Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:27:56 (32295): wrapper (7.7.26015): starting
01:27:56 (32295): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:27:56] Arguments: --nthreads 8
[2025-11-23 01:27:56] Threads: 8
[2025-11-23 01:27:56] Checking for CVMFS
[2025-11-23 01:27:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:27:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:27:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:27:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:27:56] 2.11.2.0 28705 113162 139332 153199 3 81 9821447 18432001 964 130560 0 82057481 99.974 4849834 31971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 01:27:56] CVMFS is ok
[2025-11-23 01:27:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 01:27:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 01:27:56] Further information can be found at the LHC@home message board.
[2025-11-23 01:27:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:27:56] Checking for apptainer binary...
[2025-11-23 01:27:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:27:56] Running /usr/bin/apptainer --version
[2025-11-23 01:27:56] apptainer version 1.3.2-1.el7
[2025-11-23 01:27:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:27:57] c-206-27.aglt2.org
[2025-11-23 01:27:57] apptainer works
[2025-11-23 01:27:57] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:27:57] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:27:57] Starting ATLAS job with PandaID=6895337522
[2025-11-23 01:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:00:03 (32295): BOINC client no longer exists - exiting
08:00:03 (32295): timer handler: client dead, exiting
08:13:15 (19050): wrapper (7.7.26015): starting
08:13:15 (19050): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 08:13:15] Arguments: --nthreads 8
[2025-11-23 08:13:15] Threads: 8
[2025-11-23 08:13:15] This job has been restarted, cleaning up previous attempt
[2025-11-23 08:13:15] Checking for CVMFS
[2025-11-23 08:13:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 08:13:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 08:13:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 08:13:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 08:13:16] 2.11.2.0 28705 113568 138056 153209 2 56 9868262 18432000 1 130560 0 82443993 99.974 4862983 31980 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 08:13:16] CVMFS is ok
[2025-11-23 08:13:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 08:13:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 08:13:16] Further information can be found at the LHC@home message board.
[2025-11-23 08:13:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 08:13:16] Checking for apptainer binary...
[2025-11-23 08:13:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 08:13:16] Running /usr/bin/apptainer --version
[2025-11-23 08:13:16] apptainer version 1.3.2-1.el7
[2025-11-23 08:13:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 08:13:17] c-206-27.aglt2.org
[2025-11-23 08:13:17] apptainer works
[2025-11-23 08:13:17] Set ATHENA_PROC_NUMBER=8
[2025-11-23 08:13:17] Set ATHENA_CORE_NUMBER=8
[2025-11-23 08:13:17] Starting ATLAS job with PandaID=6895337522
[2025-11-23 08:13:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:45:39]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:45:39] 2025-11-24 08:45:17,853 | INFO     | monitor loop #5025: job 0:6895337522 is in state 'finished'
[2025-11-24 03:45:39] 2025-11-24 08:45:17,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,466 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 03:45:39] 2025-11-24 08:45:19,472 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2128.4583333333335
[2025-11-24 03:45:39] 2025-11-24 08:45:19,475 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895337522/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,476 | INFO     | extracted standard info from prmon json
[2025-11-24 03:45:39] 2025-11-24 08:45:19,476 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:45:39] 2025-11-24 08:45:19,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:45:39] 2025-11-24 08:45:19,491 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:45:39] 2025-11-24 08:45:19,492 | INFO     | sum of square deviations: 474060489694.1796
