Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:45:25 (5592): wrapper (7.7.26015): starting
03:45:25 (5592): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 03:45:25] Arguments: --nthreads 8
[2025-11-23 03:45:25] Threads: 8
[2025-11-23 03:45:25] Checking for CVMFS
[2025-11-23 03:45:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 03:45:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 03:45:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 03:45:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 03:45:26] 2.11.2.0 2831 38511 82532 153202 3 81 10433977 20275201 1 130560 0 4337232 99.542 2614720 24646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 03:45:26] CVMFS is ok
[2025-11-23 03:45:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 03:45:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 03:45:26] Further information can be found at the LHC@home message board.
[2025-11-23 03:45:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:45:26] Checking for apptainer binary...
[2025-11-23 03:45:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 03:45:26] Running /usr/bin/apptainer --version
[2025-11-23 03:45:26] apptainer version 1.3.2-1.el7
[2025-11-23 03:45:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:45:28] c-204-31.aglt2.org
[2025-11-23 03:45:28] apptainer works
[2025-11-23 03:45:28] Set ATHENA_PROC_NUMBER=8
[2025-11-23 03:45:28] Set ATHENA_CORE_NUMBER=8
[2025-11-23 03:45:28] Starting ATLAS job with PandaID=6895338418
[2025-11-23 03:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 16:03:09]  *** The last 200 lines of the pilot log: ***
[2025-11-23 16:03:09] 2025-11-23 21:02:35,488 | INFO     | monitor loop #3244: job 0:6895338418 is in state 'finished'
[2025-11-23 16:03:09] 2025-11-23 21:02:35,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 16:03:09] 2025-11-23 21:02:35,524 | INFO     | time since job start (44209s) is within the limit (172800.0s)
[2025-11-23 16:03:09] 2025-11-23 21:02:36,645 | INFO     | PID=9418 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 16:03:09] 2025-11-23 21:02:37,185 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 16:03:09] 2025-11-23 21:02:37,189 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-23 16:03:09] 2025-11-23 21:02:37,191 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895338418/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,191 | INFO     | extracted standard info from prmon json
[2025-11-23 16:03:09] 2025-11-23 21:02:37,191 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 16:03:09] 2025-11-23 21:02:37,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 16:03:09] 2025-11-23 21:02:37,203 | INFO     | fitting pss+swap vs Time
[2025-11-23 16:03:09] 2025-11-23 21:02:37,204 | INFO     | sum of square deviations: 117677376316.56781
[2025-11-23 16:03:09] 2025-11-23 21:02:37,215 | INFO     | sum of deviations: 816408454181.6006
[2025-11-23 16:03:09] 2025-11-23 21:02:37,215 | INFO     | mean x: 1763909630.1837018
[2025-11-23 16:03:09] 2025-11-23 21:02:37,215 | INFO     | mean y: 3156436.627071823
[2025-11-23 16:03:09] 2025-11-23 21:02:37,215 | INFO     | intersect: -12234291232.331257
[2025-11-23 16:03:09] 2025-11-23 21:02:37,216 | INFO     | chi2: 5.814818580492723
[2025-11-23 16:03:09] 2025-11-23 21:02:37,217 | INFO     | sum of square deviations: 115256253984.21423
[2025-11-23 16:03:09] 2025-11-23 21:02:37,237 | INFO     | sum of deviations: 1069232223463.83
[2025-11-23 16:03:09] 2025-11-23 21:02:37,237 | INFO     | mean x: 1763909477.6884563
[2025-11-23 16:03:09] 2025-11-23 21:02:37,237 | INFO     | mean y: 3172354.2447844227
[2025-11-23 16:03:09] 2025-11-23 21:02:37,238 | INFO     | intersect: -16360615185.441053
[2025-11-23 16:03:09] 2025-11-23 21:02:37,238 | INFO     | chi2: 2.862191491030502
[2025-11-23 16:03:09] 2025-11-23 21:02:37,238 | INFO     | current chi2=2.862191491030502 (change=50.77763043833481 %)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,239 | INFO     | sum of square deviations: 112868574139.32736
