Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:50 (26632): wrapper (7.7.26015): starting
08:49:50 (26632): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 08:49:50] Arguments: --nthreads 8
[2025-11-23 08:49:50] Threads: 8
[2025-11-23 08:49:50] Checking for CVMFS
[2025-11-23 08:49:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:49:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:49:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:49:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:49:50] 2.11.2.0 2989 69063 82476 153210 1 82 12110659 20275200 1 130560 0 19538417 99.882 3624828 29200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 08:49:50] CVMFS is ok
[2025-11-23 08:49:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:49:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:49:50] Further information can be found at the LHC@home message board.
[2025-11-23 08:49:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:49:50] Checking for apptainer binary...
[2025-11-23 08:49:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:49:50] Running /usr/bin/apptainer --version
[2025-11-23 08:49:50] apptainer version 1.3.2-1.el7
[2025-11-23 08:49:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:49:52] c-204-24.aglt2.org
[2025-11-23 08:49:52] apptainer works
[2025-11-23 08:49:52] Set ATHENA_PROC_NUMBER=8
[2025-11-23 08:49:52] Set ATHENA_CORE_NUMBER=8
[2025-11-23 08:49:52] Starting ATLAS job with PandaID=6895331061
[2025-11-23 08:49:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:29:39]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:29:39] 2025-11-24 02:29:04,989 | INFO     | PID=30941 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 21:29:39] 2025-11-24 02:29:05,286 | INFO     | monitor loop #3351: job 0:6895331061 is in state 'finished'
[2025-11-23 21:29:39] 2025-11-24 02:29:05,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,687 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 21:29:39] 2025-11-24 02:29:05,694 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1662.5
[2025-11-23 21:29:39] 2025-11-24 02:29:05,697 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895331061/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,698 | INFO     | extracted standard info from prmon json
[2025-11-23 21:29:39] 2025-11-24 02:29:05,699 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:29:39] 2025-11-24 02:29:05,699 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:29:39] 2025-11-24 02:29:05,712 | INFO     | fitting pss+swap vs Time
[2025-11-23 21:29:39] 2025-11-24 02:29:05,713 | INFO     | sum of square deviations: 128735427727.14207
[2025-11-23 21:29:39] 2025-11-24 02:29:05,725 | INFO     | sum of deviations: 863604696599.4216
[2025-11-23 21:29:39] 2025-11-24 02:29:05,725 | INFO     | mean x: 1763928566.1206434
[2025-11-23 21:29:39] 2025-11-24 02:29:05,725 | INFO     | mean y: 2868333.7064343165
[2025-11-23 21:29:39] 2025-11-24 02:29:05,725 | INFO     | intersect: -11830214610.612682
[2025-11-23 21:29:39] 2025-11-24 02:29:05,726 | INFO     | chi2: 5.312549575804081
[2025-11-23 21:29:39] 2025-11-24 02:29:05,727 | INFO     | sum of square deviations: 126164385847.70322
[2025-11-23 21:29:39] 2025-11-24 02:29:05,738 | INFO     | sum of deviations: 1080720620835.3534
[2025-11-23 21:29:39] 2025-11-24 02:29:05,738 | INFO     | mean x: 1763928413.6248312
[2025-11-23 21:29:39] 2025-11-24 02:29:05,739 | INFO     | mean y: 2881204.8394062077
[2025-11-23 21:29:39] 2025-11-24 02:29:05,739 | INFO     | intersect: -15106880535.55313
[2025-11-23 21:29:39] 2025-11-24 02:29:05,739 | INFO     | chi2: 2.7976892404948335
[2025-11-23 21:29:39] 2025-11-24 02:29:05,740 | INFO     | current chi2=2.7976892404948335 (change=47.33810573294482 %)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,740 | INFO     | sum of square deviations: 123627809730.73764
