Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:53:54 (12488): wrapper (7.7.26015): starting
01:53:54 (12488): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:53:54] Arguments: --nthreads 8
[2025-11-23 01:53:54] Threads: 8
[2025-11-23 01:53:54] Checking for CVMFS
[2025-11-23 01:53:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:53:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:53:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:53:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:53:55] 2.11.2.0 27562 329413 279944 153199 0 81 9681115 18432000 2827 130560 7 670988070 99.307 1126964473 26040 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-23 01:53:55] CVMFS is ok
[2025-11-23 01:53:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 01:53:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 01:53:55] Further information can be found at the LHC@home message board.
[2025-11-23 01:53:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:53:55] Checking for apptainer binary...
[2025-11-23 01:53:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:53:55] Running /usr/bin/apptainer --version
[2025-11-23 01:53:55] apptainer version 1.3.2-1.el7
[2025-11-23 01:53:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:53:55] c-9-30.aglt2.org
[2025-11-23 01:53:55] apptainer works
[2025-11-23 01:53:55] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:53:55] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:53:55] Starting ATLAS job with PandaID=6895337566
[2025-11-23 01:53:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:05:20]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:05:20] 2025-11-24 00:04:45,354 | INFO     | monitor loop #4270: job 0:6895337566 is in state 'finished'
[2025-11-23 19:05:20] 2025-11-24 00:04:45,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:05:20] 2025-11-24 00:04:46,677 | INFO     | time since job start (61839s) is within the limit (172800.0s)
[2025-11-23 19:05:20] 2025-11-24 00:04:46,936 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 19:05:20] 2025-11-24 00:04:46,940 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.921812500001
[2025-11-23 19:05:20] 2025-11-24 00:04:46,944 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895337566/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:05:20] 2025-11-24 00:04:46,944 | INFO     | extracted standard info from prmon json
[2025-11-23 19:05:20] 2025-11-24 00:04:46,944 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:05:20] 2025-11-24 00:04:46,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:05:20] 2025-11-24 00:04:46,956 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:05:20] 2025-11-24 00:04:46,957 | INFO     | sum of square deviations: 323291870378.0679
[2025-11-23 19:05:20] 2025-11-24 00:04:46,973 | INFO     | sum of deviations: 1666077523172.6328
[2025-11-23 19:05:20] 2025-11-24 00:04:46,973 | INFO     | mean x: 1763911771.1568048
[2025-11-23 19:05:20] 2025-11-24 00:04:46,973 | INFO     | mean y: 2867067.046351085
[2025-11-23 19:05:20] 2025-11-24 00:04:46,973 | INFO     | intersect: -9087413339.161322
[2025-11-23 19:05:20] 2025-11-24 00:04:46,974 | INFO     | chi2: 5.186847198793933
[2025-11-23 19:05:20] 2025-11-24 00:04:46,975 | INFO     | sum of square deviations: 318533221488.4005
[2025-11-23 19:05:20] 2025-11-24 00:04:46,990 | INFO     | sum of deviations: 1966736082593.9636
[2025-11-23 19:05:20] 2025-11-24 00:04:46,990 | INFO     | mean x: 1763911618.6600595
[2025-11-23 19:05:20] 2025-11-24 00:04:46,990 | INFO     | mean y: 2876695.2943508425
[2025-11-23 19:05:20] 2025-11-24 00:04:46,990 | INFO     | intersect: -10888133701.408628
[2025-11-23 19:05:20] 2025-11-24 00:04:46,991 | INFO     | chi2: 2.545368714145827
[2025-11-23 19:05:20] 2025-11-24 00:04:46,991 | INFO     | current chi2=2.545368714145827 (change=50.92647582258281 %)