[2025-11-23 16:03:09] 2025-11-23 21:02:37,250 | INFO     | sum of deviations: 1115474823366.58
[2025-11-23 16:03:09] 2025-11-23 21:02:37,250 | INFO     | mean x: 1763909325.1932774
[2025-11-23 16:03:09] 2025-11-23 21:02:37,250 | INFO     | mean y: 3175297.495798319
[2025-11-23 16:03:09] 2025-11-23 21:02:37,250 | INFO     | intersect: -17429457815.471428
[2025-11-23 16:03:09] 2025-11-23 21:02:37,251 | INFO     | chi2: 2.6331251151637116
[2025-11-23 16:03:09] 2025-11-23 21:02:37,251 | INFO     | current chi2=2.6331251151637116 (change=8.003181358921504 %)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,251 | INFO     | right removable region: 713
[2025-11-23 16:03:09] 2025-11-23 21:02:37,252 | INFO     | sum of square deviations: 115255952034.21413
[2025-11-23 16:03:09] 2025-11-23 21:02:37,262 | INFO     | sum of deviations: 589068172575.3105
[2025-11-23 16:03:09] 2025-11-23 21:02:37,263 | INFO     | mean x: 1763909782.6884563
[2025-11-23 16:03:09] 2025-11-23 21:02:37,263 | INFO     | mean y: 3170730.6397774685
[2025-11-23 16:03:09] 2025-11-23 21:02:37,263 | INFO     | intersect: -9012095673.715223
[2025-11-23 16:03:09] 2025-11-23 21:02:37,264 | INFO     | chi2: 3.339627506682654
[2025-11-23 16:03:09] 2025-11-23 21:02:37,264 | INFO     | current chi2=3.339627506682654 (change=42.56695268385023 %)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,265 | INFO     | sum of square deviations: 112868058080.09547
[2025-11-23 16:03:09] 2025-11-23 21:02:37,275 | INFO     | sum of deviations: 544904602286.8561
[2025-11-23 16:03:09] 2025-11-23 21:02:37,275 | INFO     | mean x: 1763909935.1904762
[2025-11-23 16:03:09] 2025-11-23 21:02:37,275 | INFO     | mean y: 3173549.3025210085
[2025-11-23 16:03:09] 2025-11-23 21:02:37,275 | INFO     | intersect: -8512633828.39439
[2025-11-23 16:03:09] 2025-11-23 21:02:37,276 | INFO     | chi2: 3.2991592275220825
[2025-11-23 16:03:09] 2025-11-23 21:02:37,276 | INFO     | current chi2=3.2991592275220825 (change=1.211760266065421 %)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,276 | INFO     | left removable region: 20
[2025-11-23 16:03:09] 2025-11-23 21:02:37,277 | INFO     | sum of square deviations: 103199400357.57042
[2025-11-23 16:03:09] 2025-11-23 21:02:37,287 | INFO     | sum of deviations: 791533436720.6971
[2025-11-23 16:03:09] 2025-11-23 21:02:37,287 | INFO     | mean x: 1763909904.6998558
[2025-11-23 16:03:09] 2025-11-23 21:02:37,287 | INFO     | mean y: 3196084.9696969697
[2025-11-23 16:03:09] 2025-11-23 21:02:37,287 | INFO     | intersect: -13525890945.528088
[2025-11-23 16:03:09] 2025-11-23 21:02:37,288 | INFO     | chi2: 0.0828455285426386
[2025-11-23 16:03:09] 2025-11-23 21:02:37,288 | INFO     | current memory leak: 7.67 B/s (using 693 data points, chi2=0.08)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,289 | INFO     | could have reported an average CPU frequency of 2161 MHz (28 samples)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,289 | INFO     | ..............................
[2025-11-23 16:03:09] 2025-11-23 21:02:37,289 | INFO     | . Timing measurements:
[2025-11-23 16:03:09] 2025-11-23 21:02:37,289 | INFO     | . get job = 0 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,289 | INFO     | . initial setup = 2 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,290 | INFO     | . payload setup = 9 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,290 | INFO     | . stage-in = 0 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,290 | INFO     | . payload execution = 44169 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,290 | INFO     | . stage-out = 3 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,290 | INFO     | . log creation = 0 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,290 | INFO     | ..............................