[2025-11-24 03:45:39] 2025-11-24 08:45:19,515 | INFO     | sum of deviations: 2361854960368.953
[2025-11-24 03:45:39] 2025-11-24 08:45:19,515 | INFO     | mean x: 1763938744.2838542
[2025-11-24 03:45:39] 2025-11-24 08:45:19,515 | INFO     | mean y: 2865249.1102430555
[2025-11-24 03:45:39] 2025-11-24 08:45:19,515 | INFO     | intersect: -8785396087.879543
[2025-11-24 03:45:39] 2025-11-24 08:45:19,516 | INFO     | chi2: 5.048117787326669
[2025-11-24 03:45:39] 2025-11-24 08:45:19,517 | INFO     | sum of square deviations: 467914826616.09436
[2025-11-24 03:45:39] 2025-11-24 08:45:19,541 | INFO     | sum of deviations: 2670251022432.575
[2025-11-24 03:45:39] 2025-11-24 08:45:19,541 | INFO     | mean x: 1763938591.7872713
[2025-11-24 03:45:39] 2025-11-24 08:45:19,541 | INFO     | mean y: 2872897.4777680906
[2025-11-24 03:45:39] 2025-11-24 08:45:19,541 | INFO     | intersect: -10063401048.769157
[2025-11-24 03:45:39] 2025-11-24 08:45:19,542 | INFO     | chi2: 2.8450786803718158
[2025-11-24 03:45:39] 2025-11-24 08:45:19,542 | INFO     | current chi2=2.8450786803718158 (change=43.640802369659376 %)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,543 | INFO     | sum of square deviations: 461822513375.4755
[2025-11-24 03:45:39] 2025-11-24 08:45:19,566 | INFO     | sum of deviations: 2772876701020.8193
[2025-11-24 03:45:39] 2025-11-24 08:45:19,566 | INFO     | mean x: 1763938439.290718
[2025-11-24 03:45:39] 2025-11-24 08:45:19,566 | INFO     | mean y: 2875462.6812609457
[2025-11-24 03:45:39] 2025-11-24 08:45:19,566 | INFO     | intersect: -10588171224.485287
[2025-11-24 03:45:39] 2025-11-24 08:45:19,567 | INFO     | chi2: 2.452346063813289
[2025-11-24 03:45:39] 2025-11-24 08:45:19,567 | INFO     | current chi2=2.452346063813289 (change=13.803928139772987 %)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,567 | INFO     | right removable region: 1141
[2025-11-24 03:45:39] 2025-11-24 08:45:19,568 | INFO     | sum of square deviations: 467914275786.0942
[2025-11-24 03:45:39] 2025-11-24 08:45:19,592 | INFO     | sum of deviations: 2077845188799.884
[2025-11-24 03:45:39] 2025-11-24 08:45:19,592 | INFO     | mean x: 1763938896.7872713
[2025-11-24 03:45:39] 2025-11-24 08:45:19,592 | INFO     | mean y: 2872286.745422842
[2025-11-24 03:45:39] 2025-11-24 08:45:19,592 | INFO     | intersect: -7830169233.240045
[2025-11-24 03:45:39] 2025-11-24 08:45:19,593 | INFO     | chi2: 3.059947883344007
[2025-11-24 03:45:39] 2025-11-24 08:45:19,593 | INFO     | current chi2=3.059947883344007 (change=39.38438023324208 %)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,594 | INFO     | sum of square deviations: 461821691341.7934
[2025-11-24 03:45:39] 2025-11-24 08:45:19,618 | INFO     | sum of deviations: 1980405253611.3083
[2025-11-24 03:45:39] 2025-11-24 08:45:19,618 | INFO     | mean x: 1763939049.2872155
[2025-11-24 03:45:39] 2025-11-24 08:45:19,618 | INFO     | mean y: 2874725.4045534153
[2025-11-24 03:45:39] 2025-11-24 08:45:19,618 | INFO     | intersect: -7561330736.900469
[2025-11-24 03:45:39] 2025-11-24 08:45:19,619 | INFO     | chi2: 2.95516713504378
[2025-11-24 03:45:39] 2025-11-24 08:45:19,619 | INFO     | current chi2=2.95516713504378 (change=3.424265781472046 %)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,619 | INFO     | left removable region: 20
[2025-11-24 03:45:39] 2025-11-24 08:45:19,620 | INFO     | sum of square deviations: 436810827298.5713
[2025-11-24 03:45:39] 2025-11-24 08:45:19,643 | INFO     | sum of deviations: 2246666517159.427
[2025-11-24 03:45:39] 2025-11-24 08:45:19,643 | INFO     | mean x: 1763939018.7921498
[2025-11-24 03:45:39] 2025-11-24 08:45:19,643 | INFO     | mean y: 2888934.3666369314
[2025-11-24 03:45:39] 2025-11-24 08:45:19,643 | INFO     | intersect: -9069648842.08957
[2025-11-24 03:45:39] 2025-11-24 08:45:19,644 | INFO     | chi2: 0.2657033772077891
[2025-11-24 03:45:39] 2025-11-24 08:45:19,644 | INFO     | current memory leak: 5.14 B/s (using 1121 data points, chi2=0.27)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,645 | INFO     | could have reported an average CPU frequency of 2579 MHz (42 samples)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,645 | INFO     | ..............................