[2025-11-23 21:29:39] 2025-11-24 02:29:05,752 | INFO     | sum of deviations: 1146934338308.4863
[2025-11-23 21:29:39] 2025-11-24 02:29:05,752 | INFO     | mean x: 1763928261.129076
[2025-11-23 21:29:39] 2025-11-24 02:29:05,752 | INFO     | mean y: 2885178.9633152173
[2025-11-23 21:29:39] 2025-11-24 02:29:05,752 | INFO     | intersect: -16361635857.266844
[2025-11-23 21:29:39] 2025-11-24 02:29:05,753 | INFO     | chi2: 2.444875561566576
[2025-11-23 21:29:39] 2025-11-24 02:29:05,753 | INFO     | current chi2=2.444875561566576 (change=12.610895943033848 %)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,753 | INFO     | right removable region: 735
[2025-11-23 21:29:39] 2025-11-24 02:29:05,754 | INFO     | sum of square deviations: 126164103417.7032
[2025-11-23 21:29:39] 2025-11-24 02:29:05,765 | INFO     | sum of deviations: 660973023013.2113
[2025-11-23 21:29:39] 2025-11-24 02:29:05,766 | INFO     | mean x: 1763928718.6248312
[2025-11-23 21:29:39] 2025-11-24 02:29:05,766 | INFO     | mean y: 2880330.6842105263
[2025-11-23 21:29:39] 2025-11-24 02:29:05,766 | INFO     | intersect: -9238332232.521591
[2025-11-23 21:29:39] 2025-11-24 02:29:05,767 | INFO     | chi2: 3.037579123492517
[2025-11-23 21:29:39] 2025-11-24 02:29:05,767 | INFO     | current chi2=3.037579123492517 (change=42.82257360331994 %)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,768 | INFO     | sum of square deviations: 123627335151.24875
[2025-11-23 21:29:39] 2025-11-24 02:29:05,780 | INFO     | sum of deviations: 619150610160.8069
[2025-11-23 21:29:39] 2025-11-24 02:29:05,781 | INFO     | mean x: 1763928871.1263587
[2025-11-23 21:29:39] 2025-11-24 02:29:05,781 | INFO     | mean y: 2882843.4429347827
[2025-11-23 21:29:39] 2025-11-24 02:29:05,781 | INFO     | intersect: -8831228443.530937
[2025-11-23 21:29:39] 2025-11-24 02:29:05,782 | INFO     | chi2: 2.9999610632031266
[2025-11-23 21:29:39] 2025-11-24 02:29:05,782 | INFO     | current chi2=2.9999610632031266 (change=1.2384224002085715 %)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,782 | INFO     | left removable region: 20
[2025-11-23 21:29:39] 2025-11-24 02:29:05,783 | INFO     | sum of square deviations: 113344401236.62364
[2025-11-23 21:29:39] 2025-11-24 02:29:05,794 | INFO     | sum of deviations: 849331740842.7275
[2025-11-23 21:29:39] 2025-11-24 02:29:05,794 | INFO     | mean x: 1763928840.6405594
[2025-11-23 21:29:39] 2025-11-24 02:29:05,794 | INFO     | mean y: 2903124.1818181816
[2025-11-23 21:29:39] 2025-11-24 02:29:05,794 | INFO     | intersect: -13214871521.927984
[2025-11-23 21:29:39] 2025-11-24 02:29:05,795 | INFO     | chi2: 0.10860443802903065
[2025-11-23 21:29:39] 2025-11-24 02:29:05,795 | INFO     | current memory leak: 7.49 B/s (using 715 data points, chi2=0.11)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,796 | INFO     | could have reported an average CPU frequency of 2150 MHz (28 samples)
[2025-11-23 21:29:39] 2025-11-24 02:29:05,796 | INFO     | ..............................
[2025-11-23 21:29:39] 2025-11-24 02:29:05,796 | INFO     | . Timing measurements:
[2025-11-23 21:29:39] 2025-11-24 02:29:05,796 | INFO     | . get job = 0 s
[2025-11-23 21:29:39] 2025-11-24 02:29:05,796 | INFO     | . initial setup = 3 s
[2025-11-23 21:29:39] 2025-11-24 02:29:05,796 | INFO     | . payload setup = 8 s
[2025-11-23 21:29:39] 2025-11-24 02:29:05,797 | INFO     | . stage-in = 0 s
[2025-11-23 21:29:39] 2025-11-24 02:29:05,797 | INFO     | . payload execution = 45492 s
[2025-11-23 21:29:39] 2025-11-24 02:29:05,797 | INFO     | . stage-out = 3 s
[2025-11-23 21:29:39] 2025-11-24 02:29:05,797 | INFO     | . log creation = 0 s
[2025-11-23 21:29:39] 2025-11-24 02:29:05,797 | INFO     | ..............................