[2025-11-23 16:03:09] 2025-11-23 21:02:37,379 | INFO     | 
[2025-11-23 16:03:09] 2025-11-23 21:02:37,380 | INFO     | job summary report
[2025-11-23 16:03:09] 2025-11-23 21:02:37,380 | INFO     | --------------------------------------------------
[2025-11-23 16:03:09] 2025-11-23 21:02:37,380 | INFO     | PanDA job id: 6895338418
[2025-11-23 16:03:09] 2025-11-23 21:02:37,380 | INFO     | task id: 47556149
[2025-11-23 16:03:09] 2025-11-23 21:02:37,380 | INFO     | errors: (none)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 16:03:09] 2025-11-23 21:02:37,381 | INFO     | pilot state: finished 
[2025-11-23 16:03:09] 2025-11-23 21:02:37,381 | INFO     | transexitcode: 0
[2025-11-23 16:03:09] 2025-11-23 21:02:37,381 | INFO     | exeerrorcode: 0
[2025-11-23 16:03:09] 2025-11-23 21:02:37,381 | INFO     | exeerrordiag: 
[2025-11-23 16:03:09] 2025-11-23 21:02:37,381 | INFO     | exitcode: 0
[2025-11-23 16:03:09] 2025-11-23 21:02:37,382 | INFO     | exitmsg: OK
[2025-11-23 16:03:09] 2025-11-23 21:02:37,382 | INFO     | cpuconsumptiontime: 342574 s
[2025-11-23 16:03:09] 2025-11-23 21:02:37,382 | INFO     | nevents: 1000
[2025-11-23 16:03:09] 2025-11-23 21:02:37,382 | INFO     | neventsw: 0
[2025-11-23 16:03:09] 2025-11-23 21:02:37,382 | INFO     | pid: 15855
[2025-11-23 16:03:09] 2025-11-23 21:02:37,382 | INFO     | pgrp: 15855
[2025-11-23 16:03:09] 2025-11-23 21:02:37,383 | INFO     | corecount: 8
[2025-11-23 16:03:09] 2025-11-23 21:02:37,383 | INFO     | event service: False
[2025-11-23 16:03:09] 2025-11-23 21:02:37,383 | INFO     | sizes: {0: 2298754, 6: 2299016, 11: 2299044, 44181: 2344689, 44185: 2353739, 44193: 2353929}
[2025-11-23 16:03:09] 2025-11-23 21:02:37,383 | INFO     | --------------------------------------------------
[2025-11-23 16:03:09] 2025-11-23 21:02:37,383 | INFO     | 
[2025-11-23 16:03:09] 2025-11-23 21:02:37,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 16:03:09] 2025-11-23 21:02:37,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 16:03:09] 2025-11-23 21:02:37,418 | INFO     | job 6895338418 has completed (purged errors)
[2025-11-23 16:03:09] 2025-11-23 21:02:37,418 | INFO     | overall cleanup function is called
[2025-11-23 16:03:09] 2025-11-23 21:02:38,433 | INFO     | --- collectZombieJob: --- 10, [15855]
[2025-11-23 16:03:09] 2025-11-23 21:02:38,433 | INFO     | zombie collector waiting for pid 15855
[2025-11-23 16:03:09] 2025-11-23 21:02:38,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 16:03:09] 2025-11-23 21:02:38,433 | INFO     | collected zombie processes
[2025-11-23 16:03:09] 2025-11-23 21:02:38,434 | INFO     | will attempt to kill all subprocesses of pid=15855
[2025-11-23 16:03:09] 2025-11-23 21:02:38,526 | INFO     | process IDs to be killed: [15855] (in reverse order)
[2025-11-23 16:03:09] 2025-11-23 21:02:38,584 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 16:03:09] 2025-11-23 21:02:38,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 16:03:09] 2025-11-23 21:02:38,589 | INFO     | did not find any defunct processes belonging to 15855
[2025-11-23 16:03:09] 2025-11-23 21:02:38,592 | INFO     | did not find any defunct processes belonging to 15855
[2025-11-23 16:03:09] 2025-11-23 21:02:38,595 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 16:03:09] 2025-11-23 21:02:38,595 | INFO     | ready for new job
[2025-11-23 16:03:09] 2025-11-23 21:02:38,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 16:03:09] 2025-11-23 21:02:38,598 | INFO     | ***************************************
[2025-11-23 16:03:09] 2025-11-23 21:02:38,598 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 16:03:09] 2025-11-23 21:02:38,599 | INFO     | ***************************************
[2025-11-23 16:03:09] 2025-11-23 21:02:38,599 | INFO     | 
[2025-11-23 16:03:09] 2025-11-23 21:02:38,599 | INFO     | architecture information:
[2025-11-23 16:03:09] 2025-11-23 21:02:38,600 | INFO     | executing command: cat /etc/os-release
[2025-11-23 16:03:09] 2025-11-23 21:02:38,618 | INFO     | cat /etc/os-release:
[2025-11-23 16:03:09] NAME="CentOS Linux"
[2025-11-23 16:03:09] VERSION="7 (Core)"
[2025-11-23 16:03:09] ID="centos"
[2025-11-23 16:03:09] ID_LIKE="rhel fedora"
[2025-11-23 16:03:09] VERSION_ID="7"
[2025-11-23 16:03:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 16:03:09] ANSI_COLOR="0;31"
[2025-11-23 16:03:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 16:03:09] HOME_URL="https://www.centos.org/"
[2025-11-23 16:03:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 16:03:09] 
