Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:28:51 (2493683): wrapper (7.7.26015): starting
08:28:51 (2493683): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 08:28:51] Arguments: --nthreads 3
[2025-11-23 08:28:51] Threads: 3
[2025-11-23 08:28:51] Checking for CVMFS
[2025-11-23 08:28:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:28:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:28:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:28:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:28:52] 2.9.2.0 2430758 13 51108 153201 2 88 34810390 36864001 0 130560 0 187865 100.000 2 40 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 08:28:52] CVMFS is ok
[2025-11-23 08:28:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:28:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:28:52] Further information can be found at the LHC@home message board.
[2025-11-23 08:28:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:28:52] Checking for apptainer binary...
[2025-11-23 08:28:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:28:52] Running /usr/bin/apptainer --version
[2025-11-23 08:28:52] apptainer version 1.4.1-1.1
[2025-11-23 08:28:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:28:52] thA335
[2025-11-23 08:28:52] apptainer works
[2025-11-23 08:28:52] Set ATHENA_PROC_NUMBER=3
[2025-11-23 08:28:52] Set ATHENA_CORE_NUMBER=3
[2025-11-23 08:28:52] Starting ATLAS job with PandaID=6895338369
[2025-11-23 08:28:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 08:33:07]  *** The last 200 lines of the pilot log: ***
[2025-11-23 08:33:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 08:33:07] ANSI_COLOR="0;31"
[2025-11-23 08:33:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 08:33:07] HOME_URL="https://www.centos.org/"
[2025-11-23 08:33:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 08:33:07] 
[2025-11-23 08:33:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 08:33:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 08:33:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 08:33:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 08:33:07] 
[2025-11-23 08:33:07] 2025-11-23 07:32:15,057 | INFO     | ***************************************
[2025-11-23 08:33:07] 2025-11-23 07:32:15,561 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 08:33:07] 2025-11-23 07:32:15,574 | INFO     | sufficient remaining disk space (826815807488 B)
[2025-11-23 08:33:07] 2025-11-23 07:32:15,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 08:33:07] 2025-11-23 07:32:15,575 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 08:33:07] 2025-11-23 07:32:15,575 | INFO     | update_server=False
[2025-11-23 08:33:07] 2025-11-23 07:32:15,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 08:33:07] 2025-11-23 07:32:15,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:33:07] 2025-11-23 07:32:15,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 08:33:07] 2025-11-23 07:32:16,050 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 08:33:07] 2025-11-23 07:32:16,051 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 08:33:07] 2025-11-23 07:32:16,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 08:33:07] 2025-11-23 07:32:16,051 | INFO     | will abort loop
[2025-11-23 08:33:07] 2025-11-23 07:32:16,279 | INFO     | all data control threads have been joined
[2025-11-23 08:33:07] 2025-11-23 07:32:16,578 | INFO     | [job] queue monitor thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:16,580 | INFO     | [job] retrieve thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:16,615 | INFO     | all payload control threads have been joined
[2025-11-23 08:33:07] 2025-11-23 07:32:16,810 | INFO     | [data] copytool_in thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:16,931 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,057 | INFO     | [job] job monitor thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,181 | INFO     | all job control threads have been joined
[2025-11-23 08:33:07] 2025-11-23 07:32:17,207 | INFO     | [payload] validate_post thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,285 | INFO     | [data] control thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,385 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,577 | INFO     | [job] validate thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,621 | INFO     | [payload] control thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,668 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,734 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,850 | INFO     | [payload] failed_post thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:17,968 | INFO     | [data] copytool_out thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:18,187 | INFO     | [job] control thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:18,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 08:33:07] 2025-11-23 07:32:22,265 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 08:33:07] 2025-11-23 07:32:45,664 | INFO     | PID=2497403 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 08:33:07] 2025-11-23 07:32:45,664 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 08:33:07] 2025-11-23 07:32:45,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 08:33:07] 2025-11-23 07:32:45,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 08:33:07] 2025-11-23 07:33:00,782 | INFO     | [monitor] cgroup control has ended