[2025-11-23 21:29:39] 2025-11-24 02:29:05,990 | INFO     | time since job start (45535s) is within the limit (172800.0s)
[2025-11-23 21:29:39] 2025-11-24 02:29:06,298 | INFO     | 
[2025-11-23 21:29:39] 2025-11-24 02:29:06,298 | INFO     | job summary report
[2025-11-23 21:29:39] 2025-11-24 02:29:06,298 | INFO     | --------------------------------------------------
[2025-11-23 21:29:39] 2025-11-24 02:29:06,298 | INFO     | PanDA job id: 6895331061
[2025-11-23 21:29:39] 2025-11-24 02:29:06,299 | INFO     | task id: 47556137
[2025-11-23 21:29:39] 2025-11-24 02:29:06,299 | INFO     | errors: (none)
[2025-11-23 21:29:39] 2025-11-24 02:29:06,299 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 21:29:39] 2025-11-24 02:29:06,299 | INFO     | pilot state: finished 
[2025-11-23 21:29:39] 2025-11-24 02:29:06,299 | INFO     | transexitcode: 0
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | exeerrorcode: 0
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | exeerrordiag: 
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | exitcode: 0
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | exitmsg: OK
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | cpuconsumptiontime: 351221 s
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | nevents: 1000
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | neventsw: 0
[2025-11-23 21:29:39] 2025-11-24 02:29:06,300 | INFO     | pid: 5625
[2025-11-23 21:29:39] 2025-11-24 02:29:06,301 | INFO     | pgrp: 5625
[2025-11-23 21:29:39] 2025-11-24 02:29:06,301 | INFO     | corecount: 8
[2025-11-23 21:29:39] 2025-11-24 02:29:06,301 | INFO     | event service: False
[2025-11-23 21:29:39] 2025-11-24 02:29:06,301 | INFO     | sizes: {0: 2298636, 1: 2298835, 7: 2299097, 12: 2299125, 45505: 2345247, 45506: 2345246, 45510: 2354480, 45518: 2354670}
[2025-11-23 21:29:39] 2025-11-24 02:29:06,301 | INFO     | --------------------------------------------------
[2025-11-23 21:29:39] 2025-11-24 02:29:06,301 | INFO     | 
[2025-11-23 21:29:39] 2025-11-24 02:29:06,301 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 21:29:39] 2025-11-24 02:29:06,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 21:29:39] 2025-11-24 02:29:06,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 21:29:39] 2025-11-24 02:29:06,334 | INFO     | job 6895331061 has completed (purged errors)
[2025-11-23 21:29:39] 2025-11-24 02:29:06,334 | INFO     | overall cleanup function is called
[2025-11-23 21:29:39] 2025-11-24 02:29:07,351 | INFO     | --- collectZombieJob: --- 10, [5625]
[2025-11-23 21:29:39] 2025-11-24 02:29:07,351 | INFO     | zombie collector waiting for pid 5625
[2025-11-23 21:29:39] 2025-11-24 02:29:07,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 21:29:39] 2025-11-24 02:29:07,360 | INFO     | collected zombie processes
[2025-11-23 21:29:39] 2025-11-24 02:29:07,360 | INFO     | will attempt to kill all subprocesses of pid=5625
[2025-11-23 21:29:39] 2025-11-24 02:29:07,451 | INFO     | process IDs to be killed: [5625] (in reverse order)
[2025-11-23 21:29:39] 2025-11-24 02:29:07,514 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 21:29:39] 2025-11-24 02:29:07,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 21:29:39] 2025-11-24 02:29:07,520 | INFO     | did not find any defunct processes belonging to 5625
[2025-11-23 21:29:39] 2025-11-24 02:29:07,523 | INFO     | did not find any defunct processes belonging to 5625
[2025-11-23 21:29:39] 2025-11-24 02:29:07,526 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 21:29:39] 2025-11-24 02:29:07,526 | INFO     | ready for new job
[2025-11-23 21:29:39] 2025-11-24 02:29:07,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 21:29:39] 2025-11-24 02:29:07,531 | INFO     | ***************************************
[2025-11-23 21:29:39] 2025-11-24 02:29:07,531 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 21:29:39] 2025-11-24 02:29:07,531 | INFO     | ***************************************
[2025-11-23 21:29:39] 2025-11-24 02:29:07,531 | INFO     | 
[2025-11-23 21:29:39] 2025-11-24 02:29:07,531 | INFO     | architecture information:
[2025-11-23 21:29:39] 2025-11-24 02:29:07,532 | INFO     | executing command: cat /etc/os-release
[2025-11-23 21:29:39] 2025-11-24 02:29:07,552 | INFO     | cat /etc/os-release:
[2025-11-23 21:29:39] NAME="CentOS Linux"
[2025-11-23 21:29:39] VERSION="7 (Core)"
[2025-11-23 21:29:39] ID="centos"
[2025-11-23 21:29:39] ID_LIKE="rhel fedora"
[2025-11-23 21:29:39] VERSION_ID="7"
[2025-11-23 21:29:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:29:39] ANSI_COLOR="0;31"