[2025-11-24 03:45:39] 2025-11-24 08:45:19,645 | INFO     | . Timing measurements:
[2025-11-24 03:45:39] 2025-11-24 08:45:19,645 | INFO     | . get job = 0 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,645 | INFO     | . initial setup = 2 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,646 | INFO     | . payload setup = 7 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,646 | INFO     | . stage-in = 0 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,646 | INFO     | . payload execution = 70273 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,646 | INFO     | . stage-out = 3 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,646 | INFO     | . log creation = 0 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,646 | INFO     | ..............................
[2025-11-24 03:45:39] 2025-11-24 08:45:19,740 | INFO     | time since job start (70308s) is within the limit (172800.0s)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,858 | INFO     | 
[2025-11-24 03:45:39] 2025-11-24 08:45:19,858 | INFO     | job summary report
[2025-11-24 03:45:39] 2025-11-24 08:45:19,858 | INFO     | --------------------------------------------------
[2025-11-24 03:45:39] 2025-11-24 08:45:19,858 | INFO     | PanDA job id: 6895337522
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | task id: 47556137
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | errors: (none)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | pilot state: finished 
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | transexitcode: 0
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | exeerrorcode: 0
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | exeerrordiag: 
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | exitcode: 0
[2025-11-24 03:45:39] 2025-11-24 08:45:19,859 | INFO     | exitmsg: OK
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | cpuconsumptiontime: 542384 s
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | nevents: 1000
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | neventsw: 0
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | pid: 17112
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | pgrp: 17112
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | corecount: 8
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | event service: False
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | sizes: {0: 2298585, 1: 2298784, 5: 2299046, 11: 2299102, 70284: 2355756, 70287: 2364750, 70289: 2364934, 70293: 2365180}
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | --------------------------------------------------
[2025-11-24 03:45:39] 2025-11-24 08:45:19,860 | INFO     | 
[2025-11-24 03:45:39] 2025-11-24 08:45:19,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 03:45:39] 2025-11-24 08:45:19,873 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,875 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,876 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:45:39] 2025-11-24 08:45:19,876 | INFO     | job 6895337522 has completed (purged errors)
[2025-11-24 03:45:39] 2025-11-24 08:45:19,876 | INFO     | overall cleanup function is called
[2025-11-24 03:45:39] 2025-11-24 08:45:20,886 | INFO     | --- collectZombieJob: --- 10, [17112]
[2025-11-24 03:45:39] 2025-11-24 08:45:20,886 | INFO     | zombie collector waiting for pid 17112
[2025-11-24 03:45:39] 2025-11-24 08:45:20,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:45:39] 2025-11-24 08:45:20,886 | INFO     | collected zombie processes
[2025-11-24 03:45:39] 2025-11-24 08:45:20,887 | INFO     | will attempt to kill all subprocesses of pid=17112
[2025-11-24 03:45:39] 2025-11-24 08:45:20,997 | INFO     | process IDs to be killed: [17112] (in reverse order)
[2025-11-24 03:45:39] 2025-11-24 08:45:21,034 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:45:39] 2025-11-24 08:45:21,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:45:39] 2025-11-24 08:45:21,037 | INFO     | did not find any defunct processes belonging to 17112
[2025-11-24 03:45:39] 2025-11-24 08:45:21,040 | INFO     | did not find any defunct processes belonging to 17112
[2025-11-24 03:45:39] 2025-11-24 08:45:21,041 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:45:39] 2025-11-24 08:45:21,041 | INFO     | ready for new job
[2025-11-24 03:45:39] 2025-11-24 08:45:21,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:45:39] 2025-11-24 08:45:21,045 | INFO     | ***************************************
[2025-11-24 03:45:39] 2025-11-24 08:45:21,045 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:45:39] 2025-11-24 08:45:21,045 | INFO     | ***************************************
[2025-11-24 03:45:39] 2025-11-24 08:45:21,045 | INFO     | 
[2025-11-24 03:45:39] 2025-11-24 08:45:21,046 | INFO     | architecture information:
[2025-11-24 03:45:39] 2025-11-24 08:45:21,047 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:45:39] 2025-11-24 08:45:21,057 | INFO     | cat /etc/os-release:
[2025-11-24 03:45:39] NAME="CentOS Linux"
[2025-11-24 03:45:39] VERSION="7 (Core)"
[2025-11-24 03:45:39] ID="centos"
[2025-11-24 03:45:39] ID_LIKE="rhel fedora"
[2025-11-24 03:45:39] VERSION_ID="7"
[2025-11-24 03:45:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:45:39] ANSI_COLOR="0;31"
[2025-11-24 03:45:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:45:39] HOME_URL="https://www.centos.org/"
[2025-11-24 03:45:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:45:39] 
[2025-11-24 03:45:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:45:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:45:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:45:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:45:39] 
[2025-11-24 03:45:39] 2025-11-24 08:45:21,057 | INFO     | ***************************************
[2025-11-24 03:45:39] 2025-11-24 08:45:21,558 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 03:45:39] 2025-11-24 08:45:21,572 | INFO     | sufficient remaining disk space (25758269440 B)
[2025-11-24 03:45:39] 2025-11-24 08:45:21,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:45:39] 2025-11-24 08:45:21,573 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:45:39] 2025-11-24 08:45:21,573 | INFO     | update_server=False
[2025-11-24 03:45:39] 2025-11-24 08:45:21,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:45:39] 2025-11-24 08:45:21,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:45:39] 2025-11-24 08:45:21,574 | INFO     | aborting loop
[2025-11-24 03:45:39] 2025-11-24 08:45:21,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:45:39] 2025-11-24 08:45:21,574 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 03:45:39] 2025-11-24 08:45:21,575 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:45:39] 2025-11-24 08:45:21,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:45:39] 2025-11-24 08:45:21,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:45:39] 2025-11-24 08:45:21,723 | INFO     | all data control threads have been joined
[2025-11-24 03:45:39] 2025-11-24 08:45:22,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:45:39] 2025-11-24 08:45:22,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:45:39] 2025-11-24 08:45:22,241 | INFO     | all payload control threads have been joined
[2025-11-24 03:45:39] 2025-11-24 08:45:22,335 | INFO     | all job control threads have been joined
[2025-11-24 03:45:39] 2025-11-24 08:45:22,578 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:22,579 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:22,580 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:22,726 | INFO     | [data] control thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:22,850 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,094 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,247 | INFO     | [payload] control thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,338 | INFO     | [job] control thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,367 | INFO     | [job] validate thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,780 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,804 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,870 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:23,891 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:24,144 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:26,099 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:27,321 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:45:39] 2025-11-24 08:45:31,807 | INFO     | job.realtimelogging is not enabled
[2025-11-24 03:45:39] 2025-11-24 08:45:32,812 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:45:39] 2025-11-24 08:45:34,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951628859200)>', '<ExcThread(monitor, started 139951324763904)>']
[2025-11-24 03:45:39] 2025-11-24 08:45:34,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:45:39] 2025-11-24 08:45:34,640 | INFO     | [monitor] control thread has ended
[2025-11-24 03:45:39] 2025-11-24 08:45:39,402 | INFO     | all workflow threads have been joined
[2025-11-24 03:45:39] 2025-11-24 08:45:39,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:45:39] 2025-11-24 08:45:39,403 | INFO     | traces error code: 0
[2025-11-24 03:45:39] 2025-11-24 08:45:39,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:45:39] 2025-11-24 08:45:39,498 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:45:39] 2025-11-24 08:45:39,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:45:39] 2025-11-24 08:45:39,503 [wrapper] pilotpid: 30183
[2025-11-24 03:45:39] 2025-11-24 08:45:39,506 [wrapper] Pilot exit status: 0
[2025-11-24 03:45:39] 2025-11-24 08:45:39,517 [wrapper] pandaids: 6895337522 6895337522