[2025-11-23 08:33:07] 2025-11-23 07:33:02,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183065995072)>', '<ExcThread(monitor, started 140182187648768)>']
[2025-11-23 08:33:07] 2025-11-23 07:33:02,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 08:33:07] 2025-11-23 07:33:02,756 | INFO     | [monitor] control thread has ended
[2025-11-23 08:33:07] 2025-11-23 07:33:07,152 | INFO     | all workflow threads have been joined
[2025-11-23 08:33:07] 2025-11-23 07:33:07,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 08:33:07] 2025-11-23 07:33:07,153 | INFO     | traces error code: 0
[2025-11-23 08:33:07] 2025-11-23 07:33:07,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 08:33:07] 2025-11-23 07:33:07,198 [wrapper] ==== pilot stdout END ====
[2025-11-23 08:33:07] 2025-11-23 07:33:07,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 08:33:07] 2025-11-23 07:33:07,204 [wrapper] pilotpid: 2497403
[2025-11-23 08:33:07] 2025-11-23 07:33:07,207 [wrapper] Pilot exit status: 0
[2025-11-23 08:33:07] 2025-11-23 07:33:07,214 [wrapper] pandaids: 6895338369
[2025-11-23 08:33:07] 2025-11-23 07:33:07,231 [wrapper] cleanup supervisor_pilot 2497409 2497404
[2025-11-23 08:33:07] 2025-11-23 07:33:07,234 [wrapper] Test setup, not cleaning
[2025-11-23 08:33:07] 2025-11-23 07:33:07,237 [wrapper] apfmon messages muted
[2025-11-23 08:33:07] 2025-11-23 07:33:07,239 [wrapper] ==== wrapper stdout END ====
[2025-11-23 08:33:07] 2025-11-23 07:33:07,242 [wrapper] ==== wrapper stderr END ====
[2025-11-23 08:33:07]  *** Error codes and diagnostics ***
[2025-11-23 08:33:07]     "exeErrorCode": 65,
[2025-11-23 08:33:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 08:33:07]     "pilotErrorCode": 1305,
[2025-11-23 08:33:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-23 08:33:07]  *** Listing of results directory ***
[2025-11-23 08:33:07] total 405048
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc      5112 Nov 22 09:42 queuedata.json
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc    576529 Nov 22 09:43 pilot3.tar.gz
[2025-11-23 08:33:07] -rwx------ 1 boinc boinc     36292 Nov 22 09:44 runpilot2-wrapper.sh
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc       100 Nov 23 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 08:33:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 08:28 run_atlas
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc       105 Nov 23 08:28 job.xml
[2025-11-23 08:33:07] -rw-r--r-- 2 boinc boinc 410572129 Nov 23 08:28 EVNT.47483658._000321.pool.root.1
[2025-11-23 08:33:07] -rw-r--r-- 2 boinc boinc    590100 Nov 23 08:28 input.tar.gz
[2025-11-23 08:33:07] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:28 start_atlas.sh
[2025-11-23 08:33:07] drwxrwx--x 2 boinc boinc      4096 Nov 23 08:28 shared
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:28 boinc_setup_complete
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc      6194 Nov 23 08:28 init_data.xml
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc         0 Nov 23 08:28 boinc_lockfile
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc      2785 Nov 23 08:28 pandaJob.out
[2025-11-23 08:33:07] -rw------- 1 boinc boinc    989784 Nov 23 08:28 agis_schedconf.cvmfs.json
[2025-11-23 08:33:07] -rw------- 1 boinc boinc   1526164 Nov 23 08:29 agis_ddmendpoints.agis.ALL.json
[2025-11-23 08:33:07] drwx------ 5 boinc boinc      4096 Nov 23 08:29 pilot3
[2025-11-23 08:33:07] -rw------- 1 boinc boinc       959 Nov 23 08:30 memory_monitor_summary.json
[2025-11-23 08:33:07] -rw------- 1 boinc boinc     55823 Nov 23 08:30 log.47556137._003174.job.log.tgz.1
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc       523 Nov 23 08:30 boinc_task_state.xml
[2025-11-23 08:33:07] -rw------- 1 boinc boinc        95 Nov 23 08:32 pilot_heartbeat.json
[2025-11-23 08:33:07] -rw------- 1 boinc boinc      8399 Nov 23 08:32 heartbeat.json
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc      8192 Nov 23 08:32 boinc_mmap_file
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc        23 Nov 23 08:32 wrapper_checkpoint.txt
[2025-11-23 08:33:07] -rw------- 1 boinc boinc      4938 Nov 23 08:33 pilotlog.txt
[2025-11-23 08:33:07] -rw------- 1 boinc boinc     92396 Nov 23 08:33 log.47556137._003174.job.log.1
[2025-11-23 08:33:07] -rw------- 1 boinc boinc       186 Nov 23 08:33 output.list
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc       620 Nov 23 08:33 runtime_log
[2025-11-23 08:33:07] -rw------- 1 boinc boinc    163840 Nov 23 08:33 result.tar.gz
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc      8744 Nov 23 08:33 runtime_log.err
[2025-11-23 08:33:07] -rw------- 1 boinc boinc       648 Nov 23 08:33 kazLDmEPyg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmO2HKDmmh7aZm.diag
[2025-11-23 08:33:07] -rw-r--r-- 1 boinc boinc      9106 Nov 23 08:33 stderr.txt
[2025-11-23 08:33:07] No HITS result produced
[2025-11-23 08:33:07]  *** Contents of shared directory: ***
[2025-11-23 08:33:07] total 401712
[2025-11-23 08:33:07] -rw-r--r-- 2 boinc boinc 410572129 Nov 23 08:28 ATLAS.root_0
[2025-11-23 08:33:07] -rw-r--r-- 2 boinc boinc    590100 Nov 23 08:28 input.tar.gz
[2025-11-23 08:33:07] -rw-r--r-- 2 boinc boinc     15847 Nov 23 08:28 start_atlas.sh
[2025-11-23 08:33:07] -rw------- 1 boinc boinc    163840 Nov 23 08:33 result.tar.gz
08:33:08 (2493683): run_atlas exited; CPU time 29.936394
08:33:08 (2493683): called boinc_finish(0)

</stderr_txt>
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