[2025-11-23 16:03:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 16:03:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 16:03:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 16:03:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 16:03:09] 
[2025-11-23 16:03:09] 2025-11-23 21:02:38,618 | INFO     | ***************************************
[2025-11-23 16:03:09] 2025-11-23 21:02:39,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 16:03:09] 2025-11-23 21:02:39,141 | INFO     | sufficient remaining disk space (17436770304 B)
[2025-11-23 16:03:09] 2025-11-23 21:02:39,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 16:03:09] 2025-11-23 21:02:39,142 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 16:03:09] 2025-11-23 21:02:39,142 | INFO     | update_server=False
[2025-11-23 16:03:09] 2025-11-23 21:02:39,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 16:03:09] 2025-11-23 21:02:39,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:03:09] 2025-11-23 21:02:39,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 16:03:09] 2025-11-23 21:02:39,143 | INFO     | aborting loop
[2025-11-23 16:03:09] 2025-11-23 21:02:39,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 16:03:09] 2025-11-23 21:02:39,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 16:03:09] 2025-11-23 21:02:40,125 | INFO     | all job control threads have been joined
[2025-11-23 16:03:09] 2025-11-23 21:02:40,148 | INFO     | [job] retrieve thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:40,149 | INFO     | [job] queue monitor thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:40,149 | INFO     | [job] job monitor thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:40,154 | INFO     | all data control threads have been joined
[2025-11-23 16:03:09] 2025-11-23 21:02:40,406 | INFO     | [payload] failed_post thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:40,490 | INFO     | [payload] validate_post thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:40,613 | INFO     | all payload control threads have been joined
[2025-11-23 16:03:09] 2025-11-23 21:02:40,812 | INFO     | [job] validate thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:40,853 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:40,996 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:41,067 | INFO     | [data] copytool_in thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:41,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:41,127 | INFO     | [job] control thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:41,160 | INFO     | [data] control thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:41,379 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:41,413 | INFO     | [data] copytool_out thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:41,619 | INFO     | [payload] control thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:43,497 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 16:03:09] 2025-11-23 21:02:59,233 | INFO     | [monitor] cgroup control has ended
[2025-11-23 16:03:09] 2025-11-23 21:02:59,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651179140928)>', '<ExcThread(monitor, started 139650517690112)>']
[2025-11-23 16:03:09] 2025-11-23 21:03:04,396 | INFO     | all workflow threads have been joined
[2025-11-23 16:03:09] 2025-11-23 21:03:04,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 16:03:09] 2025-11-23 21:03:04,397 | INFO     | traces error code: 0
[2025-11-23 16:03:09] 2025-11-23 21:03:04,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 16:03:09] 2025-11-23 21:03:08,858 | INFO     | PID=9418 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-23 16:03:09] 2025-11-23 21:03:08,859 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 16:03:09] 2025-11-23 21:03:08,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 16:03:09] 2025-11-23 21:03:08,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 16:03:09] 2025-11-23 21:03:08,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 16:03:09] 2025-11-23 21:03:08,860 | INFO     | [monitor] control thread has ended
[2025-11-23 16:03:09] 2025-11-23 21:03:08,968 [wrapper] ==== pilot stdout END ====
[2025-11-23 16:03:09] 2025-11-23 21:03:08,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 16:03:09] 2025-11-23 21:03:08,976 [wrapper] pilotpid: 9418
[2025-11-23 16:03:09] 2025-11-23 21:03:08,981 [wrapper] Pilot exit status: 0
[2025-11-23 16:03:09] 2025-11-23 21:03:08,997 [wrapper] pandaids: 6895338418
[2025-11-23 16:03:09] 2025-11-23 21:03:09,043 [wrapper] cleanup supervisor_pilot 29118 9419
[2025-11-23 16:03:09] 2025-11-23 21:03:09,048 [wrapper] Test setup, not cleaning