[2025-11-23 21:29:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:29:39] HOME_URL="https://www.centos.org/"
[2025-11-23 21:29:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:29:39] 
[2025-11-23 21:29:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:29:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:29:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:29:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:29:39] 
[2025-11-23 21:29:39] 2025-11-24 02:29:07,552 | INFO     | ***************************************
[2025-11-23 21:29:39] 2025-11-24 02:29:08,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 21:29:39] 2025-11-24 02:29:08,081 | INFO     | sufficient remaining disk space (17604542464 B)
[2025-11-23 21:29:39] 2025-11-24 02:29:08,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:29:39] 2025-11-24 02:29:08,082 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:29:39] 2025-11-24 02:29:08,082 | INFO     | update_server=False
[2025-11-23 21:29:39] 2025-11-24 02:29:08,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:29:39] 2025-11-24 02:29:08,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:29:39] 2025-11-24 02:29:08,348 | INFO     | all data control threads have been joined
[2025-11-23 21:29:39] 2025-11-24 02:29:08,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:29:39] 2025-11-24 02:29:08,642 | INFO     | all payload control threads have been joined
[2025-11-23 21:29:39] 2025-11-24 02:29:08,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:29:39] 2025-11-24 02:29:08,794 | INFO     | aborting loop
[2025-11-23 21:29:39] 2025-11-24 02:29:08,868 | INFO     | all job control threads have been joined
[2025-11-23 21:29:39] 2025-11-24 02:29:09,086 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,288 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,353 | INFO     | [data] control thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,392 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,406 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,647 | INFO     | [payload] control thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,701 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,792 | INFO     | [job] validate thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,800 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:09,874 | INFO     | [job] control thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:10,013 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:10,270 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:10,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:10,504 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:10,905 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:29:39] 2025-11-24 02:29:11,910 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:12,357 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:29:39] 2025-11-24 02:29:25,830 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:29:39] 2025-11-24 02:29:27,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180655159104)>', '<ExcThread(monitor, started 140180428154624)>']
[2025-11-23 21:29:39] 2025-11-24 02:29:32,356 | INFO     | all workflow threads have been joined
[2025-11-23 21:29:39] 2025-11-24 02:29:32,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:29:39] 2025-11-24 02:29:32,356 | INFO     | traces error code: 0
[2025-11-23 21:29:39] 2025-11-24 02:29:32,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:29:39] 2025-11-24 02:29:39,205 | INFO     | PID=30941 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 21:29:39] 2025-11-24 02:29:39,206 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:29:39] 2025-11-24 02:29:39,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:29:39] 2025-11-24 02:29:39,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:29:39] 2025-11-24 02:29:39,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:29:39] 2025-11-24 02:29:39,206 | INFO     | [monitor] control thread has ended
[2025-11-23 21:29:39] 2025-11-24 02:29:39,318 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:29:39] 2025-11-24 02:29:39,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:29:39] 2025-11-24 02:29:39,328 [wrapper] pilotpid: 30941
[2025-11-23 21:29:39] 2025-11-24 02:29:39,332 [wrapper] Pilot exit status: 0
[2025-11-23 21:29:39] 2025-11-24 02:29:39,351 [wrapper] pandaids: 6895331061
[2025-11-23 21:29:39] 2025-11-24 02:29:39,398 [wrapper] cleanup supervisor_pilot 14922 30942
[2025-11-23 21:29:39] 2025-11-24 02:29:39,403 [wrapper] Test setup, not cleaning
[2025-11-23 21:29:39] 2025-11-24 02:29:39,408 [wrapper] apfmon messages muted
[2025-11-23 21:29:39] 2025-11-24 02:29:39,413 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:29:39] 2025-11-24 02:29:39,417 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:29:39]  *** Error codes and diagnostics ***
[2025-11-23 21:29:39]     "exeErrorCode": 0,
[2025-11-23 21:29:39]     "exeErrorDiag": "",
[2025-11-23 21:29:39]     "pilotErrorCode": 0,
[2025-11-23 21:29:39]     "pilotErrorDiag": "",
[2025-11-23 21:29:39]  *** Listing of results directory ***
[2025-11-23 21:29:39] total 1310476
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 17:05 pilot3.tar.gz
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 17:22 queuedata.json
[2025-11-23 21:29:39] -rwx------ 1 boincer umatlas     36292 Nov 21 17:22 runpilot2-wrapper.sh
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas       100 Nov 23 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:29:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 08:49 run_atlas
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas       105 Nov 23 08:49 job.xml
[2025-11-23 21:29:39] -rw-r--r-- 2 boincer umatlas 407270552 Nov 23 08:49 EVNT.47483658._000157.pool.root.1
[2025-11-23 21:29:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:49 start_atlas.sh
[2025-11-23 21:29:39] drwxrwx--x 2 boincer umatlas      4096 Nov 23 08:49 shared
[2025-11-23 21:29:39] -rw-r--r-- 2 boincer umatlas    590103 Nov 23 08:49 input.tar.gz
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas         0 Nov 23 08:49 boinc_lockfile
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 08:49 pandaJob.out
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas        57 Nov 23 08:49 setup.sh.local
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas    989785 Nov 23 08:50 agis_schedconf.cvmfs.json
[2025-11-23 21:29:39] drwx------ 5 boincer umatlas      4096 Nov 23 08:50 pilot3
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas       532 Nov 23 21:18 boinc_task_state.xml
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas 914236256 Nov 23 21:28 HITS.47556137._001565.pool.root.1
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas      1064 Nov 23 21:28 memory_monitor_summary.json
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas   1526164 Nov 23 21:28 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas   1987480 Nov 23 21:28 log.47556137._001565.job.log.tgz.1
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas      8659 Nov 23 21:29 heartbeat.json
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 21:29 init_data.xml
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 21:29 boinc_mmap_file
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas        29 Nov 23 21:29 wrapper_checkpoint.txt
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas       745 Nov 23 21:29 pilotlog.txt
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas        95 Nov 23 21:29 pilot_heartbeat.json
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas   6259215 Nov 23 21:29 log.47556137._001565.job.log.1
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas       353 Nov 23 21:29 output.list
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas       620 Nov 23 21:29 runtime_log
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas   8263680 Nov 23 21:29 result.tar.gz
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 21:29 runtime_log.err
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas       668 Nov 23 21:29 oSQMDmkhog8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIqHKDmeh4NVo.diag
[2025-11-23 21:29:39] -rw-r--r-- 1 boincer umatlas     21413 Nov 23 21:29 stderr.txt
[2025-11-23 21:29:39] HITS file was successfully produced:
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas 914236256 Nov 23 21:28 shared/HITS.pool.root.1
[2025-11-23 21:29:39]  *** Contents of shared directory: ***
[2025-11-23 21:29:39] total 1299216
[2025-11-23 21:29:39] -rw-r--r-- 2 boincer umatlas 407270552 Nov 23 08:49 ATLAS.root_0
[2025-11-23 21:29:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 08:49 start_atlas.sh
[2025-11-23 21:29:39] -rw-r--r-- 2 boincer umatlas    590103 Nov 23 08:49 input.tar.gz
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas 914236256 Nov 23 21:28 HITS.pool.root.1
[2025-11-23 21:29:39] -rw------- 1 boincer umatlas   8263680 Nov 23 21:29 result.tar.gz
21:29:41 (26632): run_atlas exited; CPU time 347234.833454
21:29:41 (26632): called boinc_finish(0)

</stderr_txt>
]]>

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