[2025-11-24 03:45:39] 2025-11-24 08:45:39,550 [wrapper] cleanup supervisor_pilot 22959 30184
[2025-11-24 03:45:39] 2025-11-24 08:45:39,553 [wrapper] Test setup, not cleaning
[2025-11-24 03:45:39] 2025-11-24 08:45:39,556 [wrapper] apfmon messages muted
[2025-11-24 03:45:39] 2025-11-24 08:45:39,559 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:45:39] 2025-11-24 08:45:39,562 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:45:39]  *** Error codes and diagnostics ***
[2025-11-24 03:45:39]     "exeErrorCode": 0,
[2025-11-24 03:45:39]     "exeErrorDiag": "",
[2025-11-24 03:45:39]     "pilotErrorCode": 0,
[2025-11-24 03:45:39]     "pilotErrorDiag": "",
[2025-11-24 03:45:39]  *** Listing of results directory ***
[2025-11-24 03:45:39] total 1721372
[2025-11-24 03:45:39] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 02:52 pilot3.tar.gz
[2025-11-24 03:45:39] -rwx------ 1 boincer umatlas     36292 Nov 22 03:12 runpilot2-wrapper.sh
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 03:12 queuedata.json
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas       100 Nov 23 01:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:45:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 01:27 run_atlas
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas       105 Nov 23 01:27 job.xml
[2025-11-24 03:45:39] -rw-r--r-- 3 boincer umatlas 409963176 Nov 23 01:27 EVNT.47483658._000310.pool.root.1
[2025-11-24 03:45:39] -rw-r--r-- 3 boincer umatlas 409963176 Nov 23 01:27 ATLAS.root_0
[2025-11-24 03:45:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:27 start_atlas.sh
[2025-11-24 03:45:39] drwxrwx--x 2 boincer umatlas      4096 Nov 23 01:27 shared
[2025-11-24 03:45:39] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 01:27 input.tar.gz
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas         0 Nov 23 01:27 boinc_lockfile
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 08:13 pandaJob.out
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas        57 Nov 23 08:13 setup.sh.local
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas    989784 Nov 23 08:13 agis_schedconf.cvmfs.json
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas       533 Nov 24 03:32 boinc_task_state.xml
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas      5954 Nov 24 03:38 init_data.xml
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas 914703668 Nov 24 03:44 HITS.47556137._003067.pool.root.1
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas      1064 Nov 24 03:45 memory_monitor_summary.json
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas        96 Nov 24 03:45 pilot_heartbeat.json
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas   1526164 Nov 24 03:45 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas   2313367 Nov 24 03:45 log.47556137._003067.job.log.tgz.1
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas      8658 Nov 24 03:45 heartbeat.json
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 03:45 boinc_mmap_file
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas        29 Nov 24 03:45 wrapper_checkpoint.txt
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas      4624 Nov 24 03:45 pilotlog.txt
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas   9747609 Nov 24 03:45 log.47556137._003067.job.log.1
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas       353 Nov 24 03:45 output.list
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas       620 Nov 24 03:45 runtime_log
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas  12083200 Nov 24 03:45 result.tar.gz
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas      9428 Nov 24 03:45 runtime_log.err
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas       793 Nov 24 03:45 LQvMDmhuxg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZ1HKDm5ONhQo.diag
[2025-11-24 03:45:39] -rw-r--r-- 1 boincer umatlas     23488 Nov 24 03:45 stderr.txt
[2025-11-24 03:45:39] HITS file was successfully produced:
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas 914703668 Nov 24 03:44 shared/HITS.pool.root.1
[2025-11-24 03:45:39]  *** Contents of shared directory: ***
[2025-11-24 03:45:39] total 1306028
[2025-11-24 03:45:39] -rw-r--r-- 3 boincer umatlas 409963176 Nov 23 01:27 ATLAS.root_0
[2025-11-24 03:45:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 01:27 start_atlas.sh
[2025-11-24 03:45:39] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 01:27 input.tar.gz
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas 914703668 Nov 24 03:44 HITS.pool.root.1
[2025-11-24 03:45:39] -rw------- 1 boincer umatlas  12083200 Nov 24 03:45 result.tar.gz
03:45:41 (19050): run_atlas exited; CPU time 541206.136359
03:45:41 (19050): called boinc_finish(0)

</stderr_txt>
]]>

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