[2025-11-23 16:03:09] 2025-11-23 21:03:09,053 [wrapper] apfmon messages muted
[2025-11-23 16:03:09] 2025-11-23 21:03:09,057 [wrapper] ==== wrapper stdout END ====
[2025-11-23 16:03:09] 2025-11-23 21:03:09,062 [wrapper] ==== wrapper stderr END ====
[2025-11-23 16:03:09]  *** Error codes and diagnostics ***
[2025-11-23 16:03:09]     "exeErrorCode": 0,
[2025-11-23 16:03:09]     "exeErrorDiag": "",
[2025-11-23 16:03:09]     "pilotErrorCode": 0,
[2025-11-23 16:03:09]     "pilotErrorDiag": "",
[2025-11-23 16:03:09]  *** Listing of results directory ***
[2025-11-23 16:03:09] total 1320196
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 03:43 pilot3.tar.gz
[2025-11-23 16:03:09] -rwx------ 1 boincer umatlas     36292 Nov 22 03:49 runpilot2-wrapper.sh
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 03:49 queuedata.json
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas       100 Nov 23 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 16:03:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 03:45 run_atlas
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas       105 Nov 23 03:45 job.xml
[2025-11-23 16:03:09] -rw-r--r-- 2 boincer umatlas 407701659 Nov 23 03:45 EVNT.47483658._001079.pool.root.1
[2025-11-23 16:03:09] drwxrwx--x 2 boincer umatlas      4096 Nov 23 03:45 shared
[2025-11-23 16:03:09] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 03:45 input.tar.gz
[2025-11-23 16:03:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 03:45 start_atlas.sh
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas         0 Nov 23 03:45 boinc_lockfile
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 03:45 pandaJob.out
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas        57 Nov 23 03:45 setup.sh.local
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas    989784 Nov 23 03:45 agis_schedconf.cvmfs.json
[2025-11-23 16:03:09] drwx------ 5 boincer umatlas      4096 Nov 23 03:45 pilot3
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas       532 Nov 23 15:52 boinc_task_state.xml
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas 924167997 Nov 23 16:01 HITS.47556149._000659.pool.root.1
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas      1064 Nov 23 16:02 memory_monitor_summary.json
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas   1526164 Nov 23 16:02 agis_ddmendpoints.agis.ALL.json
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas   1969314 Nov 23 16:02 log.47556149._000659.job.log.tgz.1
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 16:02 init_data.xml
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas      8658 Nov 23 16:02 heartbeat.json
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 16:03 boinc_mmap_file
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas       744 Nov 23 16:03 pilotlog.txt
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas        95 Nov 23 16:03 pilot_heartbeat.json
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas        29 Nov 23 16:03 wrapper_checkpoint.txt
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas   6078114 Nov 23 16:03 log.47556149._000659.job.log.1
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas       353 Nov 23 16:03 output.list
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas       620 Nov 23 16:03 runtime_log
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas   8069120 Nov 23 16:03 result.tar.gz
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 16:03 runtime_log.err
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas       668 Nov 23 16:03 HfKNDmLUyg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmh2HKDmJsrDKm.diag
[2025-11-23 16:03:09] -rw-r--r-- 1 boincer umatlas     21383 Nov 23 16:03 stderr.txt
[2025-11-23 16:03:09] HITS file was successfully produced:
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas 924167997 Nov 23 16:01 shared/HITS.pool.root.1
[2025-11-23 16:03:09]  *** Contents of shared directory: ***
[2025-11-23 16:03:09] total 1309136
[2025-11-23 16:03:09] -rw-r--r-- 2 boincer umatlas 407701659 Nov 23 03:45 ATLAS.root_0
[2025-11-23 16:03:09] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 03:45 input.tar.gz
[2025-11-23 16:03:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 03:45 start_atlas.sh
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas 924167997 Nov 23 16:01 HITS.pool.root.1
[2025-11-23 16:03:09] -rw------- 1 boincer umatlas   8069120 Nov 23 16:03 result.tar.gz
16:03:10 (5592): run_atlas exited; CPU time 340325.879872
16:03:10 (5592): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN