Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:02:14 (1161092): wrapper (7.7.26015): starting
00:02:14 (1161092): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:02:14] Arguments: --nthreads 12
[2025-11-24 00:02:14] Threads: 12
[2025-11-24 00:02:14] Checking for CVMFS
[2025-11-24 00:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:15] 2.13.3.0 13543 3336 83944 153223 3 96 3671430 4097025 1044 130560 0 2562921 99.881 423574 18281 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-24 00:02:15] CVMFS is ok
[2025-11-24 00:02:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:15] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:15] Checking for apptainer binary...
[2025-11-24 00:02:15] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-24 00:02:15] apptainer is not installed, using version from CVMFS
[2025-11-24 00:02:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:15] pckelar5.cern.ch
[2025-11-24 00:02:15] apptainer works
[2025-11-24 00:02:15] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:02:15] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:02:15] Starting ATLAS job with PandaID=6895337537
[2025-11-24 00:02:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 11:36:52]  *** The last 200 lines of the pilot log: ***
[2025-11-24 11:36:52] 2025-11-24 10:36:18,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,009 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 11:36:52] 2025-11-24 10:36:19,017 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2817.585833333333
[2025-11-24 11:36:52] 2025-11-24 10:36:19,023 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895337537/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,024 | INFO     | extracted standard info from prmon json
[2025-11-24 11:36:52] 2025-11-24 10:36:19,024 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 11:36:52] 2025-11-24 10:36:19,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 11:36:52] 2025-11-24 10:36:19,044 | INFO     | fitting pss+swap vs Time
[2025-11-24 11:36:52] 2025-11-24 10:36:19,045 | INFO     | sum of square deviations: 98362608693.72464
[2025-11-24 11:36:52] 2025-11-24 10:36:19,061 | INFO     | sum of deviations: 1378020212341.921
[2025-11-24 11:36:52] 2025-11-24 10:36:19,061 | INFO     | mean x: 1763959747.4662757
[2025-11-24 11:36:52] 2025-11-24 10:36:19,061 | INFO     | mean y: 3600751.453079179
[2025-11-24 11:36:52] 2025-11-24 10:36:19,061 | INFO     | intersect: -24708759138.623295
[2025-11-24 11:36:52] 2025-11-24 10:36:19,062 | INFO     | chi2: 5.737852373636561
[2025-11-24 11:36:52] 2025-11-24 10:36:19,064 | INFO     | sum of square deviations: 96215225231.52158
[2025-11-24 11:36:52] 2025-11-24 10:36:19,078 | INFO     | sum of deviations: 1622923824583.625
[2025-11-24 11:36:52] 2025-11-24 10:36:19,079 | INFO     | mean x: 1763959594.973412
[2025-11-24 11:36:52] 2025-11-24 10:36:19,079 | INFO     | mean y: 3618130.257016248
[2025-11-24 11:36:52] 2025-11-24 10:36:19,079 | INFO     | intersect: -29750218078.062164
[2025-11-24 11:36:52] 2025-11-24 10:36:19,080 | INFO     | chi2: 3.2724913321878084
[2025-11-24 11:36:52] 2025-11-24 10:36:19,080 | INFO     | current chi2=3.2724913321878084 (change=42.966616791610576 %)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,082 | INFO     | sum of square deviations: 94099330731.74829
[2025-11-24 11:36:52] 2025-11-24 10:36:19,096 | INFO     | sum of deviations: 1691249966255.2527
[2025-11-24 11:36:52] 2025-11-24 10:36:19,097 | INFO     | mean x: 1763959442.4806547
[2025-11-24 11:36:52] 2025-11-24 10:36:19,097 | INFO     | mean y: 3623043.058035714
[2025-11-24 11:36:52] 2025-11-24 10:36:19,097 | INFO     | intersect: -31700070536.60845
[2025-11-24 11:36:52] 2025-11-24 10:36:19,098 | INFO     | chi2: 2.899705136425501
[2025-11-24 11:36:52] 2025-11-24 10:36:19,098 | INFO     | current chi2=2.899705136425501 (change=11.39151056247666 %)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,098 | INFO     | right removable region: 671
[2025-11-24 11:36:52] 2025-11-24 10:36:19,099 | INFO     | sum of square deviations: 96214864600.46667
[2025-11-24 11:36:52] 2025-11-24 10:36:19,115 | INFO     | sum of deviations: 1131304444686.9348