[2025-11-23 19:05:20] 2025-11-24 00:04:46,992 | INFO     | sum of square deviations: 313821503711.21136
[2025-11-23 19:05:20] 2025-11-24 00:04:47,008 | INFO     | sum of deviations: 2084727096116.7366
[2025-11-23 19:05:20] 2025-11-24 00:04:47,008 | INFO     | mean x: 1763911466.1633465
[2025-11-23 19:05:20] 2025-11-24 00:04:47,008 | INFO     | mean y: 2880512.721115538
[2025-11-23 19:05:20] 2025-11-24 00:04:47,008 | INFO     | intersect: -11714844325.044224
[2025-11-23 19:05:20] 2025-11-24 00:04:47,009 | INFO     | chi2: 2.0466722376269395
[2025-11-23 19:05:20] 2025-11-24 00:04:47,009 | INFO     | current chi2=2.0466722376269395 (change=19.592307933518384 %)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,009 | INFO     | right removable region: 1003
[2025-11-23 19:05:20] 2025-11-24 00:04:47,010 | INFO     | sum of square deviations: 318532938571.0348
[2025-11-23 19:05:20] 2025-11-24 00:04:47,025 | INFO     | sum of deviations: 1436186977408.8047
[2025-11-23 19:05:20] 2025-11-24 00:04:47,025 | INFO     | mean x: 1763911923.6580772
[2025-11-23 19:05:20] 2025-11-24 00:04:47,025 | INFO     | mean y: 2874421.6313181366
[2025-11-23 19:05:20] 2025-11-24 00:04:47,026 | INFO     | intersect: -7950172272.435774
[2025-11-23 19:05:20] 2025-11-24 00:04:47,026 | INFO     | chi2: 3.434542184459742
[2025-11-23 19:05:20] 2025-11-24 00:04:47,026 | INFO     | current chi2=3.434542184459742 (change=33.78362514210258 %)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,027 | INFO     | sum of square deviations: 313821061097.13556
[2025-11-23 19:05:20] 2025-11-24 00:04:47,048 | INFO     | sum of deviations: 1376495199060.7158
[2025-11-23 19:05:20] 2025-11-24 00:04:47,048 | INFO     | mean x: 1763912076.1573706
[2025-11-23 19:05:20] 2025-11-24 00:04:47,049 | INFO     | mean y: 2876353.05876494
[2025-11-23 19:05:20] 2025-11-24 00:04:47,049 | INFO     | intersect: -7734069331.55323
[2025-11-23 19:05:20] 2025-11-24 00:04:47,050 | INFO     | chi2: 3.3973889649921687
[2025-11-23 19:05:20] 2025-11-24 00:04:47,050 | INFO     | current chi2=3.3973889649921687 (change=1.0817517291148862 %)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,050 | INFO     | left removable region: 20
[2025-11-23 19:05:20] 2025-11-24 00:04:47,052 | INFO     | sum of square deviations: 294538636018.8871
[2025-11-23 19:05:20] 2025-11-24 00:04:47,080 | INFO     | sum of deviations: 1704133840667.1133
[2025-11-23 19:05:20] 2025-11-24 00:04:47,080 | INFO     | mean x: 1763912045.6653104
[2025-11-23 19:05:20] 2025-11-24 00:04:47,080 | INFO     | mean y: 2893512.085452696
[2025-11-23 19:05:20] 2025-11-24 00:04:47,081 | INFO     | intersect: -10202702091.969208
[2025-11-23 19:05:20] 2025-11-24 00:04:47,082 | INFO     | chi2: 0.1983213858189602
[2025-11-23 19:05:20] 2025-11-24 00:04:47,082 | INFO     | current memory leak: 5.79 B/s (using 983 data points, chi2=0.20)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,083 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,084 | INFO     | ..............................
[2025-11-23 19:05:20] 2025-11-24 00:04:47,084 | INFO     | . Timing measurements:
[2025-11-23 19:05:20] 2025-11-24 00:04:47,084 | INFO     | . get job = 0 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,084 | INFO     | . initial setup = 2 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,084 | INFO     | . payload setup = 5 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,084 | INFO     | . stage-in = 0 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,084 | INFO     | . payload execution = 61800 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,085 | INFO     | . stage-out = 4 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,085 | INFO     | . log creation = 0 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,085 | INFO     | ..............................
[2025-11-23 19:05:20] 2025-11-24 00:04:47,648 | INFO     | 
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | job summary report
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | --------------------------------------------------
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | PanDA job id: 6895337566
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | task id: 47556149
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | errors: (none)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | pilot state: finished 
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | transexitcode: 0
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | exeerrorcode: 0
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | exeerrordiag: 
[2025-11-23 19:05:20] 2025-11-24 00:04:47,649 | INFO     | exitcode: 0
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | exitmsg: OK
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | cpuconsumptiontime: 475168 s
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | nevents: 1000
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | neventsw: 0
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | pid: 22906
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | pgrp: 22906
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | corecount: 8
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | event service: False
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | sizes: {0: 2298577, 1: 2298832, 2: 2298832, 5: 2299122, 12: 2299178, 61809: 2352302, 61814: 2361296, 61817: 2361352, 61824: 2361598}
[2025-11-23 19:05:20] 2025-11-24 00:04:47,650 | INFO     | --------------------------------------------------
[2025-11-23 19:05:20] 2025-11-24 00:04:47,651 | INFO     | 
[2025-11-23 19:05:20] 2025-11-24 00:04:47,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-23 19:05:20] 2025-11-24 00:04:47,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:05:20] 2025-11-24 00:04:47,673 | INFO     | job 6895337566 has completed (purged errors)
[2025-11-23 19:05:20] 2025-11-24 00:04:47,673 | INFO     | overall cleanup function is called
[2025-11-23 19:05:20] 2025-11-24 00:04:48,686 | INFO     | --- collectZombieJob: --- 10, [22906]
[2025-11-23 19:05:20] 2025-11-24 00:04:48,687 | INFO     | zombie collector waiting for pid 22906
[2025-11-23 19:05:20] 2025-11-24 00:04:48,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:05:20] 2025-11-24 00:04:48,687 | INFO     | collected zombie processes
[2025-11-23 19:05:20] 2025-11-24 00:04:48,687 | INFO     | will attempt to kill all subprocesses of pid=22906
[2025-11-23 19:05:20] 2025-11-24 00:04:48,942 | INFO     | process IDs to be killed: [22906] (in reverse order)
[2025-11-23 19:05:20] 2025-11-24 00:04:49,001 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:05:20] 2025-11-24 00:04:49,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:05:20] 2025-11-24 00:04:49,007 | INFO     | did not find any defunct processes belonging to 22906
[2025-11-23 19:05:20] 2025-11-24 00:04:49,011 | INFO     | did not find any defunct processes belonging to 22906
[2025-11-23 19:05:20] 2025-11-24 00:04:49,012 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:05:20] 2025-11-24 00:04:49,013 | INFO     | ready for new job
[2025-11-23 19:05:20] 2025-11-24 00:04:49,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:05:20] 2025-11-24 00:04:49,017 | INFO     | ***************************************
[2025-11-23 19:05:20] 2025-11-24 00:04:49,017 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:05:20] 2025-11-24 00:04:49,017 | INFO     | ***************************************
[2025-11-23 19:05:20] 2025-11-24 00:04:49,017 | INFO     | 
[2025-11-23 19:05:20] 2025-11-24 00:04:49,018 | INFO     | architecture information:
[2025-11-23 19:05:20] 2025-11-24 00:04:49,018 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:05:20] 2025-11-24 00:04:49,030 | INFO     | cat /etc/os-release:
[2025-11-23 19:05:20] NAME="CentOS Linux"
[2025-11-23 19:05:20] VERSION="7 (Core)"
[2025-11-23 19:05:20] ID="centos"
[2025-11-23 19:05:20] ID_LIKE="rhel fedora"
[2025-11-23 19:05:20] VERSION_ID="7"
[2025-11-23 19:05:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:05:20] ANSI_COLOR="0;31"
[2025-11-23 19:05:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:05:20] HOME_URL="https://www.centos.org/"
[2025-11-23 19:05:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:05:20] 
[2025-11-23 19:05:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:05:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:05:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:05:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:05:20] 
[2025-11-23 19:05:20] 2025-11-24 00:04:49,030 | INFO     | ***************************************
[2025-11-23 19:05:20] 2025-11-24 00:04:49,534 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-23 19:05:20] 2025-11-24 00:04:49,553 | INFO     | sufficient remaining disk space (100257497088 B)
[2025-11-23 19:05:20] 2025-11-24 00:04:49,554 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:05:20] 2025-11-24 00:04:49,554 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:05:20] 2025-11-24 00:04:49,554 | INFO     | update_server=False
[2025-11-23 19:05:20] 2025-11-24 00:04:49,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:05:20] 2025-11-24 00:04:49,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:05:20] 2025-11-24 00:04:49,554 | INFO     | aborting loop
[2025-11-23 19:05:20] 2025-11-24 00:04:49,679 | INFO     | all data control threads have been joined
[2025-11-23 19:05:20] 2025-11-24 00:04:50,144 | INFO     | all payload control threads have been joined
[2025-11-23 19:05:20] 2025-11-24 00:04:50,397 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:05:20] 2025-11-24 00:04:50,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:05:20] 2025-11-24 00:04:50,558 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:50,559 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:50,684 | INFO     | [data] control thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:50,816 | INFO     | all job control threads have been joined
[2025-11-23 19:05:20] 2025-11-24 00:04:50,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:05:20] 2025-11-24 00:04:51,035 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,133 | INFO     | [job] validate thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,150 | INFO     | [payload] control thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,183 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,414 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,433 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,532 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,820 | INFO     | [job] control thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,850 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:51,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:52,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:05:20] 2025-11-24 00:04:52,530 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:53,257 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:54,870 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:05:20] 2025-11-24 00:04:55,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985660880704)>', '<ExcThread(monitor, started 139985357350656)>']
[2025-11-23 19:05:20] 2025-11-24 00:05:00,779 | INFO     | all workflow threads have been joined
[2025-11-23 19:05:20] 2025-11-24 00:05:00,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:05:20] 2025-11-24 00:05:00,781 | INFO     | traces error code: 0
[2025-11-23 19:05:20] 2025-11-24 00:05:00,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:05:20] 2025-11-24 00:05:20,229 | INFO     | PID=16417 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 19:05:20] 2025-11-24 00:05:20,230 | INFO     | .. there are 4 such processes running
[2025-11-23 19:05:20] 2025-11-24 00:05:20,230 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:05:20] 2025-11-24 00:05:20,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:05:20] 2025-11-24 00:05:20,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:05:20] 2025-11-24 00:05:20,231 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:05:20] 2025-11-24 00:05:20,231 | INFO     | [monitor] control thread has ended
[2025-11-23 19:05:20] 2025-11-24 00:05:20,353 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:05:20] 2025-11-24 00:05:20,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:05:20] 2025-11-24 00:05:20,359 [wrapper] pilotpid: 16417
[2025-11-23 19:05:20] 2025-11-24 00:05:20,361 [wrapper] Pilot exit status: 0
[2025-11-23 19:05:20] 2025-11-24 00:05:20,377 [wrapper] pandaids: 6895337566
[2025-11-23 19:05:20] 2025-11-24 00:05:20,444 [wrapper] cleanup supervisor_pilot  5372 16419
[2025-11-23 19:05:20] 2025-11-24 00:05:20,447 [wrapper] Test setup, not cleaning
[2025-11-23 19:05:20] 2025-11-24 00:05:20,449 [wrapper] apfmon messages muted
[2025-11-23 19:05:20] 2025-11-24 00:05:20,452 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:05:20] 2025-11-24 00:05:20,454 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:05:20]  *** Error codes and diagnostics ***
[2025-11-23 19:05:20]     "exeErrorCode": 0,
[2025-11-23 19:05:20]     "exeErrorDiag": "",
[2025-11-23 19:05:20]     "pilotErrorCode": 0,
[2025-11-23 19:05:20]     "pilotErrorDiag": "",
[2025-11-23 19:05:20]  *** Listing of results directory ***
[2025-11-23 19:05:20] total 1324608
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 02:52 pilot3.tar.gz
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 03:21 queuedata.json
[2025-11-23 19:05:20] -rwx------ 1 boincer umatlas     36292 Nov 22 03:22 runpilot2-wrapper.sh
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas       100 Nov 23 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:05:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 01:53 run_atlas
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas       105 Nov 23 01:53 job.xml
[2025-11-23 19:05:20] -rw-r--r-- 2 boincer umatlas 410792078 Nov 23 01:53 EVNT.47483658._001076.pool.root.1
[2025-11-23 19:05:20] drwxrwx--x 2 boincer umatlas      4096 Nov 23 01:53 shared
[2025-11-23 19:05:20] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 01:53 input.tar.gz
[2025-11-23 19:05:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:53 start_atlas.sh
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas         0 Nov 23 01:53 boinc_lockfile
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas      2784 Nov 23 01:53 pandaJob.out
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas        57 Nov 23 01:53 setup.sh.local
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas    989784 Nov 23 01:54 agis_schedconf.cvmfs.json
[2025-11-23 19:05:20] drwx------ 5 boincer umatlas      4096 Nov 23 01:54 pilot3
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas       533 Nov 23 18:52 boinc_task_state.xml
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas      6037 Nov 23 19:00 init_data.xml
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas 920397619 Nov 23 19:03 HITS.47556149._000627.pool.root.1
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas      1062 Nov 23 19:04 memory_monitor_summary.json
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas   1526164 Nov 23 19:04 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas   2220880 Nov 23 19:04 log.47556149._000627.job.log.tgz.1
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas      8647 Nov 23 19:04 heartbeat.json
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 19:05 boinc_mmap_file
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas        29 Nov 23 19:05 wrapper_checkpoint.txt
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas        95 Nov 23 19:05 pilot_heartbeat.json
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas       820 Nov 23 19:05 pilotlog.txt
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas   8421165 Nov 23 19:05 log.47556149._000627.job.log.1
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas       353 Nov 23 19:05 output.list
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas       620 Nov 23 19:05 runtime_log
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas  10659840 Nov 23 19:05 result.tar.gz
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas      9333 Nov 23 19:05 runtime_log.err
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas       665 Nov 23 19:05 mq3MDmb4xg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn1HKDmLZvcBo.diag
[2025-11-23 19:05:20] -rw-r--r-- 1 boincer umatlas     21325 Nov 23 19:05 stderr.txt
[2025-11-23 19:05:20] HITS file was successfully produced:
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas 920397619 Nov 23 19:03 shared/HITS.pool.root.1
[2025-11-23 19:05:20]  *** Contents of shared directory: ***
[2025-11-23 19:05:20] total 1311012
[2025-11-23 19:05:20] -rw-r--r-- 2 boincer umatlas 410792078 Nov 23 01:53 ATLAS.root_0
[2025-11-23 19:05:20] -rw-r--r-- 2 boincer umatlas    590105 Nov 23 01:53 input.tar.gz
[2025-11-23 19:05:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:53 start_atlas.sh
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas 920397619 Nov 23 19:03 HITS.pool.root.1
[2025-11-23 19:05:20] -rw------- 1 boincer umatlas  10659840 Nov 23 19:05 result.tar.gz
19:05:22 (12488): run_atlas exited; CPU time 475448.685117
19:05:22 (12488): called boinc_finish(0)

</stderr_txt>
]]>

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