025-11-23 07:36:46] Starting ATLAS job with PandaID=6895338354
[2025-11-23 07:36:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 07:41:04]  *** The last 200 lines of the pilot log: ***
[2025-11-23 07:41:04] 2025-11-23 06:40:12,348 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 07:41:04] 2025-11-23 06:40:12,361 | INFO     | sufficient remaining disk space (827647328256 B)
[2025-11-23 07:41:04] 2025-11-23 06:40:12,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 07:41:04] 2025-11-23 06:40:12,362 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 07:41:04] 2025-11-23 06:40:12,362 | INFO     | update_server=False
[2025-11-23 07:41:04] 2025-11-23 06:40:12,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 07:41:04] 2025-11-23 06:40:12,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:41:04] 2025-11-23 06:40:12,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 07:41:04] 2025-11-23 06:40:12,362 | INFO     | aborting loop
[2025-11-23 07:41:04] 2025-11-23 06:40:12,400 | INFO     | all job control threads have been joined
[2025-11-23 07:41:04] 2025-11-23 06:40:12,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 07:41:04] 2025-11-23 06:40:13,204 | INFO     | all data control threads have been joined
[2025-11-23 07:41:04] 2025-11-23 06:40:13,368 | INFO     | [job] retrieve thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:13,368 | INFO     | [job] job monitor thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:13,369 | INFO     | [job] queue monitor thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:13,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:13,406 | INFO     | [job] control thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:13,561 | INFO     | all payload control threads have been joined
[2025-11-23 07:41:04] 2025-11-23 06:40:13,795 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,159 | INFO     | [payload] validate_post thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,210 | INFO     | [data] control thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,537 | INFO     | [job] validate thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,567 | INFO     | [payload] control thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,603 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,671 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,685 | INFO     | [payload] failed_post thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,754 | INFO     | [data] copytool_in thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:14,800 | INFO     | [data] copytool_out thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:15,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 07:41:04] 2025-11-23 06:40:19,229 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 07:41:04] 2025-11-23 06:40:42,671 | INFO     | PID=2308922 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 07:41:04] 2025-11-23 06:40:42,671 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 07:41:04] 2025-11-23 06:40:42,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 07:41:04] 2025-11-23 06:40:42,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 07:41:04] 2025-11-23 06:40:57,815 | INFO     | [monitor] cgroup control has ended
[2025-11-23 07:41:04] 2025-11-23 06:40:58,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140311125727040)>', '<ExcThread(monitor, started 140310231361280)>']
[2025-11-23 07:41:04] 2025-11-23 06:40:59,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 07:41:04] 2025-11-23 06:40:59,763 | INFO     | [monitor] control thread has ended
[2025-11-23 07:41:04] 2025-11-23 06:41:03,978 | INFO     | all workflow threads have been joined
[2025-11-23 07:41:04] 2025-11-23 06:41:03,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 07:41:04] 2025-11-23 06:41:03,979 | INFO     | traces error code: 0
[2025-11-23 07:41:04] 2025-11-23 06:41:03,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 07:41:04] 2025-11-23 06:41:04,026 [wrapper] ==== pilot stdout END ====
[2025-11-23 07:41:04] 2025-11-23 06:41:04,029 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 07:41:04] 2025-11-23 06:41:04,032 [wrapper] pilotpid: 2308922
[2025-11-23 07:41:04] 2025-11-23 06:41:04,035 [wrapper] Pilot exit status: 0
[2025-11-23 07:41:04] 2025-11-23 06:41:04,043 [wrapper] pandaids: 6895338354
[2025-11-23 07:41:04] 2025-11-23 06:41:04,059 [wrapper] cleanup supervisor_pilot 2308928 2308923