[2025-11-24 11:36:52] 2025-11-24 10:36:19,115 | INFO     | mean x: 1763959899.971935
[2025-11-24 11:36:52] 2025-11-24 10:36:19,116 | INFO     | mean y: 3618241.5228951257
[2025-11-24 11:36:52] 2025-11-24 10:36:19,116 | INFO     | intersect: -20737206820.949745
[2025-11-24 11:36:52] 2025-11-24 10:36:19,117 | INFO     | chi2: 3.3512208958684937
[2025-11-24 11:36:52] 2025-11-24 10:36:19,117 | INFO     | current chi2=3.3512208958684937 (change=41.594508229835434 %)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,118 | INFO     | sum of square deviations: 94098733607.51799
[2025-11-24 11:36:52] 2025-11-24 10:36:19,133 | INFO     | sum of deviations: 1047095167723.5713
[2025-11-24 11:36:52] 2025-11-24 10:36:19,133 | INFO     | mean x: 1763960052.4732144
[2025-11-24 11:36:52] 2025-11-24 10:36:19,133 | INFO     | mean y: 3624310.476190476
[2025-11-24 11:36:52] 2025-11-24 10:36:19,133 | INFO     | intersect: -19625056928.806206
[2025-11-24 11:36:52] 2025-11-24 10:36:19,134 | INFO     | chi2: 3.2166675290683564
[2025-11-24 11:36:52] 2025-11-24 10:36:19,135 | INFO     | current chi2=3.2166675290683564 (change=4.015055139039612 %)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,135 | INFO     | left removable region: 20
[2025-11-24 11:36:52] 2025-11-24 10:36:19,136 | INFO     | sum of square deviations: 85550146871.90163
[2025-11-24 11:36:52] 2025-11-24 10:36:19,146 | INFO     | time since job start (41634s) is within the limit (172800.0s)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,150 | INFO     | sum of deviations: 1227316508706.6375
[2025-11-24 11:36:52] 2025-11-24 10:36:19,150 | INFO     | mean x: 1763960021.9877112
[2025-11-24 11:36:52] 2025-11-24 10:36:19,150 | INFO     | mean y: 3656862.079877112
[2025-11-24 11:36:52] 2025-11-24 10:36:19,151 | INFO     | intersect: -25302404376.198376
[2025-11-24 11:36:52] 2025-11-24 10:36:19,152 | INFO     | chi2: 0.256913744962408
[2025-11-24 11:36:52] 2025-11-24 10:36:19,152 | INFO     | current memory leak: 14.35 B/s (using 651 data points, chi2=0.26)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,153 | INFO     | could have reported an average CPU frequency of 2802 MHz (26 samples)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,153 | INFO     | ..............................
[2025-11-24 11:36:52] 2025-11-24 10:36:19,153 | INFO     | . Timing measurements:
[2025-11-24 11:36:52] 2025-11-24 10:36:19,153 | INFO     | . get job = 0 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,154 | INFO     | . initial setup = 1 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,154 | INFO     | . payload setup = 8 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,154 | INFO     | . stage-in = 0 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,154 | INFO     | . payload execution = 41594 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,154 | INFO     | . stage-out = 2 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,154 | INFO     | . log creation = 0 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,154 | INFO     | ..............................
[2025-11-24 11:36:52] 2025-11-24 10:36:19,309 | INFO     | 
[2025-11-24 11:36:52] 2025-11-24 10:36:19,310 | INFO     | job summary report
[2025-11-24 11:36:52] 2025-11-24 10:36:19,310 | INFO     | --------------------------------------------------
[2025-11-24 11:36:52] 2025-11-24 10:36:19,310 | INFO     | PanDA job id: 6895337537
[2025-11-24 11:36:52] 2025-11-24 10:36:19,310 | INFO     | task id: 47556137
[2025-11-24 11:36:52] 2025-11-24 10:36:19,310 | INFO     | errors: (none)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 11:36:52] 2025-11-24 10:36:19,311 | INFO     | pilot state: finished 
[2025-11-24 11:36:52] 2025-11-24 10:36:19,311 | INFO     | transexitcode: 0
[2025-11-24 11:36:52] 2025-11-24 10:36:19,311 | INFO     | exeerrorcode: 0
[2025-11-24 11:36:52] 2025-11-24 10:36:19,311 | INFO     | exeerrordiag: 
[2025-11-24 11:36:52] 2025-11-24 10:36:19,311 | INFO     | exitcode: 0
[2025-11-24 11:36:52] 2025-11-24 10:36:19,311 | INFO     | exitmsg: OK
[2025-11-24 11:36:52] 2025-11-24 10:36:19,312 | INFO     | cpuconsumptiontime: 485892 s
[2025-11-24 11:36:52] 2025-11-24 10:36:19,312 | INFO     | nevents: 1000
[2025-11-24 11:36:52] 2025-11-24 10:36:19,312 | INFO     | neventsw: 0
[2025-11-24 11:36:52] 2025-11-24 10:36:19,312 | INFO     | pid: 1172567
[2025-11-24 11:36:52] 2025-11-24 10:36:19,312 | INFO     | pgrp: 1172567
[2025-11-24 11:36:52] 2025-11-24 10:36:19,312 | INFO     | corecount: 12
[2025-11-24 11:36:52] 2025-11-24 10:36:19,313 | INFO     | event service: False
[2025-11-24 11:36:52] 2025-11-24 10:36:19,313 | INFO     | sizes: {0: 2297927, 1: 2298783, 2: 2298783, 6: 2299073, 12: 2299101, 41607: 2342759, 41611: 2351809, 41617: 2351999}
[2025-11-24 11:36:52] 2025-11-24 10:36:19,313 | INFO     | --------------------------------------------------
[2025-11-24 11:36:52] 2025-11-24 10:36:19,313 | INFO     | 
[2025-11-24 11:36:52] 2025-11-24 10:36:19,313 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-24 11:36:52] 2025-11-24 10:36:19,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 11:36:52] 2025-11-24 10:36:19,339 | INFO     | job 6895337537 has completed (purged errors)
[2025-11-24 11:36:52] 2025-11-24 10:36:19,339 | INFO     | overall cleanup function is called
[2025-11-24 11:36:52] 2025-11-24 10:36:20,362 | INFO     | --- collectZombieJob: --- 10, [1172567]
[2025-11-24 11:36:52] 2025-11-24 10:36:20,362 | INFO     | zombie collector waiting for pid 1172567
[2025-11-24 11:36:52] 2025-11-24 10:36:20,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 11:36:52] 2025-11-24 10:36:20,363 | INFO     | collected zombie processes
[2025-11-24 11:36:52] 2025-11-24 10:36:20,363 | INFO     | will attempt to kill all subprocesses of pid=1172567
[2025-11-24 11:36:52] 2025-11-24 10:36:20,559 | INFO     | process IDs to be killed: [1172567] (in reverse order)
[2025-11-24 11:36:52] 2025-11-24 10:36:20,623 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 11:36:52] 2025-11-24 10:36:20,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 11:36:52] 2025-11-24 10:36:20,630 | INFO     | did not find any defunct processes belonging to 1172567
[2025-11-24 11:36:52] 2025-11-24 10:36:20,637 | INFO     | did not find any defunct processes belonging to 1172567
[2025-11-24 11:36:52] 2025-11-24 10:36:20,639 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 11:36:52] 2025-11-24 10:36:20,639 | INFO     | ready for new job
[2025-11-24 11:36:52] 2025-11-24 10:36:20,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 11:36:52] 2025-11-24 10:36:20,642 | INFO     | ***************************************
[2025-11-24 11:36:52] 2025-11-24 10:36:20,643 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 11:36:52] 2025-11-24 10:36:20,643 | INFO     | ***************************************
[2025-11-24 11:36:52] 2025-11-24 10:36:20,643 | INFO     | 
[2025-11-24 11:36:52] 2025-11-24 10:36:20,644 | INFO     | architecture information:
[2025-11-24 11:36:52] 2025-11-24 10:36:20,645 | INFO     | executing command: cat /etc/os-release
[2025-11-24 11:36:52] 2025-11-24 10:36:20,658 | INFO     | cat /etc/os-release:
[2025-11-24 11:36:52] NAME="CentOS Linux"
[2025-11-24 11:36:52] VERSION="7 (Core)"
[2025-11-24 11:36:52] ID="centos"
[2025-11-24 11:36:52] ID_LIKE="rhel fedora"
[2025-11-24 11:36:52] VERSION_ID="7"
[2025-11-24 11:36:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 11:36:52] ANSI_COLOR="0;31"
[2025-11-24 11:36:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 11:36:52] HOME_URL="https://www.centos.org/"
[2025-11-24 11:36:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 11:36:52] 
[2025-11-24 11:36:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 11:36:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 11:36:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 11:36:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 11:36:52] 
[2025-11-24 11:36:52] 2025-11-24 10:36:20,658 | INFO     | ***************************************
[2025-11-24 11:36:52] 2025-11-24 10:36:21,161 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-24 11:36:52] 2025-11-24 10:36:21,179 | INFO     | sufficient remaining disk space (1812884094976 B)
[2025-11-24 11:36:52] 2025-11-24 10:36:21,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 11:36:52] 2025-11-24 10:36:21,180 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 11:36:52] 2025-11-24 10:36:21,180 | INFO     | update_server=False
[2025-11-24 11:36:52] 2025-11-24 10:36:21,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 11:36:52] 2025-11-24 10:36:21,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 11:36:52] 2025-11-24 10:36:21,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:36:52] 2025-11-24 10:36:21,359 | INFO     | all payload control threads have been joined
[2025-11-24 11:36:52] 2025-11-24 10:36:21,662 | INFO     | all job control threads have been joined
[2025-11-24 11:36:52] 2025-11-24 10:36:21,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:36:52] 2025-11-24 10:36:21,901 | INFO     | aborting loop
[2025-11-24 11:36:52] 2025-11-24 10:36:21,940 | INFO     | all data control threads have been joined
[2025-11-24 11:36:52] 2025-11-24 10:36:22,186 | INFO     | [job] retrieve thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,187 | INFO     | [job] queue monitor thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,363 | INFO     | [payload] control thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,380 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,452 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,586 | INFO     | [data] copytool_in thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,663 | INFO     | [job] control thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,838 | INFO     | [job] validate thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,906 | INFO     | [job] job monitor thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,923 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:22,945 | INFO     | [data] control thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:23,186 | INFO     | [data] copytool_out thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:23,286 | INFO     | [payload] failed_post thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:23,429 | INFO     | [payload] validate_post thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:23,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 11:36:52] 2025-11-24 10:36:27,842 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:31,939 | INFO     | job.realtimelogging is not enabled
[2025-11-24 11:36:52] 2025-11-24 10:36:32,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 11:36:52] 2025-11-24 10:36:34,750 | INFO     | [monitor] cgroup control has ended
[2025-11-24 11:36:52] 2025-11-24 10:36:35,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754861004608)>', '<ExcThread(monitor, started 139754318317312)>']
[2025-11-24 11:36:52] 2025-11-24 10:36:40,914 | INFO     | all workflow threads have been joined
[2025-11-24 11:36:52] 2025-11-24 10:36:40,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 11:36:52] 2025-11-24 10:36:40,914 | INFO     | traces error code: 0
[2025-11-24 11:36:52] 2025-11-24 10:36:40,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 11:36:52] 2025-11-24 10:36:52,462 | INFO     | PID=1164950 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 11:36:52] 2025-11-24 10:36:52,462 | INFO     | .. there are 2 such processes running
[2025-11-24 11:36:52] 2025-11-24 10:36:52,463 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 11:36:52] 2025-11-24 10:36:52,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 11:36:52] 2025-11-24 10:36:52,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 11:36:52] 2025-11-24 10:36:52,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 11:36:52] 2025-11-24 10:36:52,464 | INFO     | [monitor] control thread has ended
[2025-11-24 11:36:52] 2025-11-24 10:36:52,598 [wrapper] ==== pilot stdout END ====
[2025-11-24 11:36:52] 2025-11-24 10:36:52,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 11:36:52] 2025-11-24 10:36:52,603 [wrapper] pilotpid: 1164950
[2025-11-24 11:36:52] 2025-11-24 10:36:52,606 [wrapper] Pilot exit status: 0
[2025-11-24 11:36:52] 2025-11-24 10:36:52,615 [wrapper] pandaids: 6895337537
[2025-11-24 11:36:52] 2025-11-24 10:36:52,650 [wrapper] cleanup supervisor_pilot 1401709 1164951
[2025-11-24 11:36:52] 2025-11-24 10:36:52,653 [wrapper] Test setup, not cleaning
[2025-11-24 11:36:52] 2025-11-24 10:36:52,656 [wrapper] apfmon messages muted
[2025-11-24 11:36:52] 2025-11-24 10:36:52,658 [wrapper] ==== wrapper stdout END ====
[2025-11-24 11:36:52] 2025-11-24 10:36:52,661 [wrapper] ==== wrapper stderr END ====
[2025-11-24 11:36:52]  *** Error codes and diagnostics ***
[2025-11-24 11:36:52]     "exeErrorCode": 0,
[2025-11-24 11:36:52]     "exeErrorDiag": "",
[2025-11-24 11:36:52]     "pilotErrorCode": 0,
[2025-11-24 11:36:52]     "pilotErrorDiag": "",
[2025-11-24 11:36:52]  *** Listing of results directory ***
[2025-11-24 11:36:52] total 1302120
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc    576529 Nov 22 08:52 pilot3.tar.gz
[2025-11-24 11:36:52] -rwx------ 1 boinc boinc     36292 Nov 22 09:14 runpilot2-wrapper.sh
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc      5112 Nov 22 09:14 queuedata.json
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 11:36:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 00:02 run_atlas
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc       105 Nov 24 00:02 job.xml
[2025-11-24 11:36:52] -rw-r--r-- 2 boinc boinc 409200132 Nov 24 00:02 EVNT.47483658._000312.pool.root.1
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc      6296 Nov 24 00:02 init_data.xml
[2025-11-24 11:36:52] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 11:36:52] drwxrwx--x 2 boinc boinc        68 Nov 24 00:02 shared
[2025-11-24 11:36:52] -rw-r--r-- 2 boinc boinc    590092 Nov 24 00:02 input.tar.gz
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc         0 Nov 24 00:02 boinc_lockfile
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc      2784 Nov 24 00:02 pandaJob.out
[2025-11-24 11:36:52] -rw------- 1 boinc boinc    989786 Nov 24 00:02 agis_schedconf.cvmfs.json
[2025-11-24 11:36:52] drwx------ 5 boinc boinc      4096 Nov 24 00:02 pilot3
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc       533 Nov 24 11:25 boinc_task_state.xml
[2025-11-24 11:36:52] -rw------- 1 boinc boinc 903928468 Nov 24 11:35 HITS.47556137._003082.pool.root.1
[2025-11-24 11:36:52] -rw------- 1 boinc boinc      1038 Nov 24 11:36 memory_monitor_summary.json
[2025-11-24 11:36:52] -rw------- 1 boinc boinc   1526164 Nov 24 11:36 agis_ddmendpoints.agis.ALL.json
[2025-11-24 11:36:52] -rw------- 1 boinc boinc   2387247 Nov 24 11:36 log.47556137._003082.job.log.tgz.1
[2025-11-24 11:36:52] -rw------- 1 boinc boinc      8624 Nov 24 11:36 heartbeat.json
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc      8192 Nov 24 11:36 boinc_mmap_file
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc        29 Nov 24 11:36 wrapper_checkpoint.txt
[2025-11-24 11:36:52] -rw------- 1 boinc boinc        95 Nov 24 11:36 pilot_heartbeat.json
[2025-11-24 11:36:52] -rw------- 1 boinc boinc       822 Nov 24 11:36 pilotlog.txt
[2025-11-24 11:36:52] -rw------- 1 boinc boinc   5782214 Nov 24 11:36 log.47556137._003082.job.log.1
[2025-11-24 11:36:52] -rw------- 1 boinc boinc       353 Nov 24 11:36 output.list
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc       620 Nov 24 11:36 runtime_log
[2025-11-24 11:36:52] -rw------- 1 boinc boinc   8192000 Nov 24 11:36 result.tar.gz
[2025-11-24 11:36:52] -rw------- 1 boinc boinc       665 Nov 24 11:36 pyMMDmawxg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmD3JKDm6z2Vcm.diag
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc      8842 Nov 24 11:36 runtime_log.err
[2025-11-24 11:36:52] -rw-r--r-- 1 boinc boinc     21408 Nov 24 11:36 stderr.txt
[2025-11-24 11:36:52] HITS file was successfully produced:
[2025-11-24 11:36:52] -rw------- 1 boinc boinc 903928468 Nov 24 11:35 shared/HITS.pool.root.1
[2025-11-24 11:36:52]  *** Contents of shared directory: ***
[2025-11-24 11:36:52] total 1290952
[2025-11-24 11:36:52] -rw-r--r-- 2 boinc boinc 409200132 Nov 24 00:02 ATLAS.root_0
[2025-11-24 11:36:52] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 11:36:52] -rw-r--r-- 2 boinc boinc    590092 Nov 24 00:02 input.tar.gz
[2025-11-24 11:36:52] -rw------- 1 boinc boinc 903928468 Nov 24 11:35 HITS.pool.root.1
[2025-11-24 11:36:52] -rw------- 1 boinc boinc   8192000 Nov 24 11:36 result.tar.gz
11:36:54 (1161092): run_atlas exited; CPU time 486268.279202
11:36:54 (1161092): called boinc_finish(0)

</stderr_txt>
]]>

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