[2025-11-23 07:41:04] 2025-11-23 06:41:04,061 [wrapper] Test setup, not cleaning
[2025-11-23 07:41:04] 2025-11-23 06:41:04,064 [wrapper] apfmon messages muted
[2025-11-23 07:41:04] 2025-11-23 06:41:04,067 [wrapper] ==== wrapper stdout END ====
[2025-11-23 07:41:04] 2025-11-23 06:41:04,069 [wrapper] ==== wrapper stderr END ====
[2025-11-23 07:41:04]  *** Error codes and diagnostics ***
[2025-11-23 07:41:04]     "exeErrorCode": 65,
[2025-11-23 07:41:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 07:41:04]     "pilotErrorCode": 1305,
[2025-11-23 07:41:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 07:41:04]  *** Listing of results directory ***
[2025-11-23 07:41:04] total 403512
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc    576529 Nov 22 09:40 pilot3.tar.gz
[2025-11-23 07:41:04] -rwx------ 1 boinc boinc     36292 Nov 22 09:42 runpilot2-wrapper.sh
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc      5112 Nov 22 09:42 queuedata.json
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc       100 Nov 23 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 07:41:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 07:36 run_atlas
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc       105 Nov 23 07:36 job.xml
[2025-11-23 07:41:04] -rw-r--r-- 2 boinc boinc 408998784 Nov 23 07:36 EVNT.47483658._000319.pool.root.1
[2025-11-23 07:41:04] -rw-r--r-- 2 boinc boinc    590095 Nov 23 07:36 input.tar.gz
[2025-11-23 07:41:04] -rw-r--r-- 2 boinc boinc     15847 Nov 23 07:36 start_atlas.sh
[2025-11-23 07:41:04] drwxrwx--x 2 boinc boinc      4096 Nov 23 07:36 shared
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc         0 Nov 23 07:36 boinc_setup_complete
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc      6194 Nov 23 07:36 init_data.xml
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc         0 Nov 23 07:36 boinc_lockfile
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc      2784 Nov 23 07:36 pandaJob.out
[2025-11-23 07:41:04] -rw------- 1 boinc boinc    989784 Nov 23 07:36 agis_schedconf.cvmfs.json
[2025-11-23 07:41:04] -rw------- 1 boinc boinc   1526164 Nov 23 07:36 agis_ddmendpoints.agis.ALL.json
[2025-11-23 07:41:04] drwx------ 5 boinc boinc      4096 Nov 23 07:36 pilot3
[2025-11-23 07:41:04] -rw------- 1 boinc boinc       961 Nov 23 07:38 memory_monitor_summary.json
[2025-11-23 07:41:04] -rw------- 1 boinc boinc     55743 Nov 23 07:38 log.47556137._003159.job.log.tgz.1
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc       522 Nov 23 07:38 boinc_task_state.xml
[2025-11-23 07:41:04] -rw------- 1 boinc boinc        95 Nov 23 07:39 pilot_heartbeat.json
[2025-11-23 07:41:04] -rw------- 1 boinc boinc      8402 Nov 23 07:40 heartbeat.json
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc      8192 Nov 23 07:40 boinc_mmap_file
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc        22 Nov 23 07:40 wrapper_checkpoint.txt
[2025-11-23 07:41:04] -rw------- 1 boinc boinc      4752 Nov 23 07:41 pilotlog.txt
[2025-11-23 07:41:04] -rw------- 1 boinc boinc     93513 Nov 23 07:41 log.47556137._003159.job.log.1
[2025-11-23 07:41:04] -rw------- 1 boinc boinc       186 Nov 23 07:41 output.list
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc       620 Nov 23 07:41 runtime_log
[2025-11-23 07:41:04] -rw------- 1 boinc boinc    163840 Nov 23 07:41 result.tar.gz
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc      8744 Nov 23 07:41 runtime_log.err
[2025-11-23 07:41:04] -rw------- 1 boinc boinc       649 Nov 23 07:41 iLGKDmQNyg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJ2HKDmdrAa4m.diag
[2025-11-23 07:41:04] -rw-r--r-- 1 boinc boinc      8239 Nov 23 07:41 stderr.txt
[2025-11-23 07:41:04] No HITS result produced
[2025-11-23 07:41:04]  *** Contents of shared directory: ***
[2025-11-23 07:41:04] total 400176
[2025-11-23 07:41:04] -rw-r--r-- 2 boinc boinc 408998784 Nov 23 07:36 ATLAS.root_0
[2025-11-23 07:41:04] -rw-r--r-- 2 boinc boinc    590095 Nov 23 07:36 input.tar.gz
[2025-11-23 07:41:04] -rw-r--r-- 2 boinc boinc     15847 Nov 23 07:36 start_atlas.sh
[2025-11-23 07:41:04] -rw------- 1 boinc boinc    163840 Nov 23 07:41 result.tar.gz
07:41:05 (2305189): run_atlas exited; CPU time 31.753210
07:41:05 (2305189): called boinc_finish(0)

</stderr_txt>
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